Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte18o20
(606 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1al... 82 5e-18
X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alp... 81 1e-17
AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor 1-a... 72 4e-15
EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor 1-a... 58 7e-11
AF069739-1|AAC63272.2| 690|Apis mellifera translation initiatio... 46 3e-07
AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9 methylt... 37 2e-04
DQ863218-1|ABI94394.1| 399|Apis mellifera tyramine receptor pro... 22 4.1
DQ863217-1|ABI94393.1| 399|Apis mellifera tyramine receptor pro... 22 4.1
AJ245824-1|CAB76374.1| 399|Apis mellifera G-protein coupled rec... 22 4.1
DQ244075-1|ABB36785.1| 548|Apis mellifera cytochrome P450 monoo... 22 5.4
DQ201783-1|ABB05503.1| 381|Apis mellifera capa receptor-like GP... 22 5.4
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 21 9.4
AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein. 21 9.4
>AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1alpha
F2 protein.
Length = 461
Score = 81.8 bits (193), Expect = 5e-18
Identities = 56/140 (40%), Positives = 76/140 (54%), Gaps = 22/140 (15%)
Frame = +1
Query: 253 RTKPHCNVGTIGHVDHGKTTLTAAITKVLSDLNL---------AQKKG-----YADI-DN 387
+ K H N+ IGHVD GK+T T + ++ AQ+ G YA + D
Sbjct: 3 KEKIHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 62
Query: 388 APEEKARGITINVAHVEYQTEQRHYGHTDCPGHADYIKNMITGTAQMDGAILVVAATDGV 567
E+ RGITI++A +++T + + D PGH D+IKNMITGT+Q D A+L+VAA G
Sbjct: 63 LKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGE 122
Query: 568 MP-------QTREHLLLAQT 606
QTREH LLA T
Sbjct: 123 FEAGISKNGQTREHALLAFT 142
>X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alpha
protein.
Length = 461
Score = 80.6 bits (190), Expect = 1e-17
Identities = 56/140 (40%), Positives = 76/140 (54%), Gaps = 22/140 (15%)
Frame = +1
Query: 253 RTKPHCNVGTIGHVDHGKTTLTAAITKVLSDLNL---------AQKKG-----YADI-DN 387
+ K H N+ IGHVD GK+T T + ++ AQ+ G YA + D
Sbjct: 3 KEKIHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 62
Query: 388 APEEKARGITINVAHVEYQTEQRHYGHTDCPGHADYIKNMITGTAQMDGAILVVAATDGV 567
E+ RGITI++A +++T + + D PGH D+IKNMITGT+Q D A+L+VAA G
Sbjct: 63 LKAERERGITIDIALWKFETAKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGIGE 122
Query: 568 MP-------QTREHLLLAQT 606
QTREH LLA T
Sbjct: 123 FEAGISKNGQTREHALLAFT 142
>AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor
1-alpha protein.
Length = 274
Score = 72.1 bits (169), Expect = 4e-15
Identities = 39/83 (46%), Positives = 52/83 (62%), Gaps = 7/83 (8%)
Frame = +1
Query: 379 IDNAPEEKARGITINVAHVEYQTEQRHYGHTDCPGHADYIKNMITGTAQMDGAILVVAAT 558
+D E+ RGITI++A +++T + + D PGH D+IKNMITGT+Q D A+L+VAA
Sbjct: 3 LDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAG 62
Query: 559 DGVMP-------QTREHLLLAQT 606
G QTREH LLA T
Sbjct: 63 TGEFEAGISKNGQTREHALLAFT 85
>EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor
1-alpha protein.
Length = 172
Score = 58.0 bits (134), Expect = 7e-11
Identities = 32/69 (46%), Positives = 43/69 (62%), Gaps = 7/69 (10%)
Frame = +1
Query: 421 NVAHVEYQTEQRHYGHTDCPGHADYIKNMITGTAQMDGAILVVAATDGVMP-------QT 579
++A +++T + + D PGH D+IKNMITGT+Q D A+L+VAA G QT
Sbjct: 1 DIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQT 60
Query: 580 REHLLLAQT 606
REH LLA T
Sbjct: 61 REHALLAFT 69
>AF069739-1|AAC63272.2| 690|Apis mellifera translation initiation
factor 2 protein.
Length = 690
Score = 46.0 bits (104), Expect = 3e-07
Identities = 40/115 (34%), Positives = 54/115 (46%)
Frame = +1
Query: 259 KPHCNVGTIGHVDHGKTTLTAAITKVLSDLNLAQKKGYADIDNAPEEKARGITINVAHVE 438
K H V +GHVDHGKTTL A L + ++A K + I I V
Sbjct: 143 KRHPIVTIMGHVDHGKTTLLDA----LRNTSIA-KSEFGGITQC---------IGAFDVT 188
Query: 439 YQTEQRHYGHTDCPGHADYIKNMITGTAQMDGAILVVAATDGVMPQTREHLLLAQ 603
++ +R D PGHA +I G D +LVVAA DGV QT + + +A+
Sbjct: 189 LESGER-VTFLDTPGHAAFISMRHRGAHITDIVVLVVAADDGVKEQTLQSIEMAK 242
>AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9
methyltransferase protein.
Length = 683
Score = 36.7 bits (81), Expect = 2e-04
Identities = 19/49 (38%), Positives = 28/49 (57%), Gaps = 2/49 (4%)
Frame = +1
Query: 271 NVGTIGHVDHGKTTLTAAITKV--LSDLNLAQKKGYADIDNAPEEKARG 411
N+GTIGHV HGK+T+ AI+ V + N ++ +D E+ RG
Sbjct: 44 NIGTIGHVAHGKSTIVKAISGVQTVRFKNELERNITIKLDTRAEDSTRG 92
>DQ863218-1|ABI94394.1| 399|Apis mellifera tyramine receptor
protein.
Length = 399
Score = 22.2 bits (45), Expect = 4.1
Identities = 7/33 (21%), Positives = 18/33 (54%)
Frame = -1
Query: 522 CCAXNHVLNVVSMTWAVSVSIMPLFCLVFNMSH 424
CC + ++ ++ V+ ++ PL +FN+ +
Sbjct: 356 CCPSDRMVYFITWLGYVNSALNPLIYTIFNLDY 388
>DQ863217-1|ABI94393.1| 399|Apis mellifera tyramine receptor
protein.
Length = 399
Score = 22.2 bits (45), Expect = 4.1
Identities = 7/33 (21%), Positives = 18/33 (54%)
Frame = -1
Query: 522 CCAXNHVLNVVSMTWAVSVSIMPLFCLVFNMSH 424
CC + ++ ++ V+ ++ PL +FN+ +
Sbjct: 356 CCPSDRMVYFITWLGYVNSALNPLIYTIFNLDY 388
>AJ245824-1|CAB76374.1| 399|Apis mellifera G-protein coupled
receptor protein.
Length = 399
Score = 22.2 bits (45), Expect = 4.1
Identities = 7/33 (21%), Positives = 18/33 (54%)
Frame = -1
Query: 522 CCAXNHVLNVVSMTWAVSVSIMPLFCLVFNMSH 424
CC + ++ ++ V+ ++ PL +FN+ +
Sbjct: 356 CCPSDRMVYFITWLGYVNSALNPLIYTIFNLDY 388
>DQ244075-1|ABB36785.1| 548|Apis mellifera cytochrome P450
monooxygenase protein.
Length = 548
Score = 21.8 bits (44), Expect = 5.4
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = -2
Query: 215 IILKGVNPDKTVEFRTFAHWL 153
I+ V DK+ E+R F WL
Sbjct: 102 ILSSNVYIDKSTEYRFFKPWL 122
>DQ201783-1|ABB05503.1| 381|Apis mellifera capa receptor-like GPCR
protein.
Length = 381
Score = 21.8 bits (44), Expect = 5.4
Identities = 8/18 (44%), Positives = 9/18 (50%)
Frame = +3
Query: 501 EHDYXHSTNGWCHISSSC 554
E DY N W +I S C
Sbjct: 298 ESDYYPDLNEWLYILSGC 315
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 21.0 bits (42), Expect = 9.4
Identities = 6/14 (42%), Positives = 11/14 (78%)
Frame = -2
Query: 200 VNPDKTVEFRTFAH 159
++P K ++F+TF H
Sbjct: 1737 MDPSKAMQFQTFPH 1750
>AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein.
Length = 652
Score = 21.0 bits (42), Expect = 9.4
Identities = 7/12 (58%), Positives = 7/12 (58%)
Frame = +1
Query: 457 HYGHTDCPGHAD 492
HYGH PG D
Sbjct: 280 HYGHHPDPGEVD 291
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 171,662
Number of Sequences: 438
Number of extensions: 3447
Number of successful extensions: 22
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17848938
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -