Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte18p01
         (346 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL110490-2|CAB54440.1|   91|Caenorhabditis elegans Hypothetical ...   134   1e-32
Z66524-1|CAA91420.2|  500|Caenorhabditis elegans Hypothetical pr...    33   0.073
U41534-3|AAB47595.1| 1119|Caenorhabditis elegans Hypothetical pr...    28   1.6  
Z70307-7|CAA94336.2|  531|Caenorhabditis elegans Hypothetical pr...    26   8.3  
AL032639-10|CAA21634.1|  108|Caenorhabditis elegans Hypothetical...    26   8.3  

>AL110490-2|CAB54440.1|   91|Caenorhabditis elegans Hypothetical
           protein Y48B6A.2 protein.
          Length = 91

 Score =  134 bits (325), Expect = 1e-32
 Identities = 58/90 (64%), Positives = 70/90 (77%)
 Frame = +3

Query: 48  MAKRTKKVGITGKYGTRYGASLRKMVKKMEVTQHAKYTCSFCGKDAMKRSCVGIWSCKRC 227
           MAKRTKKVGI GKYGTRYGASLRKM KK+EV QH++YTCSFCGK+AMKR   GIW+C +C
Sbjct: 1   MAKRTKKVGIVGKYGTRYGASLRKMAKKLEVAQHSRYTCSFCGKEAMKRKATGIWNCAKC 60

Query: 228 KRTVAGGAWVFXXXXXXXXXXXVRRLREVK 317
            + VAGGA+V+           +RRLR++K
Sbjct: 61  HKVVAGGAYVYGTVTAATVRSTIRRLRDLK 90


>Z66524-1|CAA91420.2|  500|Caenorhabditis elegans Hypothetical
           protein T13H5.4 protein.
          Length = 500

 Score = 32.7 bits (71), Expect = 0.073
 Identities = 17/55 (30%), Positives = 27/55 (49%)
 Frame = +2

Query: 11  FSVNFCIGEVYQNGQTYQKGWNYWQIWHTLRCLST*NGQKDGSNPTRKVYLLILW 175
           +S   C  + Y+  + +QK +N W+  H +RCL   N     +N T+    L LW
Sbjct: 405 YSCEICGNQTYKGPKAFQKHFNEWRHSHGMRCLGIPN-TSHFANITKIKDALDLW 458


>U41534-3|AAB47595.1| 1119|Caenorhabditis elegans Hypothetical
           protein C16A3.7 protein.
          Length = 1119

 Score = 28.3 bits (60), Expect = 1.6
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = +3

Query: 144 QHAKYTCSFCGKDAMKRSCVGIWSCKRC 227
           ++ KY C+ C      R   G+WSCK C
Sbjct: 229 ENNKYECAICYTRITTRQ--GVWSCKTC 254


>Z70307-7|CAA94336.2|  531|Caenorhabditis elegans Hypothetical
           protein C39E9.7 protein.
          Length = 531

 Score = 25.8 bits (54), Expect = 8.3
 Identities = 9/26 (34%), Positives = 12/26 (46%)
 Frame = +2

Query: 2   FFFFSVNFCIGEVYQNGQTYQKGWNY 79
           FF F    C+  +Y N   YQ   N+
Sbjct: 64  FFIFLCTLCMASIYSNPTVYQSTINF 89


>AL032639-10|CAA21634.1|  108|Caenorhabditis elegans Hypothetical
           protein Y38F1A.9 protein.
          Length = 108

 Score = 25.8 bits (54), Expect = 8.3
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = +3

Query: 90  GTRYGASLRKMVKKMEVTQHAK 155
           G RY + ++KMV K  VT H K
Sbjct: 46  GDRYVSKIKKMVGKFTVTLHIK 67


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,919,121
Number of Sequences: 27780
Number of extensions: 163578
Number of successful extensions: 489
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 475
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 489
length of database: 12,740,198
effective HSP length: 72
effective length of database: 10,740,038
effective search space used: 451081596
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)