Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte18o04
         (642 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB006685-1|BAA23993.1|  254|Homo sapiens AIRE-3 protein.               31   2.6  
AB006684-3|BAA23992.1|  254|Homo sapiens AIRE-3 protein.               31   2.6  
AB006684-2|BAA23991.1|  348|Homo sapiens AIRE-2 protein.               31   2.6  
AB006683-1|BAA23989.1|  348|Homo sapiens AIRE-2 protein.               31   2.6  
X68010-1|CAA48147.1|  151|Homo sapiens ZNF75 protein.                  31   4.6  
S67970-1|AAB29696.1|  289|Homo sapiens ZNF75 protein.                  31   4.6  
S43109-1|AAB22971.1|  219|Homo sapiens ZNF75 protein.                  31   4.6  
BC109100-1|AAI09101.1|  510|Homo sapiens zinc finger protein 75 ...    31   4.6  
AL831984-1|CAD89900.1|  510|Homo sapiens hypothetical protein pr...    31   4.6  

>AB006685-1|BAA23993.1|  254|Homo sapiens AIRE-3 protein.
          Length = 254

 Score = 31.5 bits (68), Expect = 2.6
 Identities = 13/46 (28%), Positives = 21/46 (45%), Gaps = 1/46 (2%)
 Frame = +3

Query: 210 CICQKTQSKCTHCQKRSRRSYAETCHRSTRV-CNEPLLKSISKTRW 344
           C+CQK + +C  C+        + C R+  + C  P L+ I    W
Sbjct: 93  CLCQKNEDECAVCRDGGELICCDGCPRAFHLACLSPPLREIPSGTW 138


>AB006684-3|BAA23992.1|  254|Homo sapiens AIRE-3 protein.
          Length = 254

 Score = 31.5 bits (68), Expect = 2.6
 Identities = 13/46 (28%), Positives = 21/46 (45%), Gaps = 1/46 (2%)
 Frame = +3

Query: 210 CICQKTQSKCTHCQKRSRRSYAETCHRSTRV-CNEPLLKSISKTRW 344
           C+CQK + +C  C+        + C R+  + C  P L+ I    W
Sbjct: 93  CLCQKNEDECAVCRDGGELICCDGCPRAFHLACLSPPLREIPSGTW 138


>AB006684-2|BAA23991.1|  348|Homo sapiens AIRE-2 protein.
          Length = 348

 Score = 31.5 bits (68), Expect = 2.6
 Identities = 13/46 (28%), Positives = 21/46 (45%), Gaps = 1/46 (2%)
 Frame = +3

Query: 210 CICQKTQSKCTHCQKRSRRSYAETCHRSTRV-CNEPLLKSISKTRW 344
           C+CQK + +C  C+        + C R+  + C  P L+ I    W
Sbjct: 93  CLCQKNEDECAVCRDGGELICCDGCPRAFHLACLSPPLREIPSGTW 138


>AB006683-1|BAA23989.1|  348|Homo sapiens AIRE-2 protein.
          Length = 348

 Score = 31.5 bits (68), Expect = 2.6
 Identities = 13/46 (28%), Positives = 21/46 (45%), Gaps = 1/46 (2%)
 Frame = +3

Query: 210 CICQKTQSKCTHCQKRSRRSYAETCHRSTRV-CNEPLLKSISKTRW 344
           C+CQK + +C  C+        + C R+  + C  P L+ I    W
Sbjct: 93  CLCQKNEDECAVCRDGGELICCDGCPRAFHLACLSPPLREIPSGTW 138


>X68010-1|CAA48147.1|  151|Homo sapiens ZNF75 protein.
          Length = 151

 Score = 30.7 bits (66), Expect = 4.6
 Identities = 16/48 (33%), Positives = 23/48 (47%)
 Frame = +3

Query: 234 KCTHCQKRSRRSYAETCHRSTRVCNEPLLKSISKTRWSRIESKRKHQK 377
           KC  C KR  ++     H+ T    +P   S+ K  +SR  S  +HQK
Sbjct: 91  KCDECGKRFIQNSHLIKHQRTHTGEQPYTCSLCKRNFSRRSSLLRHQK 138


>S67970-1|AAB29696.1|  289|Homo sapiens ZNF75 protein.
          Length = 289

 Score = 30.7 bits (66), Expect = 4.6
 Identities = 16/48 (33%), Positives = 23/48 (47%)
 Frame = +3

Query: 234 KCTHCQKRSRRSYAETCHRSTRVCNEPLLKSISKTRWSRIESKRKHQK 377
           KC  C KR  ++     H+ T    +P   S+ K  +SR  S  +HQK
Sbjct: 229 KCDECGKRFIQNSHLIKHQRTHTGEQPYTCSLCKRNFSRRSSLLRHQK 276


>S43109-1|AAB22971.1|  219|Homo sapiens ZNF75 protein.
          Length = 219

 Score = 30.7 bits (66), Expect = 4.6
 Identities = 16/48 (33%), Positives = 23/48 (47%)
 Frame = +3

Query: 234 KCTHCQKRSRRSYAETCHRSTRVCNEPLLKSISKTRWSRIESKRKHQK 377
           KC  C KR  ++     H+ T    +P   S+ K  +SR  S  +HQK
Sbjct: 159 KCDECGKRFIQNSHLIKHQRTHTGEQPYTCSLCKRNFSRRSSLLRHQK 206


>BC109100-1|AAI09101.1|  510|Homo sapiens zinc finger protein 75
           (D8C6) protein.
          Length = 510

 Score = 30.7 bits (66), Expect = 4.6
 Identities = 16/48 (33%), Positives = 23/48 (47%)
 Frame = +3

Query: 234 KCTHCQKRSRRSYAETCHRSTRVCNEPLLKSISKTRWSRIESKRKHQK 377
           KC  C KR  ++     H+ T    +P   S+ K  +SR  S  +HQK
Sbjct: 450 KCDECGKRFIQNSHLIKHQRTHTGEQPYTCSLCKRNFSRRSSLLRHQK 497


>AL831984-1|CAD89900.1|  510|Homo sapiens hypothetical protein
           protein.
          Length = 510

 Score = 30.7 bits (66), Expect = 4.6
 Identities = 16/48 (33%), Positives = 23/48 (47%)
 Frame = +3

Query: 234 KCTHCQKRSRRSYAETCHRSTRVCNEPLLKSISKTRWSRIESKRKHQK 377
           KC  C KR  ++     H+ T    +P   S+ K  +SR  S  +HQK
Sbjct: 450 KCDECGKRFIQNSHLIKHQRTHTGEQPYTCSLCKRNFSRRSSLLRHQK 497


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 79,844,687
Number of Sequences: 237096
Number of extensions: 1469349
Number of successful extensions: 4310
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 3873
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4298
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7085195460
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)