Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte18p09
         (621 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L41642-1|AAA85085.1|  773|Drosophila melanogaster lin19 protein ...    33   0.31 
BT010290-1|AAQ23608.1|  774|Drosophila melanogaster LD20253p pro...    33   0.31 
AF136343-1|AAD33676.1|  774|Drosophila melanogaster Cul-1 protein.     33   0.31 
AE013599-533|AAM68872.1|  774|Drosophila melanogaster CG1877-PD,...    33   0.31 
AE013599-532|AAM68871.1|  774|Drosophila melanogaster CG1877-PC,...    33   0.31 
AE013599-531|AAF59175.1|  774|Drosophila melanogaster CG1877-PB,...    33   0.31 
AE013599-530|AAF59174.1|  774|Drosophila melanogaster CG1877-PA,...    33   0.31 
U62892-1|AAC47284.1| 3351|Drosophila melanogaster retinoid- and ...    33   0.41 
AE014135-185|AAF59387.2| 3351|Drosophila melanogaster CG11064-PA...    33   0.41 
BT021465-1|AAX33613.1|  239|Drosophila melanogaster AT13050p pro...    29   5.1  
AF145625-1|AAD38600.1|  924|Drosophila melanogaster BcDNA.GH0496...    29   5.1  
AE014298-3155|AAN08997.1|  924|Drosophila melanogaster CG14476-P...    29   5.1  
AE014298-3154|AAN08996.1|  924|Drosophila melanogaster CG14476-P...    29   5.1  
AE014298-3153|AAN08995.1|  924|Drosophila melanogaster CG14476-P...    29   5.1  
AE014298-3152|AAF45432.1|  924|Drosophila melanogaster CG14476-P...    29   5.1  
AE014298-3151|AAG22460.1|  924|Drosophila melanogaster CG14476-P...    29   5.1  
AE014134-3066|AAF53780.1|  335|Drosophila melanogaster CG17564-P...    29   5.1  
BT015195-1|AAT94424.1| 1076|Drosophila melanogaster RE72245p pro...    29   6.7  
AY061178-1|AAL28726.1|  276|Drosophila melanogaster LD14687p pro...    29   6.7  
AF121361-3|AAD37505.1|  277|Drosophila melanogaster zinc finger ...    29   6.7  
AF121360-1|AAD34351.1|  277|Drosophila melanogaster DNZDHHC/NEW1...    29   6.7  
AE014134-1980|AAF53025.1|  276|Drosophila melanogaster CG6627-PA...    29   6.7  
AE013599-3376|AAM68221.1| 1076|Drosophila melanogaster CG5820-PD...    29   6.7  

>L41642-1|AAA85085.1|  773|Drosophila melanogaster lin19 protein
           protein.
          Length = 773

 Score = 33.1 bits (72), Expect = 0.31
 Identities = 27/107 (25%), Positives = 51/107 (47%), Gaps = 7/107 (6%)
 Frame = +3

Query: 144 NNVENLKENLIEVQQVLDKLLPLKKNYDKMSLPAQIELDLFFVY-------TLNSLHWIH 302
           +N +  +ENLI+V Q+L K   L  + ++ SL  +  ++LF  Y        +N      
Sbjct: 629 DNTQTQQENLIQVLQILLKAKVLTSSDNENSLTPESTVELFLDYKNKKRRININQPLKTE 688

Query: 303 LRTKGIDPTKHPIKDELLRIKATMLKWQEVKDRQKRPTVNVEVAKRL 443
           L+ +     KH  +D  L I+A +++  +++ R     +  EV  +L
Sbjct: 689 LKVEQETVHKHIEEDRKLLIQAAIVRIMKMRKRLNHTNLISEVLNQL 735


>BT010290-1|AAQ23608.1|  774|Drosophila melanogaster LD20253p
           protein.
          Length = 774

 Score = 33.1 bits (72), Expect = 0.31
 Identities = 27/107 (25%), Positives = 51/107 (47%), Gaps = 7/107 (6%)
 Frame = +3

Query: 144 NNVENLKENLIEVQQVLDKLLPLKKNYDKMSLPAQIELDLFFVY-------TLNSLHWIH 302
           +N +  +ENLI+V Q+L K   L  + ++ SL  +  ++LF  Y        +N      
Sbjct: 630 DNTQTQQENLIQVLQILLKAKVLTSSDNENSLTPESTVELFLDYKNKKRRININQPLKTE 689

Query: 303 LRTKGIDPTKHPIKDELLRIKATMLKWQEVKDRQKRPTVNVEVAKRL 443
           L+ +     KH  +D  L I+A +++  +++ R     +  EV  +L
Sbjct: 690 LKVEQETVHKHIEEDRKLLIQAAIVRIMKMRKRLNHTNLISEVLNQL 736


>AF136343-1|AAD33676.1|  774|Drosophila melanogaster Cul-1 protein.
          Length = 774

 Score = 33.1 bits (72), Expect = 0.31
 Identities = 27/107 (25%), Positives = 51/107 (47%), Gaps = 7/107 (6%)
 Frame = +3

Query: 144 NNVENLKENLIEVQQVLDKLLPLKKNYDKMSLPAQIELDLFFVY-------TLNSLHWIH 302
           +N +  +ENLI+V Q+L K   L  + ++ SL  +  ++LF  Y        +N      
Sbjct: 630 DNTQTQQENLIQVLQILLKAKVLTSSDNENSLTPESTVELFLDYKNKKRRININQPLKTE 689

Query: 303 LRTKGIDPTKHPIKDELLRIKATMLKWQEVKDRQKRPTVNVEVAKRL 443
           L+ +     KH  +D  L I+A +++  +++ R     +  EV  +L
Sbjct: 690 LKVEQETVHKHIEEDRKLLIQAAIVRIMKMRKRLNHTNLISEVLNQL 736


>AE013599-533|AAM68872.1|  774|Drosophila melanogaster CG1877-PD,
           isoform D protein.
          Length = 774

 Score = 33.1 bits (72), Expect = 0.31
 Identities = 27/107 (25%), Positives = 51/107 (47%), Gaps = 7/107 (6%)
 Frame = +3

Query: 144 NNVENLKENLIEVQQVLDKLLPLKKNYDKMSLPAQIELDLFFVY-------TLNSLHWIH 302
           +N +  +ENLI+V Q+L K   L  + ++ SL  +  ++LF  Y        +N      
Sbjct: 630 DNTQTQQENLIQVLQILLKAKVLTSSDNENSLTPESTVELFLDYKNKKRRININQPLKTE 689

Query: 303 LRTKGIDPTKHPIKDELLRIKATMLKWQEVKDRQKRPTVNVEVAKRL 443
           L+ +     KH  +D  L I+A +++  +++ R     +  EV  +L
Sbjct: 690 LKVEQETVHKHIEEDRKLLIQAAIVRIMKMRKRLNHTNLISEVLNQL 736


>AE013599-532|AAM68871.1|  774|Drosophila melanogaster CG1877-PC,
           isoform C protein.
          Length = 774

 Score = 33.1 bits (72), Expect = 0.31
 Identities = 27/107 (25%), Positives = 51/107 (47%), Gaps = 7/107 (6%)
 Frame = +3

Query: 144 NNVENLKENLIEVQQVLDKLLPLKKNYDKMSLPAQIELDLFFVY-------TLNSLHWIH 302
           +N +  +ENLI+V Q+L K   L  + ++ SL  +  ++LF  Y        +N      
Sbjct: 630 DNTQTQQENLIQVLQILLKAKVLTSSDNENSLTPESTVELFLDYKNKKRRININQPLKTE 689

Query: 303 LRTKGIDPTKHPIKDELLRIKATMLKWQEVKDRQKRPTVNVEVAKRL 443
           L+ +     KH  +D  L I+A +++  +++ R     +  EV  +L
Sbjct: 690 LKVEQETVHKHIEEDRKLLIQAAIVRIMKMRKRLNHTNLISEVLNQL 736


>AE013599-531|AAF59175.1|  774|Drosophila melanogaster CG1877-PB,
           isoform B protein.
          Length = 774

 Score = 33.1 bits (72), Expect = 0.31
 Identities = 27/107 (25%), Positives = 51/107 (47%), Gaps = 7/107 (6%)
 Frame = +3

Query: 144 NNVENLKENLIEVQQVLDKLLPLKKNYDKMSLPAQIELDLFFVY-------TLNSLHWIH 302
           +N +  +ENLI+V Q+L K   L  + ++ SL  +  ++LF  Y        +N      
Sbjct: 630 DNTQTQQENLIQVLQILLKAKVLTSSDNENSLTPESTVELFLDYKNKKRRININQPLKTE 689

Query: 303 LRTKGIDPTKHPIKDELLRIKATMLKWQEVKDRQKRPTVNVEVAKRL 443
           L+ +     KH  +D  L I+A +++  +++ R     +  EV  +L
Sbjct: 690 LKVEQETVHKHIEEDRKLLIQAAIVRIMKMRKRLNHTNLISEVLNQL 736


>AE013599-530|AAF59174.1|  774|Drosophila melanogaster CG1877-PA,
           isoform A protein.
          Length = 774

 Score = 33.1 bits (72), Expect = 0.31
 Identities = 27/107 (25%), Positives = 51/107 (47%), Gaps = 7/107 (6%)
 Frame = +3

Query: 144 NNVENLKENLIEVQQVLDKLLPLKKNYDKMSLPAQIELDLFFVY-------TLNSLHWIH 302
           +N +  +ENLI+V Q+L K   L  + ++ SL  +  ++LF  Y        +N      
Sbjct: 630 DNTQTQQENLIQVLQILLKAKVLTSSDNENSLTPESTVELFLDYKNKKRRININQPLKTE 689

Query: 303 LRTKGIDPTKHPIKDELLRIKATMLKWQEVKDRQKRPTVNVEVAKRL 443
           L+ +     KH  +D  L I+A +++  +++ R     +  EV  +L
Sbjct: 690 LKVEQETVHKHIEEDRKLLIQAAIVRIMKMRKRLNHTNLISEVLNQL 736


>U62892-1|AAC47284.1| 3351|Drosophila melanogaster retinoid- and fatty
            acid-bindingglycoprotein protein.
          Length = 3351

 Score = 32.7 bits (71), Expect = 0.41
 Identities = 15/40 (37%), Positives = 25/40 (62%)
 Frame = +3

Query: 99   WDFKYGELAKDKDFVNNVENLKENLIEVQQVLDKLLPLKK 218
            W     E+ KD ++++  EN+KE L + +QV DK++ L K
Sbjct: 2424 WHIVESEINKDSEYIS--ENIKERLKKSRQVTDKIVKLAK 2461


>AE014135-185|AAF59387.2| 3351|Drosophila melanogaster CG11064-PA
            protein.
          Length = 3351

 Score = 32.7 bits (71), Expect = 0.41
 Identities = 15/40 (37%), Positives = 25/40 (62%)
 Frame = +3

Query: 99   WDFKYGELAKDKDFVNNVENLKENLIEVQQVLDKLLPLKK 218
            W     E+ KD ++++  EN+KE L + +QV DK++ L K
Sbjct: 2424 WHIVESEINKDSEYIS--ENIKERLKKSRQVTDKIVKLAK 2461


>BT021465-1|AAX33613.1|  239|Drosophila melanogaster AT13050p
           protein.
          Length = 239

 Score = 29.1 bits (62), Expect = 5.1
 Identities = 25/83 (30%), Positives = 39/83 (46%)
 Frame = +3

Query: 120 LAKDKDFVNNVENLKENLIEVQQVLDKLLPLKKNYDKMSLPAQIELDLFFVYTLNSLHWI 299
           LAK KD +NN    KE  I+    L ++L  ++  D  S PA+ +LD      +  +  +
Sbjct: 157 LAKTKDAINNNYMDKERTIDAITNLHRILLRRR--DVHSFPARGDLDKVLDAIMGEVEIL 214

Query: 300 HLRTKGIDPTKHPIKDELLRIKA 368
               K I+ +   IK E  R K+
Sbjct: 215 TGVVKEIESSDPSIKHEEARDKS 237


>AF145625-1|AAD38600.1|  924|Drosophila melanogaster BcDNA.GH04962
           protein.
          Length = 924

 Score = 29.1 bits (62), Expect = 5.1
 Identities = 12/30 (40%), Positives = 20/30 (66%), Gaps = 3/30 (10%)
 Frame = +3

Query: 270 VYTLNSLHWI---HLRTKGIDPTKHPIKDE 350
           V ++N+ +W+   HLR K  +PT HP ++E
Sbjct: 153 VVSVNAKNWLYFEHLRQKAQEPTSHPAENE 182


>AE014298-3155|AAN08997.1|  924|Drosophila melanogaster CG14476-PE,
           isoform E protein.
          Length = 924

 Score = 29.1 bits (62), Expect = 5.1
 Identities = 12/30 (40%), Positives = 20/30 (66%), Gaps = 3/30 (10%)
 Frame = +3

Query: 270 VYTLNSLHWI---HLRTKGIDPTKHPIKDE 350
           V ++N+ +W+   HLR K  +PT HP ++E
Sbjct: 153 VVSVNAKNWLYFEHLRQKAQEPTSHPAENE 182


>AE014298-3154|AAN08996.1|  924|Drosophila melanogaster CG14476-PD,
           isoform D protein.
          Length = 924

 Score = 29.1 bits (62), Expect = 5.1
 Identities = 12/30 (40%), Positives = 20/30 (66%), Gaps = 3/30 (10%)
 Frame = +3

Query: 270 VYTLNSLHWI---HLRTKGIDPTKHPIKDE 350
           V ++N+ +W+   HLR K  +PT HP ++E
Sbjct: 153 VVSVNAKNWLYFEHLRQKAQEPTSHPAENE 182


>AE014298-3153|AAN08995.1|  924|Drosophila melanogaster CG14476-PC,
           isoform C protein.
          Length = 924

 Score = 29.1 bits (62), Expect = 5.1
 Identities = 12/30 (40%), Positives = 20/30 (66%), Gaps = 3/30 (10%)
 Frame = +3

Query: 270 VYTLNSLHWI---HLRTKGIDPTKHPIKDE 350
           V ++N+ +W+   HLR K  +PT HP ++E
Sbjct: 153 VVSVNAKNWLYFEHLRQKAQEPTSHPAENE 182


>AE014298-3152|AAF45432.1|  924|Drosophila melanogaster CG14476-PB,
           isoform B protein.
          Length = 924

 Score = 29.1 bits (62), Expect = 5.1
 Identities = 12/30 (40%), Positives = 20/30 (66%), Gaps = 3/30 (10%)
 Frame = +3

Query: 270 VYTLNSLHWI---HLRTKGIDPTKHPIKDE 350
           V ++N+ +W+   HLR K  +PT HP ++E
Sbjct: 153 VVSVNAKNWLYFEHLRQKAQEPTSHPAENE 182


>AE014298-3151|AAG22460.1|  924|Drosophila melanogaster CG14476-PA,
           isoform A protein.
          Length = 924

 Score = 29.1 bits (62), Expect = 5.1
 Identities = 12/30 (40%), Positives = 20/30 (66%), Gaps = 3/30 (10%)
 Frame = +3

Query: 270 VYTLNSLHWI---HLRTKGIDPTKHPIKDE 350
           V ++N+ +W+   HLR K  +PT HP ++E
Sbjct: 153 VVSVNAKNWLYFEHLRQKAQEPTSHPAENE 182


>AE014134-3066|AAF53780.1|  335|Drosophila melanogaster CG17564-PB
           protein.
          Length = 335

 Score = 29.1 bits (62), Expect = 5.1
 Identities = 25/83 (30%), Positives = 39/83 (46%)
 Frame = +3

Query: 120 LAKDKDFVNNVENLKENLIEVQQVLDKLLPLKKNYDKMSLPAQIELDLFFVYTLNSLHWI 299
           LAK KD +NN    KE  I+    L ++L  ++  D  S PA+ +LD      +  +  +
Sbjct: 253 LAKTKDAINNNYMDKERTIDAITNLHRILLRRR--DVHSFPARGDLDKVLDAIMGEVEIL 310

Query: 300 HLRTKGIDPTKHPIKDELLRIKA 368
               K I+ +   IK E  R K+
Sbjct: 311 TGVVKEIESSDPSIKHEEARDKS 333


>BT015195-1|AAT94424.1| 1076|Drosophila melanogaster RE72245p
           protein.
          Length = 1076

 Score = 28.7 bits (61), Expect = 6.7
 Identities = 22/74 (29%), Positives = 32/74 (43%)
 Frame = +3

Query: 222 YDKMSLPAQIELDLFFVYTLNSLHWIHLRTKGIDPTKHPIKDELLRIKATMLKWQEVKDR 401
           Y KMS  +   L L   +TL  +H  H  T G  P  H I D+L   +  +   +EV   
Sbjct: 23  YRKMSRQSTCRLVLLLAFTLALIHASHSNTVG--PKIHFIHDDL--TENELNSGEEVSPT 78

Query: 402 QKRPTVNVEVAKRL 443
           +  P ++    K L
Sbjct: 79  ESLPKISTPKVKDL 92


>AY061178-1|AAL28726.1|  276|Drosophila melanogaster LD14687p
           protein.
          Length = 276

 Score = 28.7 bits (61), Expect = 6.7
 Identities = 19/68 (27%), Positives = 27/68 (39%), Gaps = 2/68 (2%)
 Frame = -3

Query: 460 YRPFRTKRFATSTLTVGLFWRSFTSCHFNIVAFILSSSSLMGCF--VGSMPFVRKCIQCS 287
           Y  +   R+   T   G  W SF    FN V F+L+ S     F   G++P     +  S
Sbjct: 22  YADYVVIRWIILTTMPGSLWMSFHVVLFNTVVFLLAMSHSKAVFSDPGTVPLPANRLDFS 81

Query: 286 EFKVYTKN 263
           +     KN
Sbjct: 82  DLHTTNKN 89


>AF121361-3|AAD37505.1|  277|Drosophila melanogaster zinc finger
           protein protein.
          Length = 277

 Score = 28.7 bits (61), Expect = 6.7
 Identities = 19/68 (27%), Positives = 27/68 (39%), Gaps = 2/68 (2%)
 Frame = -3

Query: 460 YRPFRTKRFATSTLTVGLFWRSFTSCHFNIVAFILSSSSLMGCF--VGSMPFVRKCIQCS 287
           Y  +   R+   T   G  W SF    FN V F+L+ S     F   G++P     +  S
Sbjct: 22  YADYVVIRWIILTTMPGSLWMSFHVVLFNTVVFLLAMSHSKAVFSDPGTVPLPANRLDFS 81

Query: 286 EFKVYTKN 263
           +     KN
Sbjct: 82  DLHTTNKN 89


>AF121360-1|AAD34351.1|  277|Drosophila melanogaster DNZDHHC/NEW1
           zinc finger protein11 protein.
          Length = 277

 Score = 28.7 bits (61), Expect = 6.7
 Identities = 19/68 (27%), Positives = 27/68 (39%), Gaps = 2/68 (2%)
 Frame = -3

Query: 460 YRPFRTKRFATSTLTVGLFWRSFTSCHFNIVAFILSSSSLMGCF--VGSMPFVRKCIQCS 287
           Y  +   R+   T   G  W SF    FN V F+L+ S     F   G++P     +  S
Sbjct: 22  YADYVVIRWIILTTMPGSLWMSFHVVLFNTVVFLLAMSHSKAVFSDPGTVPLPANRLDFS 81

Query: 286 EFKVYTKN 263
           +     KN
Sbjct: 82  DLHTTNKN 89


>AE014134-1980|AAF53025.1|  276|Drosophila melanogaster CG6627-PA
           protein.
          Length = 276

 Score = 28.7 bits (61), Expect = 6.7
 Identities = 19/68 (27%), Positives = 27/68 (39%), Gaps = 2/68 (2%)
 Frame = -3

Query: 460 YRPFRTKRFATSTLTVGLFWRSFTSCHFNIVAFILSSSSLMGCF--VGSMPFVRKCIQCS 287
           Y  +   R+   T   G  W SF    FN V F+L+ S     F   G++P     +  S
Sbjct: 22  YADYVVIRWIILTTMPGSLWMSFHVVLFNTVVFLLAMSHSKAVFSDPGTVPLPANRLDFS 81

Query: 286 EFKVYTKN 263
           +     KN
Sbjct: 82  DLHTTNKN 89


>AE013599-3376|AAM68221.1| 1076|Drosophila melanogaster CG5820-PD,
           isoform D protein.
          Length = 1076

 Score = 28.7 bits (61), Expect = 6.7
 Identities = 22/74 (29%), Positives = 32/74 (43%)
 Frame = +3

Query: 222 YDKMSLPAQIELDLFFVYTLNSLHWIHLRTKGIDPTKHPIKDELLRIKATMLKWQEVKDR 401
           Y KMS  +   L L   +TL  +H  H  T G  P  H I D+L   +  +   +EV   
Sbjct: 23  YRKMSRQSTCRLVLLLAFTLALIHASHSNTVG--PKIHFIHDDL--TENELNSGEEVSPT 78

Query: 402 QKRPTVNVEVAKRL 443
           +  P ++    K L
Sbjct: 79  ESLPKISTPKVKDL 92


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,312,577
Number of Sequences: 53049
Number of extensions: 449497
Number of successful extensions: 1320
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 1259
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1320
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2559155400
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)