Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte18n12
(584 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF625897-1|ABR45904.1| 684|Apis mellifera hexamerin protein. 24 1.3
EF591128-1|ABQ59246.1| 684|Apis mellifera hexamerin 70a protein. 24 1.3
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 24 1.3
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 24 1.3
DQ855486-1|ABH88173.1| 104|Apis mellifera chemosensory protein ... 23 1.7
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 23 2.2
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 23 2.9
DQ494417-1|ABF55368.1| 42|Apis mellifera telomerase reverse tr... 22 3.9
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 22 5.1
AY375535-1|AAQ82648.1| 147|Apis mellifera doublesex protein. 22 5.1
D79208-1|BAA11466.1| 567|Apis mellifera alpha-glucosidase protein. 21 6.7
DQ013068-1|AAY81956.1| 931|Apis mellifera dusty protein kinase ... 21 6.7
DQ013067-1|AAY81955.1| 969|Apis mellifera dusty protein kinase ... 21 6.7
AY568009-1|AAS73299.1| 300|Apis mellifera ADP/ATP translocase p... 21 6.7
AY332626-1|AAQ24500.1| 300|Apis mellifera ADP/ATP translocase p... 21 6.7
AB253417-1|BAE86928.1| 567|Apis mellifera alpha-glucosidase pro... 21 6.7
>EF625897-1|ABR45904.1| 684|Apis mellifera hexamerin protein.
Length = 684
Score = 23.8 bits (49), Expect = 1.3
Identities = 19/52 (36%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
Frame = +3
Query: 273 YVGVCLRFQSNLHSHRRHAR-MSIYKKS*LKI-NNINYSTYIWSINNAVTSK 422
Y LR S L HA+ I+ K+ L NNIN + YI+S+ AV ++
Sbjct: 100 YYPQLLREMSALFKLFYHAKDFDIFFKTALWAKNNINEAQYIYSLYTAVITR 151
>EF591128-1|ABQ59246.1| 684|Apis mellifera hexamerin 70a protein.
Length = 684
Score = 23.8 bits (49), Expect = 1.3
Identities = 19/52 (36%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
Frame = +3
Query: 273 YVGVCLRFQSNLHSHRRHAR-MSIYKKS*LKI-NNINYSTYIWSINNAVTSK 422
Y LR S L HA+ I+ K+ L NNIN + YI+S+ AV ++
Sbjct: 100 YYPQLLREMSALFKLFYHAKDFDIFFKTALWAKNNINEAQYIYSLYTAVITR 151
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 23.8 bits (49), Expect = 1.3
Identities = 9/15 (60%), Positives = 13/15 (86%)
Frame = -2
Query: 82 KIGFSISVVISLHVY 38
K+ SIS++ISLHV+
Sbjct: 275 KVTLSISILISLHVF 289
Score = 21.0 bits (42), Expect = 8.9
Identities = 8/28 (28%), Positives = 18/28 (64%)
Frame = +2
Query: 56 HYRNRKTNLLLPYINIPLHCVLDQLLVI 139
H+R+ +T+ + P++ +L +LLV+
Sbjct: 332 HFRSPQTHKMAPWVKRVFIHILPRLLVM 359
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 23.8 bits (49), Expect = 1.3
Identities = 9/15 (60%), Positives = 13/15 (86%)
Frame = -2
Query: 82 KIGFSISVVISLHVY 38
K+ SIS++ISLHV+
Sbjct: 275 KVTLSISILISLHVF 289
Score = 21.0 bits (42), Expect = 8.9
Identities = 8/28 (28%), Positives = 18/28 (64%)
Frame = +2
Query: 56 HYRNRKTNLLLPYINIPLHCVLDQLLVI 139
H+R+ +T+ + P++ +L +LLV+
Sbjct: 332 HFRSPQTHKMAPWVKRVFIHILPRLLVM 359
>DQ855486-1|ABH88173.1| 104|Apis mellifera chemosensory protein 5
protein.
Length = 104
Score = 23.4 bits (48), Expect = 1.7
Identities = 7/13 (53%), Positives = 10/13 (76%)
Frame = +2
Query: 89 PYINIPLHCVLDQ 127
PY+ LHC+LD+
Sbjct: 31 PYVQKQLHCILDR 43
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 23.0 bits (47), Expect = 2.2
Identities = 8/22 (36%), Positives = 14/22 (63%)
Frame = +3
Query: 39 YTCKEITTEIEKPIFYYLI*TY 104
+TC E+ +++ + YYL TY
Sbjct: 231 FTCLEVVFVLKRRLGYYLFHTY 252
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 22.6 bits (46), Expect = 2.9
Identities = 9/28 (32%), Positives = 19/28 (67%)
Frame = +2
Query: 56 HYRNRKTNLLLPYINIPLHCVLDQLLVI 139
H+R+ +T+++ P++ VL +LLV+
Sbjct: 328 HFRSPQTHVMAPWVRRVFIHVLPRLLVM 355
>DQ494417-1|ABF55368.1| 42|Apis mellifera telomerase reverse
transcriptase protein.
Length = 42
Score = 22.2 bits (45), Expect = 3.9
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = +2
Query: 365 KQYKL*HLYLVHKQRCNEQAIS 430
+QY L H L+ K +CN +S
Sbjct: 19 QQYCLHHKILIKKNKCNAFIVS 40
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 21.8 bits (44), Expect = 5.1
Identities = 9/37 (24%), Positives = 21/37 (56%)
Frame = +3
Query: 357 LKINNINYSTYIWSINNAVTSKQSLHVSQAERNSDAK 467
+K+N+++ + + N T + +H+S +E D+K
Sbjct: 187 IKLNSLDTEQILDDMYNNNTEWEIVHMSHSESTIDSK 223
>AY375535-1|AAQ82648.1| 147|Apis mellifera doublesex protein.
Length = 147
Score = 21.8 bits (44), Expect = 5.1
Identities = 9/26 (34%), Positives = 17/26 (65%)
Frame = -1
Query: 239 PILPQTAIVS*IQDSANTQN*SILLD 162
P+ P TA+V+ + + ++N ILL+
Sbjct: 103 PLHPHTAMVTHLPQTLTSENVEILLE 128
>D79208-1|BAA11466.1| 567|Apis mellifera alpha-glucosidase protein.
Length = 567
Score = 21.4 bits (43), Expect = 6.7
Identities = 8/24 (33%), Positives = 12/24 (50%)
Frame = +1
Query: 208 HDTIAVCGRMGEEKRTFLDLCDML 279
HD + + R GEEK + +L
Sbjct: 347 HDQLRLVSRFGEEKARMITTMSLL 370
>DQ013068-1|AAY81956.1| 931|Apis mellifera dusty protein kinase
isoform B protein.
Length = 931
Score = 21.4 bits (43), Expect = 6.7
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = +1
Query: 511 YHYGNALSLTRDLEREMV 564
Y N +SLT DLE E+V
Sbjct: 66 YGQTNHISLTLDLEYELV 83
>DQ013067-1|AAY81955.1| 969|Apis mellifera dusty protein kinase
isoform A protein.
Length = 969
Score = 21.4 bits (43), Expect = 6.7
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = +1
Query: 511 YHYGNALSLTRDLEREMV 564
Y N +SLT DLE E+V
Sbjct: 104 YGQTNHISLTLDLEYELV 121
>AY568009-1|AAS73299.1| 300|Apis mellifera ADP/ATP translocase
protein.
Length = 300
Score = 21.4 bits (43), Expect = 6.7
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +1
Query: 34 FDTRVRKSLPKSKNQSSITLYKHTITLCFGSI 129
FDT R+ + +S S LYK T+ C+ +I
Sbjct: 233 FDTVRRRMMMQSGRAKSEILYKSTLH-CWATI 263
>AY332626-1|AAQ24500.1| 300|Apis mellifera ADP/ATP translocase
protein.
Length = 300
Score = 21.4 bits (43), Expect = 6.7
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +1
Query: 34 FDTRVRKSLPKSKNQSSITLYKHTITLCFGSI 129
FDT R+ + +S S LYK T+ C+ +I
Sbjct: 233 FDTVRRRMMMQSGRAKSEILYKSTLH-CWATI 263
>AB253417-1|BAE86928.1| 567|Apis mellifera alpha-glucosidase
protein.
Length = 567
Score = 21.4 bits (43), Expect = 6.7
Identities = 8/24 (33%), Positives = 12/24 (50%)
Frame = +1
Query: 208 HDTIAVCGRMGEEKRTFLDLCDML 279
HD + + R GEEK + +L
Sbjct: 347 HDQLRLVSRFGEEKARMITTMSLL 370
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 168,810
Number of Sequences: 438
Number of extensions: 3627
Number of successful extensions: 18
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 16993167
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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