Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte18p05
         (317 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.      26   0.13 
DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.          23   0.89 
DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein pr...    22   2.1  
DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chlor...    21   2.7  
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    21   3.6  
AB194707-1|BAD69622.1|  247|Apis mellifera heme oxygenase protein.     21   3.6  
AF004169-1|AAC13418.1|  371|Apis mellifera ultraviolet-sensitive...    20   6.3  
DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.           20   8.3  

>AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.
          Length = 429

 Score = 25.8 bits (54), Expect = 0.13
 Identities = 13/52 (25%), Positives = 23/52 (44%)
 Frame = +3

Query: 27  HNESSKSTKETKPAPPKITPSPCSSMQTLQKANSCTSCNETPTTKGPPSKRP 182
           H +  +S       P  +TP+P +  Q L++A    +   TP      +K+P
Sbjct: 143 HEKLVESFPRGGSLPTPVTPTPTTVQQLLRRAQIRRNERRTPDPHDETAKKP 194


>DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.
          Length = 495

 Score = 23.0 bits (47), Expect = 0.89
 Identities = 17/67 (25%), Positives = 25/67 (37%), Gaps = 4/67 (5%)
 Frame = +3

Query: 15  GAKGHNESSKSTKETKPAPPKITPS----PCSSMQTLQKANSCTSCNETPTTKGPPSKRP 182
           G +G  +S     ET+P    +T      P   +  +   N C   N T    GP + + 
Sbjct: 194 GTEGIAKSGDVLVETEPIYYNLTMVKLNWPKKRVTKMSSINPCIFDNATIVNNGPEAAKM 253

Query: 183 FSTFTVT 203
              FT T
Sbjct: 254 AKAFTYT 260


>DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein
           protein.
          Length = 484

 Score = 21.8 bits (44), Expect = 2.1
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = -1

Query: 182 GALTWWAFG 156
           G LT+WAFG
Sbjct: 75  GGLTYWAFG 83


>DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chloride
           channel protein.
          Length = 428

 Score = 21.4 bits (43), Expect = 2.7
 Identities = 10/26 (38%), Positives = 14/26 (53%)
 Frame = +3

Query: 36  SSKSTKETKPAPPKITPSPCSSMQTL 113
           S +S K T   PP  TP+  + M+ L
Sbjct: 374 SGRSQKSTTGPPPGPTPAQKARMRAL 399


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 21.0 bits (42), Expect = 3.6
 Identities = 11/26 (42%), Positives = 13/26 (50%)
 Frame = +3

Query: 42  KSTKETKPAPPKITPSPCSSMQTLQK 119
           KST    P P   TPS  S+  T +K
Sbjct: 557 KSTVSLLPLPLARTPSVMSASSTCKK 582


>AB194707-1|BAD69622.1|  247|Apis mellifera heme oxygenase protein.
          Length = 247

 Score = 21.0 bits (42), Expect = 3.6
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = -2

Query: 85  GVILGGAGLVSLVDFEDSLWPF 20
           G++ GG  L    +F   +WPF
Sbjct: 132 GLLSGGIILRKKREFMQKIWPF 153


>AF004169-1|AAC13418.1|  371|Apis mellifera ultraviolet-sensitive
           opsin protein.
          Length = 371

 Score = 20.2 bits (40), Expect = 6.3
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = +3

Query: 3   WIHPGAKGHNESSKSTKETKPAPP 74
           W+    K  ++S+ +T ET   PP
Sbjct: 345 WLELQEKPISDSTSTTTETVNTPP 368


>DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.
          Length = 552

 Score = 19.8 bits (39), Expect = 8.3
 Identities = 9/29 (31%), Positives = 13/29 (44%)
 Frame = +3

Query: 51  KETKPAPPKITPSPCSSMQTLQKANSCTS 137
           K +K   PK+ P P     T+   +  TS
Sbjct: 219 KHSKTKSPKLRPYPNWEWHTVGNCDGLTS 247


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 82,628
Number of Sequences: 438
Number of extensions: 1423
Number of successful extensions: 12
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 50
effective length of database: 124,443
effective search space used:  6844365
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)