Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte18p23
         (367 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY051796-1|AAK93220.1|  800|Drosophila melanogaster LD31211p pro...    29   1.4  
AJ238970-1|CAB53186.1|  800|Drosophila melanogaster cap binding ...    29   1.4  
AE014298-657|AAF45970.1|  800|Drosophila melanogaster CG7035-PB,...    29   1.4  
AE014298-656|AAN09124.1|  800|Drosophila melanogaster CG7035-PA,...    29   1.4  
AE014297-4154|AAF56730.2|  445|Drosophila melanogaster CG31058-P...    28   4.3  
AY061125-1|AAL28673.1| 1637|Drosophila melanogaster LD10743p pro...    27   10.0 
AL050231-2|CAB65850.1| 1624|Drosophila melanogaster EG:BACR37P7....    27   10.0 
AE014298-5|AAF45487.2| 1637|Drosophila melanogaster CG2995-PA pr...    27   10.0 

>AY051796-1|AAK93220.1|  800|Drosophila melanogaster LD31211p
           protein.
          Length = 800

 Score = 29.5 bits (63), Expect = 1.4
 Identities = 22/74 (29%), Positives = 36/74 (48%)
 Frame = -2

Query: 294 FLRLDQLNSP*ARHCSYGPFLIDICLQDIWTP*WLLPKVLYYPEESVKLKIIFIRMRFGS 115
           F  L  + +P      YG  LI++C     T    LP+VL    E     I+F+R+   +
Sbjct: 359 FAELFHMPTPRYLDICYGSILIELCKLQPAT----LPQVLAQATE-----ILFMRIDSMN 409

Query: 114 SFCFDFHINFWTIH 73
           + CFD  +N+++ H
Sbjct: 410 TSCFDRFVNWFSYH 423


>AJ238970-1|CAB53186.1|  800|Drosophila melanogaster cap binding
           protein 80 protein.
          Length = 800

 Score = 29.5 bits (63), Expect = 1.4
 Identities = 22/74 (29%), Positives = 36/74 (48%)
 Frame = -2

Query: 294 FLRLDQLNSP*ARHCSYGPFLIDICLQDIWTP*WLLPKVLYYPEESVKLKIIFIRMRFGS 115
           F  L  + +P      YG  LI++C     T    LP+VL    E     I+F+R+   +
Sbjct: 359 FAELFHMPTPRYLDICYGSILIELCKLQPAT----LPQVLAQATE-----ILFMRIDSMN 409

Query: 114 SFCFDFHINFWTIH 73
           + CFD  +N+++ H
Sbjct: 410 TSCFDRFVNWFSYH 423


>AE014298-657|AAF45970.1|  800|Drosophila melanogaster CG7035-PB,
           isoform B protein.
          Length = 800

 Score = 29.5 bits (63), Expect = 1.4
 Identities = 22/74 (29%), Positives = 36/74 (48%)
 Frame = -2

Query: 294 FLRLDQLNSP*ARHCSYGPFLIDICLQDIWTP*WLLPKVLYYPEESVKLKIIFIRMRFGS 115
           F  L  + +P      YG  LI++C     T    LP+VL    E     I+F+R+   +
Sbjct: 359 FAELFHMPTPRYLDICYGSILIELCKLQPAT----LPQVLAQATE-----ILFMRIDSMN 409

Query: 114 SFCFDFHINFWTIH 73
           + CFD  +N+++ H
Sbjct: 410 TSCFDRFVNWFSYH 423


>AE014298-656|AAN09124.1|  800|Drosophila melanogaster CG7035-PA,
           isoform A protein.
          Length = 800

 Score = 29.5 bits (63), Expect = 1.4
 Identities = 22/74 (29%), Positives = 36/74 (48%)
 Frame = -2

Query: 294 FLRLDQLNSP*ARHCSYGPFLIDICLQDIWTP*WLLPKVLYYPEESVKLKIIFIRMRFGS 115
           F  L  + +P      YG  LI++C     T    LP+VL    E     I+F+R+   +
Sbjct: 359 FAELFHMPTPRYLDICYGSILIELCKLQPAT----LPQVLAQATE-----ILFMRIDSMN 409

Query: 114 SFCFDFHINFWTIH 73
           + CFD  +N+++ H
Sbjct: 410 TSCFDRFVNWFSYH 423


>AE014297-4154|AAF56730.2|  445|Drosophila melanogaster CG31058-PA
           protein.
          Length = 445

 Score = 27.9 bits (59), Expect = 4.3
 Identities = 14/41 (34%), Positives = 21/41 (51%)
 Frame = -1

Query: 310 NNRSILSSPRPVKFAIGTSLFIRSISNRYLPPRYMDTMMAP 188
           N+R  LSSP P   +I  + ++R   N  LPP+    +  P
Sbjct: 169 NSRPTLSSPNPKLQSIPNTEYVRPPQNFVLPPQMRPAVGPP 209


>AY061125-1|AAL28673.1| 1637|Drosophila melanogaster LD10743p protein.
          Length = 1637

 Score = 26.6 bits (56), Expect = 10.0
 Identities = 14/48 (29%), Positives = 21/48 (43%), Gaps = 4/48 (8%)
 Frame = -2

Query: 192  LLPKVLYYPEESVKL-KIIFIRMR---FGSSFCFDFHINFWTIHKIFC 61
            +LP  ++Y  +  +  KI F   R    G   CFD+   FW +    C
Sbjct: 1542 VLPVRVFYEHQDYRFPKIAFFSCRDIDAGEEICFDYGEKFWRVEHRSC 1589


>AL050231-2|CAB65850.1| 1624|Drosophila melanogaster EG:BACR37P7.2
            protein.
          Length = 1624

 Score = 26.6 bits (56), Expect = 10.0
 Identities = 14/48 (29%), Positives = 21/48 (43%), Gaps = 4/48 (8%)
 Frame = -2

Query: 192  LLPKVLYYPEESVKL-KIIFIRMR---FGSSFCFDFHINFWTIHKIFC 61
            +LP  ++Y  +  +  KI F   R    G   CFD+   FW +    C
Sbjct: 1529 VLPVRVFYEHQDYRFPKIAFFSCRDIDAGEEICFDYGEKFWRVEHRSC 1576


>AE014298-5|AAF45487.2| 1637|Drosophila melanogaster CG2995-PA
            protein.
          Length = 1637

 Score = 26.6 bits (56), Expect = 10.0
 Identities = 14/48 (29%), Positives = 21/48 (43%), Gaps = 4/48 (8%)
 Frame = -2

Query: 192  LLPKVLYYPEESVKL-KIIFIRMR---FGSSFCFDFHINFWTIHKIFC 61
            +LP  ++Y  +  +  KI F   R    G   CFD+   FW +    C
Sbjct: 1542 VLPVRVFYEHQDYRFPKIAFFSCRDIDAGEEICFDYGEKFWRVEHRSC 1589


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,557,027
Number of Sequences: 53049
Number of extensions: 264583
Number of successful extensions: 599
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 576
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 599
length of database: 24,988,368
effective HSP length: 76
effective length of database: 20,956,644
effective search space used: 943048980
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)