Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte18p08
(617 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL117202-20|CAB57898.4| 1205|Caenorhabditis elegans Hypothetical... 31 0.66
AF134186-1|AAD55361.1| 1359|Caenorhabditis elegans XNP-1 protein. 31 0.87
AF000196-11|AAC24256.1| 1359|Caenorhabditis elegans Human xnp ge... 31 0.87
AF000261-8|AAB52929.1| 376|Caenorhabditis elegans T box family ... 30 1.2
Z80214-1|CAB02262.1| 500|Caenorhabditis elegans Hypothetical pr... 30 1.5
U49945-4|AAC47924.1| 535|Caenorhabditis elegans Hypothetical pr... 28 6.1
Z73896-8|CAA98061.1| 525|Caenorhabditis elegans Hypothetical pr... 27 8.1
Z73422-12|CAJ76980.1| 525|Caenorhabditis elegans Hypothetical p... 27 8.1
Z73422-11|CAA97768.1| 423|Caenorhabditis elegans Hypothetical p... 27 8.1
Z73422-10|CAA97772.1| 525|Caenorhabditis elegans Hypothetical p... 27 8.1
Z69664-8|CAN86924.1| 1287|Caenorhabditis elegans Hypothetical pr... 27 8.1
Z69664-7|CAA93515.2| 1338|Caenorhabditis elegans Hypothetical pr... 27 8.1
U70850-3|AAB09122.3| 596|Caenorhabditis elegans Zinc finger plu... 27 8.1
AY289599-1|AAP43944.1| 596|Caenorhabditis elegans ZAG-1 protein. 27 8.1
AY224511-1|AAP37457.1| 596|Caenorhabditis elegans ZAG-1 protein. 27 8.1
>AL117202-20|CAB57898.4| 1205|Caenorhabditis elegans Hypothetical
protein Y47D3A.26 protein.
Length = 1205
Score = 31.1 bits (67), Expect = 0.66
Identities = 29/102 (28%), Positives = 50/102 (49%)
Frame = +1
Query: 226 DSALNVLPETKKKGIYVEKRNFAQKTQVTKRLKTLPNQITRRRDNKQFLSSVLNILSKGT 405
+ +L +L ETK K EK K + +RL+TL N+ + D K++ L K
Sbjct: 174 EESLKILKETKMK---TEKIQGLLK-YIDERLQTLENE---KEDLKEYQK-----LDKTK 221
Query: 406 TSTQFPEPAPDKSGEEIIPKTTKIERAKAMNNEKKSKFKSKI 531
S ++ D + +E I + TK++ K N+K + KS++
Sbjct: 222 RSVEYT--MYDNTNKEAIKEKTKLDEQKVELNQKDNNVKSQL 261
>AF134186-1|AAD55361.1| 1359|Caenorhabditis elegans XNP-1 protein.
Length = 1359
Score = 30.7 bits (66), Expect = 0.87
Identities = 29/129 (22%), Positives = 67/129 (51%), Gaps = 6/129 (4%)
Frame = +1
Query: 211 DKTLNDSALNVLPETKKKG-IYVEKRNFAQKTQVTK-RLKTLPNQITRRRDNKQFLSSVL 384
D+ +S + VLP+ KK+G + + + +K Q ++ + ++++++ KQ S
Sbjct: 291 DEESEESDVEVLPQKKKRGAVTLISDSEDEKDQKSESEASDVEEKVSKKKAKKQESSESG 350
Query: 385 NILSKGTTST---QFPEPAPDKSGEEIIPKTTKIERAKAMNNEKKSKFKSKILNRNYDD- 552
+ S+G+ + + P+K + II ++K+++ + ++ E+ K + K L + +
Sbjct: 351 SDSSEGSITVNRKSKKKEKPEKKKKGIIMDSSKLQK-ETIDAERAEKERRKRLEKKQKEF 409
Query: 553 NFIVLKINE 579
N IVL+ E
Sbjct: 410 NGIVLEEGE 418
>AF000196-11|AAC24256.1| 1359|Caenorhabditis elegans Human xnp gene
related protein 1 protein.
Length = 1359
Score = 30.7 bits (66), Expect = 0.87
Identities = 29/129 (22%), Positives = 67/129 (51%), Gaps = 6/129 (4%)
Frame = +1
Query: 211 DKTLNDSALNVLPETKKKG-IYVEKRNFAQKTQVTK-RLKTLPNQITRRRDNKQFLSSVL 384
D+ +S + VLP+ KK+G + + + +K Q ++ + ++++++ KQ S
Sbjct: 291 DEESEESDVEVLPQKKKRGAVTLISDSEDEKDQKSESEASDVEEKVSKKKAKKQESSESG 350
Query: 385 NILSKGTTST---QFPEPAPDKSGEEIIPKTTKIERAKAMNNEKKSKFKSKILNRNYDD- 552
+ S+G+ + + P+K + II ++K+++ + ++ E+ K + K L + +
Sbjct: 351 SDSSEGSITVNRKSKKKEKPEKKKKGIIMDSSKLQK-ETIDAERAEKERRKRLEKKQKEF 409
Query: 553 NFIVLKINE 579
N IVL+ E
Sbjct: 410 NGIVLEEGE 418
>AF000261-8|AAB52929.1| 376|Caenorhabditis elegans T box family
protein 18 protein.
Length = 376
Score = 30.3 bits (65), Expect = 1.2
Identities = 17/56 (30%), Positives = 26/56 (46%)
Frame = +1
Query: 382 LNILSKGTTSTQFPEPAPDKSGEEIIPKTTKIERAKAMNNEKKSKFKSKILNRNYD 549
L +S S+ FP AP+ S ++ PK + + +EKK K + L N D
Sbjct: 50 LPAVSSELLSSSFPTNAPESSSRDLAPKQNQFTINVVLFDEKKKKNPEENLPANGD 105
>Z80214-1|CAB02262.1| 500|Caenorhabditis elegans Hypothetical
protein C27D8.2 protein.
Length = 500
Score = 29.9 bits (64), Expect = 1.5
Identities = 17/65 (26%), Positives = 31/65 (47%)
Frame = +1
Query: 235 LNVLPETKKKGIYVEKRNFAQKTQVTKRLKTLPNQITRRRDNKQFLSSVLNILSKGTTST 414
+N P+T K VEK F +K + K+ K ++ T+++ + V N L++
Sbjct: 340 INTDPKTVKTERSVEKNKFKKKQKEEKKAKKQISKSTKKKSKCACIEYVKNKLTEKKKKN 399
Query: 415 QFPEP 429
F +P
Sbjct: 400 PFKDP 404
>U49945-4|AAC47924.1| 535|Caenorhabditis elegans Hypothetical
protein C02H7.1 protein.
Length = 535
Score = 27.9 bits (59), Expect = 6.1
Identities = 23/111 (20%), Positives = 52/111 (46%), Gaps = 2/111 (1%)
Frame = +1
Query: 250 ETKKKGIYVE-KRNFAQKTQVTKRLKTLPNQITRRRDNKQFLSSVLNILSKGTTSTQFPE 426
E KKK + E K+ ++ TK+ + + +++ S+ K ++S++
Sbjct: 121 EKKKKKVKKEDKKGDEEEKSTTKKRSSKKETHEEKEKSEKKKSAEEKEKKKKSSSSKERH 180
Query: 427 PAPDKSGEEIIPKTTK-IERAKAMNNEKKSKFKSKILNRNYDDNFIVLKIN 576
+ D+S E+ K++K ++ K+ +EK K K R++ ++ +N
Sbjct: 181 KSSDRSSEKSSEKSSKEKKKEKSTTDEKPKKSKKDPSERHFKRQDSMIAVN 231
>Z73896-8|CAA98061.1| 525|Caenorhabditis elegans Hypothetical
protein B0564.9 protein.
Length = 525
Score = 27.5 bits (58), Expect = 8.1
Identities = 22/49 (44%), Positives = 25/49 (51%), Gaps = 9/49 (18%)
Frame = -3
Query: 351 SPCDL--IWQRFQTFSHLCLLREVSLLD-------VNTFLLCLRQNIEG 232
SPCDL I T +HL L R V+LLD VN L L+ N EG
Sbjct: 332 SPCDLEHIVAMADTITHLDLSRSVNLLDCRQIAELVNLRHLSLKNNKEG 380
>Z73422-12|CAJ76980.1| 525|Caenorhabditis elegans Hypothetical
protein B0564.9 protein.
Length = 525
Score = 27.5 bits (58), Expect = 8.1
Identities = 22/49 (44%), Positives = 25/49 (51%), Gaps = 9/49 (18%)
Frame = -3
Query: 351 SPCDL--IWQRFQTFSHLCLLREVSLLD-------VNTFLLCLRQNIEG 232
SPCDL I T +HL L R V+LLD VN L L+ N EG
Sbjct: 332 SPCDLEHIVAMADTITHLDLSRSVNLLDCRQIAELVNLRHLSLKNNKEG 380
>Z73422-11|CAA97768.1| 423|Caenorhabditis elegans Hypothetical
protein B0564.6b protein.
Length = 423
Score = 27.5 bits (58), Expect = 8.1
Identities = 22/49 (44%), Positives = 25/49 (51%), Gaps = 9/49 (18%)
Frame = -3
Query: 351 SPCDL--IWQRFQTFSHLCLLREVSLLD-------VNTFLLCLRQNIEG 232
SPCDL I T +HL L R V+LLD VN L L+ N EG
Sbjct: 230 SPCDLEHIVAMADTITHLDLSRSVNLLDCRQIAELVNLRHLSLKNNKEG 278
>Z73422-10|CAA97772.1| 525|Caenorhabditis elegans Hypothetical
protein B0564.6a protein.
Length = 525
Score = 27.5 bits (58), Expect = 8.1
Identities = 22/49 (44%), Positives = 25/49 (51%), Gaps = 9/49 (18%)
Frame = -3
Query: 351 SPCDL--IWQRFQTFSHLCLLREVSLLD-------VNTFLLCLRQNIEG 232
SPCDL I T +HL L R V+LLD VN L L+ N EG
Sbjct: 332 SPCDLEHIVAMADTITHLDLSRSVNLLDCRQIAELVNLRHLSLKNNKEG 380
>Z69664-8|CAN86924.1| 1287|Caenorhabditis elegans Hypothetical
protein K04D7.5b protein.
Length = 1287
Score = 27.5 bits (58), Expect = 8.1
Identities = 9/24 (37%), Positives = 19/24 (79%)
Frame = +1
Query: 448 EEIIPKTTKIERAKAMNNEKKSKF 519
+E++P T+ I+ +++NN++ SKF
Sbjct: 762 KELMPSTSSIDSLESINNQETSKF 785
>Z69664-7|CAA93515.2| 1338|Caenorhabditis elegans Hypothetical
protein K04D7.5a protein.
Length = 1338
Score = 27.5 bits (58), Expect = 8.1
Identities = 9/24 (37%), Positives = 19/24 (79%)
Frame = +1
Query: 448 EEIIPKTTKIERAKAMNNEKKSKF 519
+E++P T+ I+ +++NN++ SKF
Sbjct: 762 KELMPSTSSIDSLESINNQETSKF 785
>U70850-3|AAB09122.3| 596|Caenorhabditis elegans Zinc finger plus
homeodomain, axonguidance protein 1 protein.
Length = 596
Score = 27.5 bits (58), Expect = 8.1
Identities = 21/83 (25%), Positives = 37/83 (44%), Gaps = 1/83 (1%)
Frame = +1
Query: 283 RNFAQKTQVTKRLKTLPNQITRRRDNKQFL-SSVLNILSKGTTSTQFPEPAPDKSGEEII 459
RN + Q T ++ LP+ D L +++ L GT+ T EP+ S E I
Sbjct: 97 RNIMLQLQ-TPQVSFLPSTAANNMDYMSLLQANLFQSLENGTSPTPTQEPSAPASPEPKI 155
Query: 460 PKTTKIERAKAMNNEKKSKFKSK 528
+ E + + E K++ K++
Sbjct: 156 EVVDEPEVSSEVKTEVKTEVKTE 178
>AY289599-1|AAP43944.1| 596|Caenorhabditis elegans ZAG-1 protein.
Length = 596
Score = 27.5 bits (58), Expect = 8.1
Identities = 21/83 (25%), Positives = 37/83 (44%), Gaps = 1/83 (1%)
Frame = +1
Query: 283 RNFAQKTQVTKRLKTLPNQITRRRDNKQFL-SSVLNILSKGTTSTQFPEPAPDKSGEEII 459
RN + Q T ++ LP+ D L +++ L GT+ T EP+ S E I
Sbjct: 97 RNIMLQLQ-TPQVSFLPSTAANNMDYMSLLQANLFQSLENGTSPTPTQEPSAPASPEPKI 155
Query: 460 PKTTKIERAKAMNNEKKSKFKSK 528
+ E + + E K++ K++
Sbjct: 156 EVVDEPEVSSEVKTEVKTEVKTE 178
>AY224511-1|AAP37457.1| 596|Caenorhabditis elegans ZAG-1 protein.
Length = 596
Score = 27.5 bits (58), Expect = 8.1
Identities = 21/83 (25%), Positives = 37/83 (44%), Gaps = 1/83 (1%)
Frame = +1
Query: 283 RNFAQKTQVTKRLKTLPNQITRRRDNKQFL-SSVLNILSKGTTSTQFPEPAPDKSGEEII 459
RN + Q T ++ LP+ D L +++ L GT+ T EP+ S E I
Sbjct: 97 RNIMLQLQ-TPQVSFLPSTAANNMDYMSLLQANLFQSLENGTSPTPTQEPSAPASPEPKI 155
Query: 460 PKTTKIERAKAMNNEKKSKFKSK 528
+ E + + E K++ K++
Sbjct: 156 EVVDEPEVSSEVKTEVKTEVKTE 178
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,524,427
Number of Sequences: 27780
Number of extensions: 213992
Number of successful extensions: 691
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 654
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 691
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1342816466
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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