Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte18n08
(582 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex det... 27 0.18
DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex det... 23 2.2
DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex det... 23 2.2
AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex det... 23 2.9
DQ342041-1|ABC69933.1| 828|Apis mellifera STIP protein. 22 3.8
AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9 methylt... 22 3.8
X16709-1|CAA34681.1| 162|Apis mellifera phospholipase A-2 protein. 22 5.1
EF373554-1|ABQ28728.1| 167|Apis mellifera phospholipase A2 prot... 22 5.1
AF438408-1|AAL30844.1| 167|Apis mellifera phospholipase A2 prot... 22 5.1
L01588-1|AAA27735.1| 74|Apis mellifera zinc finger protein pro... 21 6.7
DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex det... 21 8.9
DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex det... 21 8.9
AB253416-1|BAE86927.1| 580|Apis mellifera alpha-glucosidase pro... 21 8.9
>AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex
determiner protein.
Length = 428
Score = 26.6 bits (56), Expect = 0.18
Identities = 15/42 (35%), Positives = 20/42 (47%)
Frame = -2
Query: 137 LSNPFLQNNQPFLKYGMWNENYL*NESNVMIKQNLQ*IYMNL 12
LSN + NN + KY N NY N N N + +Y N+
Sbjct: 318 LSNKTIHNNNNY-KYNYNNNNYNNNNYNNNYNNNCKKLYYNI 358
>DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 23.0 bits (47), Expect = 2.2
Identities = 12/36 (33%), Positives = 16/36 (44%)
Frame = -2
Query: 122 LQNNQPFLKYGMWNENYL*NESNVMIKQNLQ*IYMN 15
L NN + Y +N NY N N N + +Y N
Sbjct: 85 LSNNYKYSNYNNYNNNYN-NNYNNNYNNNYKKLYKN 119
>DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 23.0 bits (47), Expect = 2.2
Identities = 12/36 (33%), Positives = 16/36 (44%)
Frame = -2
Query: 122 LQNNQPFLKYGMWNENYL*NESNVMIKQNLQ*IYMN 15
L NN + Y +N NY N N N + +Y N
Sbjct: 85 LSNNYKYSNYNNYNNNYN-NNYNNNYNNNYKKLYKN 119
>AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex
determiner protein.
Length = 425
Score = 22.6 bits (46), Expect = 2.9
Identities = 12/39 (30%), Positives = 18/39 (46%), Gaps = 1/39 (2%)
Frame = -2
Query: 122 LQNNQPFLKYGMWNENY-L*NESNVMIKQNLQ*IYMNLH 9
L NN + Y +N NY N N N + +Y N++
Sbjct: 318 LSNNYKYSNYNNYNNNYNNYNNYNNNYNNNYKKLYYNIN 356
>DQ342041-1|ABC69933.1| 828|Apis mellifera STIP protein.
Length = 828
Score = 22.2 bits (45), Expect = 3.8
Identities = 6/16 (37%), Positives = 11/16 (68%)
Frame = +3
Query: 93 ILEKWLVILKKWVGEN 140
++E W+ +L W+ EN
Sbjct: 498 LIEHWMPLLPNWILEN 513
>AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9
methyltransferase protein.
Length = 683
Score = 22.2 bits (45), Expect = 3.8
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +2
Query: 2 SSSVSSCKFTVNFA*SLHYSHFINN 76
+ S C +TV+ A + SHFIN+
Sbjct: 556 NESEEQCPYTVDAAIYGNISHFINH 580
>X16709-1|CAA34681.1| 162|Apis mellifera phospholipase A-2 protein.
Length = 162
Score = 21.8 bits (44), Expect = 5.1
Identities = 7/16 (43%), Positives = 12/16 (75%)
Frame = +1
Query: 355 DAL*SYFPSKVYFDMV 402
D + SYF K+YF+++
Sbjct: 104 DTISSYFVGKMYFNLI 119
>EF373554-1|ABQ28728.1| 167|Apis mellifera phospholipase A2
protein.
Length = 167
Score = 21.8 bits (44), Expect = 5.1
Identities = 7/16 (43%), Positives = 12/16 (75%)
Frame = +1
Query: 355 DAL*SYFPSKVYFDMV 402
D + SYF K+YF+++
Sbjct: 109 DTISSYFVGKMYFNLI 124
>AF438408-1|AAL30844.1| 167|Apis mellifera phospholipase A2
protein.
Length = 167
Score = 21.8 bits (44), Expect = 5.1
Identities = 7/16 (43%), Positives = 12/16 (75%)
Frame = +1
Query: 355 DAL*SYFPSKVYFDMV 402
D + SYF K+YF+++
Sbjct: 109 DTISSYFVGKMYFNLI 124
>L01588-1|AAA27735.1| 74|Apis mellifera zinc finger protein
protein.
Length = 74
Score = 21.4 bits (43), Expect = 6.7
Identities = 8/15 (53%), Positives = 9/15 (60%)
Frame = +2
Query: 140 LGDGEQPNHLLHCAR 184
L GE+P H HC R
Sbjct: 31 LHTGEKPYHCSHCDR 45
>DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.0 bits (42), Expect = 8.9
Identities = 8/20 (40%), Positives = 13/20 (65%)
Frame = +1
Query: 286 NRKSKERLPNMFEELRSWRK 345
N +S+ER N ++ R +RK
Sbjct: 38 NSRSREREQNSYKNEREYRK 57
>DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.0 bits (42), Expect = 8.9
Identities = 8/20 (40%), Positives = 13/20 (65%)
Frame = +1
Query: 286 NRKSKERLPNMFEELRSWRK 345
N +S+ER N ++ R +RK
Sbjct: 38 NSRSREREQNSYKNEREYRK 57
>AB253416-1|BAE86927.1| 580|Apis mellifera alpha-glucosidase
protein.
Length = 580
Score = 21.0 bits (42), Expect = 8.9
Identities = 6/22 (27%), Positives = 13/22 (59%)
Frame = +3
Query: 93 ILEKWLVILKKWVGENWVMGNN 158
++++W+ + NWV GN+
Sbjct: 332 LIDRWVANVPNGSVTNWVSGNH 353
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 159,720
Number of Sequences: 438
Number of extensions: 3214
Number of successful extensions: 20
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 16870914
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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