Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte18o04
         (642 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY075397-1|AAL68229.1|  827|Drosophila melanogaster LD28101p pro...    33   0.25 
AE014296-83|AAN11439.1|  827|Drosophila melanogaster CG32344-PA ...    33   0.25 
AF210453-1|AAF21041.1| 4559|Drosophila melanogaster dynein heavy...    33   0.43 
M27999-1|AAA29011.1|  101|Drosophila melanogaster bithoraxoid pr...    32   0.76 
AY118756-1|AAM50616.1|  101|Drosophila melanogaster GH08635p pro...    32   0.76 
AE014297-2264|AAF55357.1|  101|Drosophila melanogaster CG31275-P...    32   0.76 
AE014297-2263|AAN13721.1|  101|Drosophila melanogaster CG31275-P...    32   0.76 
AY071583-1|AAL49205.1|  495|Drosophila melanogaster RE63964p pro...    31   1.3  
AE014298-2106|AAF48426.1|  495|Drosophila melanogaster CG9081-PA...    31   1.3  
BT022143-1|AAY51538.1|  474|Drosophila melanogaster IP01468p pro...    29   4.1  
AE014297-1521|AAF54813.1|  501|Drosophila melanogaster CG5245-PA...    29   4.1  

>AY075397-1|AAL68229.1|  827|Drosophila melanogaster LD28101p
           protein.
          Length = 827

 Score = 33.5 bits (73), Expect = 0.25
 Identities = 16/43 (37%), Positives = 27/43 (62%)
 Frame = +2

Query: 134 MPKEFKEQVIKTVTRIEESHNVVGVLYLSKDAVQMYTLPETVA 262
           +P++  E+   TVT I++SH++ GVL  S++A + Y     VA
Sbjct: 415 IPQDLLEEEHLTVTDIKKSHHIAGVLRTSENAYKKYLSSRPVA 457


>AE014296-83|AAN11439.1|  827|Drosophila melanogaster CG32344-PA
           protein.
          Length = 827

 Score = 33.5 bits (73), Expect = 0.25
 Identities = 16/43 (37%), Positives = 27/43 (62%)
 Frame = +2

Query: 134 MPKEFKEQVIKTVTRIEESHNVVGVLYLSKDAVQMYTLPETVA 262
           +P++  E+   TVT I++SH++ GVL  S++A + Y     VA
Sbjct: 415 IPQDLLEEEHLTVTDIKKSHHIAGVLRTSENAYKKYLSSRPVA 457


>AF210453-1|AAF21041.1| 4559|Drosophila melanogaster dynein heavy
            chain protein.
          Length = 4559

 Score = 32.7 bits (71), Expect = 0.43
 Identities = 31/132 (23%), Positives = 63/132 (47%), Gaps = 1/132 (0%)
 Frame = +2

Query: 62   FYEIFQHFLLSMSIQYKKKINKCKMPKEFKEQVIKTVTRIEESHNVVGVLYLSKDAVQMY 241
            F+E  Q  L S+S+++  +I    +PKE    V   +  + ++ N +  LYL+      Y
Sbjct: 3053 FHEWPQQALESVSLRFLSEITV--LPKELALPVSNFMAFVHKTVNDISKLYLANAKRYNY 3110

Query: 242  TLPETVAQVLCRNLPPLNASMQRAV-TEIDIEDTLVAYRIETKTSEVLVASDLDFTACVV 418
            T P++  +++      L+  ++  +   + +E+ L+  ++ + T EV    D+     V 
Sbjct: 3111 TTPKSFLELIALYSKLLHEKVKANLDRRLRLENGLI--KLASCTKEVDALQDVLKVQEVE 3168

Query: 419  HRIKRKHKKNLI 454
             +IK +   NLI
Sbjct: 3169 LKIKNQEADNLI 3180


>M27999-1|AAA29011.1|  101|Drosophila melanogaster bithoraxoid
           protein.
          Length = 101

 Score = 31.9 bits (69), Expect = 0.76
 Identities = 28/85 (32%), Positives = 41/85 (48%), Gaps = 2/85 (2%)
 Frame = +2

Query: 170 VTRIEESHNVVGVLY-LSKDAVQMYTLPETVAQVLCRNLPPLNASM-QRAVTEIDIEDTL 343
           V RI   H +  V+   + +AV   +   T AQ + ++L  L  S  Q  V +ID  + L
Sbjct: 16  VDRILSEHTIGYVVSDNTANAVAETSFDNTSAQAILKHLHGLLVSTCQSVVRDIDPSNKL 75

Query: 344 VAYRIETKTSEVLVASDLDFTACVV 418
              R+ T+  E LVA +  FT  VV
Sbjct: 76  CFMRLGTRKFEYLVAPEEYFTITVV 100


>AY118756-1|AAM50616.1|  101|Drosophila melanogaster GH08635p
           protein.
          Length = 101

 Score = 31.9 bits (69), Expect = 0.76
 Identities = 28/85 (32%), Positives = 41/85 (48%), Gaps = 2/85 (2%)
 Frame = +2

Query: 170 VTRIEESHNVVGVLY-LSKDAVQMYTLPETVAQVLCRNLPPLNASM-QRAVTEIDIEDTL 343
           V RI   H +  V+   + +AV   +   T AQ + ++L  L  S  Q  V +ID  + L
Sbjct: 16  VDRILSEHTIGYVVSDNTANAVAETSFDNTSAQAILKHLHGLLVSTCQSVVRDIDPSNKL 75

Query: 344 VAYRIETKTSEVLVASDLDFTACVV 418
              R+ T+  E LVA +  FT  VV
Sbjct: 76  CFMRLGTRKFEYLVAPEEYFTITVV 100


>AE014297-2264|AAF55357.1|  101|Drosophila melanogaster CG31275-PB,
           isoform B protein.
          Length = 101

 Score = 31.9 bits (69), Expect = 0.76
 Identities = 28/85 (32%), Positives = 41/85 (48%), Gaps = 2/85 (2%)
 Frame = +2

Query: 170 VTRIEESHNVVGVLY-LSKDAVQMYTLPETVAQVLCRNLPPLNASM-QRAVTEIDIEDTL 343
           V RI   H +  V+   + +AV   +   T AQ + ++L  L  S  Q  V +ID  + L
Sbjct: 16  VDRILSEHTIGYVVSDNTANAVAETSFDNTSAQAILKHLHGLLVSTCQSVVRDIDPSNKL 75

Query: 344 VAYRIETKTSEVLVASDLDFTACVV 418
              R+ T+  E LVA +  FT  VV
Sbjct: 76  CFMRLGTRKFEYLVAPEEYFTITVV 100


>AE014297-2263|AAN13721.1|  101|Drosophila melanogaster CG31275-PA,
           isoform A protein.
          Length = 101

 Score = 31.9 bits (69), Expect = 0.76
 Identities = 28/85 (32%), Positives = 41/85 (48%), Gaps = 2/85 (2%)
 Frame = +2

Query: 170 VTRIEESHNVVGVLY-LSKDAVQMYTLPETVAQVLCRNLPPLNASM-QRAVTEIDIEDTL 343
           V RI   H +  V+   + +AV   +   T AQ + ++L  L  S  Q  V +ID  + L
Sbjct: 16  VDRILSEHTIGYVVSDNTANAVAETSFDNTSAQAILKHLHGLLVSTCQSVVRDIDPSNKL 75

Query: 344 VAYRIETKTSEVLVASDLDFTACVV 418
              R+ T+  E LVA +  FT  VV
Sbjct: 76  CFMRLGTRKFEYLVAPEEYFTITVV 100


>AY071583-1|AAL49205.1|  495|Drosophila melanogaster RE63964p
           protein.
          Length = 495

 Score = 31.1 bits (67), Expect = 1.3
 Identities = 13/44 (29%), Positives = 24/44 (54%)
 Frame = +2

Query: 149 KEQVIKTVTRIEESHNVVGVLYLSKDAVQMYTLPETVAQVLCRN 280
           K +++  +  + E H  V  ++  KD + M+T PE + Q+L  N
Sbjct: 49  KGEILNWLKELREKHGPVFRIWFGKDLMVMFTDPEDIKQLLGNN 92


>AE014298-2106|AAF48426.1|  495|Drosophila melanogaster CG9081-PA
           protein.
          Length = 495

 Score = 31.1 bits (67), Expect = 1.3
 Identities = 13/44 (29%), Positives = 24/44 (54%)
 Frame = +2

Query: 149 KEQVIKTVTRIEESHNVVGVLYLSKDAVQMYTLPETVAQVLCRN 280
           K +++  +  + E H  V  ++  KD + M+T PE + Q+L  N
Sbjct: 49  KGEILNWLKELREKHGPVFRIWFGKDLMVMFTDPEDIKQLLGNN 92


>BT022143-1|AAY51538.1|  474|Drosophila melanogaster IP01468p
           protein.
          Length = 474

 Score = 29.5 bits (63), Expect = 4.1
 Identities = 15/46 (32%), Positives = 21/46 (45%)
 Frame = +3

Query: 234 KCTHCQKRSRRSYAETCHRSTRVCNEPLLKSISKTRWSRIESKRKH 371
           KC+HC K   RS     H  T    +P   S   TR+++  S  +H
Sbjct: 418 KCSHCSKLFARSAEHQEHLRTHTGEKPYKCSHCSTRYTQKSSLGRH 463


>AE014297-1521|AAF54813.1|  501|Drosophila melanogaster CG5245-PA
           protein.
          Length = 501

 Score = 29.5 bits (63), Expect = 4.1
 Identities = 15/46 (32%), Positives = 21/46 (45%)
 Frame = +3

Query: 234 KCTHCQKRSRRSYAETCHRSTRVCNEPLLKSISKTRWSRIESKRKH 371
           KC+HC K   RS     H  T    +P   S   TR+++  S  +H
Sbjct: 445 KCSHCSKLFARSAEHQEHLRTHTGEKPYKCSHCSTRYTQKSSLGRH 490


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,979,503
Number of Sequences: 53049
Number of extensions: 511226
Number of successful extensions: 1472
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1391
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1469
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2703623850
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)