Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte18n10
         (302 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC132736-1|AAI32737.1| 1843|Homo sapiens coiled-coil domain cont...    27   8.1  
AK001254-1|BAA91584.1|  636|Homo sapiens protein ( Homo sapiens ...    27   8.1  
AB201172-1|BAE44387.1| 1870|Homo sapiens girdin protein.               27   8.1  
AB125644-1|BAF44475.1| 1843|Homo sapiens PKB/Akt-binding protein...    27   8.1  
AB033038-1|BAA86526.2|  802|Homo sapiens KIAA1212 protein protein.     27   8.1  

>BC132736-1|AAI32737.1| 1843|Homo sapiens coiled-coil domain
            containing 88A protein.
          Length = 1843

 Score = 27.5 bits (58), Expect = 8.1
 Identities = 12/26 (46%), Positives = 17/26 (65%)
 Frame = -3

Query: 87   KDQRDLTEKLNHKISQTIRSCNHKVK 10
            K Q   +  L HKIS+T+ S +HK+K
Sbjct: 1619 KRQTRSSPVLQHKISETLESRHHKIK 1644


>AK001254-1|BAA91584.1|  636|Homo sapiens protein ( Homo sapiens
           cDNA FLJ10392 fis, clone NT2RM4000169, weakly similar to
           INTRACELLULAR PROTEIN TRANSPORT PROTEIN USO1. ).
          Length = 636

 Score = 27.5 bits (58), Expect = 8.1
 Identities = 12/26 (46%), Positives = 17/26 (65%)
 Frame = -3

Query: 87  KDQRDLTEKLNHKISQTIRSCNHKVK 10
           K Q   +  L HKIS+T+ S +HK+K
Sbjct: 498 KRQTRSSPVLQHKISETLESRHHKIK 523


>AB201172-1|BAE44387.1| 1870|Homo sapiens girdin protein.
          Length = 1870

 Score = 27.5 bits (58), Expect = 8.1
 Identities = 12/26 (46%), Positives = 17/26 (65%)
 Frame = -3

Query: 87   KDQRDLTEKLNHKISQTIRSCNHKVK 10
            K Q   +  L HKIS+T+ S +HK+K
Sbjct: 1646 KRQTRSSPVLQHKISETLESRHHKIK 1671


>AB125644-1|BAF44475.1| 1843|Homo sapiens PKB/Akt-binding protein
            protein.
          Length = 1843

 Score = 27.5 bits (58), Expect = 8.1
 Identities = 12/26 (46%), Positives = 17/26 (65%)
 Frame = -3

Query: 87   KDQRDLTEKLNHKISQTIRSCNHKVK 10
            K Q   +  L HKIS+T+ S +HK+K
Sbjct: 1619 KRQTRSSPVLQHKISETLESRHHKIK 1644


>AB033038-1|BAA86526.2|  802|Homo sapiens KIAA1212 protein protein.
          Length = 802

 Score = 27.5 bits (58), Expect = 8.1
 Identities = 12/26 (46%), Positives = 17/26 (65%)
 Frame = -3

Query: 87  KDQRDLTEKLNHKISQTIRSCNHKVK 10
           K Q   +  L HKIS+T+ S +HK+K
Sbjct: 578 KRQTRSSPVLQHKISETLESRHHKIK 603


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 35,921,679
Number of Sequences: 237096
Number of extensions: 576729
Number of successful extensions: 781
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 772
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 781
length of database: 76,859,062
effective HSP length: 77
effective length of database: 58,602,670
effective search space used: 1347861410
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)