Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte19a01
         (654 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ067178-1|AAZ20250.1|  448|Apis mellifera conserved ATPase doma...    23   3.4  
AB208107-1|BAE72139.1|   71|Apis mellifera Broad complex zinc fi...    22   4.5  
DQ325083-1|ABD14097.1|  189|Apis mellifera complementary sex det...    21   7.9  
DQ325082-1|ABD14096.1|  179|Apis mellifera complementary sex det...    21   7.9  
DQ325081-1|ABD14095.1|  186|Apis mellifera complementary sex det...    21   7.9  
DQ325080-1|ABD14094.1|  184|Apis mellifera complementary sex det...    21   7.9  
DQ325079-1|ABD14093.1|  184|Apis mellifera complementary sex det...    21   7.9  
DQ325078-1|ABD14092.1|  184|Apis mellifera complementary sex det...    21   7.9  
AY350617-1|AAQ57659.1|  428|Apis mellifera complementary sex det...    21   7.9  

>DQ067178-1|AAZ20250.1|  448|Apis mellifera conserved ATPase domain
           protein protein.
          Length = 448

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 12/36 (33%), Positives = 20/36 (55%)
 Frame = -3

Query: 211 YLGSKRYVHNFPCQAFAHSVQSIMNVVLTEYEFGEF 104
           +  S + + N   QAFAHS Q I++  L  ++  E+
Sbjct: 10  FANSVKELRNLAQQAFAHSNQLIIDKSLKGWKEVEY 45


>AB208107-1|BAE72139.1|   71|Apis mellifera Broad complex zinc
           finger domain-Z2 isoform protein.
          Length = 71

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = +1

Query: 280 KISLRRHVR*AHSEKLRYYSYAI 348
           K SL+RHV   H+E+   Y   I
Sbjct: 18  KASLKRHVADKHAERQEEYRCVI 40


>DQ325083-1|ABD14097.1|  189|Apis mellifera complementary sex
           determiner protein.
          Length = 189

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = +1

Query: 562 IMKIRNATLNPQSNYKYQH 618
           I  + N T++  +NYKY +
Sbjct: 82  ISSLSNKTIHNNNNYKYNY 100


>DQ325082-1|ABD14096.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = +1

Query: 562 IMKIRNATLNPQSNYKYQH 618
           I  + N T++  +NYKY +
Sbjct: 82  ISSLSNKTIHNNNNYKYNY 100


>DQ325081-1|ABD14095.1|  186|Apis mellifera complementary sex
           determiner protein.
          Length = 186

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = +1

Query: 562 IMKIRNATLNPQSNYKYQH 618
           I  + N T++  +NYKY +
Sbjct: 82  ISSLSNRTIHNNNNYKYNY 100


>DQ325080-1|ABD14094.1|  184|Apis mellifera complementary sex
           determiner protein.
          Length = 184

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = +1

Query: 562 IMKIRNATLNPQSNYKYQH 618
           I  + N T++  +NYKY +
Sbjct: 82  ISSLSNKTIHNNNNYKYNY 100


>DQ325079-1|ABD14093.1|  184|Apis mellifera complementary sex
           determiner protein.
          Length = 184

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = +1

Query: 562 IMKIRNATLNPQSNYKYQH 618
           I  + N T++  +NYKY +
Sbjct: 82  ISSLSNKTIHNNNNYKYNY 100


>DQ325078-1|ABD14092.1|  184|Apis mellifera complementary sex
           determiner protein.
          Length = 184

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = +1

Query: 562 IMKIRNATLNPQSNYKYQH 618
           I  + N T++  +NYKY +
Sbjct: 82  ISSLSNKTIHNNNNYKYNY 100


>AY350617-1|AAQ57659.1|  428|Apis mellifera complementary sex
           determiner protein.
          Length = 428

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = +1

Query: 562 IMKIRNATLNPQSNYKYQH 618
           I  + N T++  +NYKY +
Sbjct: 315 ISSLSNKTIHNNNNYKYNY 333


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 193,197
Number of Sequences: 438
Number of extensions: 4390
Number of successful extensions: 12
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19804986
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)