Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte18m23
         (625 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ305404-1|ABD58936.1|  594|Drosophila melanogaster wntless isof...   116   2e-26
AY060600-1|AAL28148.1|  594|Drosophila melanogaster GH01813p pro...   116   2e-26
AE014296-1921|AAF50085.2|  594|Drosophila melanogaster CG6210-PA...   116   2e-26
AE014296-1920|AAN11905.1|  562|Drosophila melanogaster CG6210-PB...   116   2e-26
BT003786-1|AAO41469.1|  441|Drosophila melanogaster LD11194p pro...    28   8.9  
BT001902-1|AAN71691.1|  678|Drosophila melanogaster SD21996p pro...    28   8.9  
BT001534-1|AAN71289.1|  711|Drosophila melanogaster RE08101p pro...    28   8.9  
AY060262-1|AAL25301.1|  441|Drosophila melanogaster GH09289p pro...    28   8.9  
AY058352-1|AAL13581.1|  492|Drosophila melanogaster GH12489p pro...    28   8.9  
AE014297-2000|AAN13651.2|  441|Drosophila melanogaster CG4898-PI...    28   8.9  
AE014297-1999|AAN13650.1|  441|Drosophila melanogaster CG4898-PC...    28   8.9  
AE014297-1998|AAN13649.2|  678|Drosophila melanogaster CG4898-PH...    28   8.9  
AE014297-1990|AAN13648.2|  711|Drosophila melanogaster CG4898-PE...    28   8.9  
AE014296-2097|AAF49957.1|  492|Drosophila melanogaster CG11534-P...    28   8.9  

>DQ305404-1|ABD58936.1|  594|Drosophila melanogaster wntless isoform
           A protein.
          Length = 594

 Score =  116 bits (280), Expect = 2e-26
 Identities = 65/154 (42%), Positives = 85/154 (55%), Gaps = 5/154 (3%)
 Frame = +3

Query: 150 MTGTIIENLSGRKXXXXXXXXXXXXXXXXXIGGLVAPMPANAQMMIAXXXXXXXXXXXXX 329
           M+GTI+ENLSGRK                 +GGL AP+PA    ++              
Sbjct: 1   MSGTILENLSGRKLSILVATLLLCQVLCFLLGGLYAPLPAGHVTVLGSLCREDHARQNDT 60

Query: 330 XXWFYNRGKGACQNIGLENLHHDLSE--TDFVFAFQMPLPRENMILDYSRWQQNLIGVLQ 503
               Y+RG GAC  +  E +  D ++   + V  FQMPLPR+   LDYSRWQQNLIGVLQ
Sbjct: 61  SFLLYSRGAGACIPVTREEVEQDSTKMANELVHVFQMPLPRDLRDLDYSRWQQNLIGVLQ 120

Query: 504 IDIKYHSLMEIQ--PRSV-ITIDARMAYRNKGRP 596
           ++  Y S  E++  PR + +TID R+AYRNKG P
Sbjct: 121 VEFGYDSSSELREPPRELQLTIDMRLAYRNKGDP 154


>AY060600-1|AAL28148.1|  594|Drosophila melanogaster GH01813p
           protein.
          Length = 594

 Score =  116 bits (280), Expect = 2e-26
 Identities = 65/154 (42%), Positives = 85/154 (55%), Gaps = 5/154 (3%)
 Frame = +3

Query: 150 MTGTIIENLSGRKXXXXXXXXXXXXXXXXXIGGLVAPMPANAQMMIAXXXXXXXXXXXXX 329
           M+GTI+ENLSGRK                 +GGL AP+PA    ++              
Sbjct: 1   MSGTILENLSGRKLSILVATLLLCQVLCFLLGGLYAPLPAGHVTVLGSLCREDHARQNDT 60

Query: 330 XXWFYNRGKGACQNIGLENLHHDLSE--TDFVFAFQMPLPRENMILDYSRWQQNLIGVLQ 503
               Y+RG GAC  +  E +  D ++   + V  FQMPLPR+   LDYSRWQQNLIGVLQ
Sbjct: 61  SFLLYSRGAGACIPVTREEVEQDSTKMANELVHVFQMPLPRDLRDLDYSRWQQNLIGVLQ 120

Query: 504 IDIKYHSLMEIQ--PRSV-ITIDARMAYRNKGRP 596
           ++  Y S  E++  PR + +TID R+AYRNKG P
Sbjct: 121 VEFGYDSSSELREPPRELQLTIDMRLAYRNKGDP 154


>AE014296-1921|AAF50085.2|  594|Drosophila melanogaster CG6210-PA,
           isoform A protein.
          Length = 594

 Score =  116 bits (280), Expect = 2e-26
 Identities = 65/154 (42%), Positives = 85/154 (55%), Gaps = 5/154 (3%)
 Frame = +3

Query: 150 MTGTIIENLSGRKXXXXXXXXXXXXXXXXXIGGLVAPMPANAQMMIAXXXXXXXXXXXXX 329
           M+GTI+ENLSGRK                 +GGL AP+PA    ++              
Sbjct: 1   MSGTILENLSGRKLSILVATLLLCQVLCFLLGGLYAPLPAGHVTVLGSLCREDHARQNDT 60

Query: 330 XXWFYNRGKGACQNIGLENLHHDLSE--TDFVFAFQMPLPRENMILDYSRWQQNLIGVLQ 503
               Y+RG GAC  +  E +  D ++   + V  FQMPLPR+   LDYSRWQQNLIGVLQ
Sbjct: 61  SFLLYSRGAGACIPVTREEVEQDSTKMANELVHVFQMPLPRDLRDLDYSRWQQNLIGVLQ 120

Query: 504 IDIKYHSLMEIQ--PRSV-ITIDARMAYRNKGRP 596
           ++  Y S  E++  PR + +TID R+AYRNKG P
Sbjct: 121 VEFGYDSSSELREPPRELQLTIDMRLAYRNKGDP 154


>AE014296-1920|AAN11905.1|  562|Drosophila melanogaster CG6210-PB,
           isoform B protein.
          Length = 562

 Score =  116 bits (280), Expect = 2e-26
 Identities = 65/154 (42%), Positives = 85/154 (55%), Gaps = 5/154 (3%)
 Frame = +3

Query: 150 MTGTIIENLSGRKXXXXXXXXXXXXXXXXXIGGLVAPMPANAQMMIAXXXXXXXXXXXXX 329
           M+GTI+ENLSGRK                 +GGL AP+PA    ++              
Sbjct: 1   MSGTILENLSGRKLSILVATLLLCQVLCFLLGGLYAPLPAGHVTVLGSLCREDHARQNDT 60

Query: 330 XXWFYNRGKGACQNIGLENLHHDLSE--TDFVFAFQMPLPRENMILDYSRWQQNLIGVLQ 503
               Y+RG GAC  +  E +  D ++   + V  FQMPLPR+   LDYSRWQQNLIGVLQ
Sbjct: 61  SFLLYSRGAGACIPVTREEVEQDSTKMANELVHVFQMPLPRDLRDLDYSRWQQNLIGVLQ 120

Query: 504 IDIKYHSLMEIQ--PRSV-ITIDARMAYRNKGRP 596
           ++  Y S  E++  PR + +TID R+AYRNKG P
Sbjct: 121 VEFGYDSSSELREPPRELQLTIDMRLAYRNKGDP 154


>BT003786-1|AAO41469.1|  441|Drosophila melanogaster LD11194p
           protein.
          Length = 441

 Score = 28.3 bits (60), Expect = 8.9
 Identities = 13/27 (48%), Positives = 17/27 (62%)
 Frame = +2

Query: 143 LQDDWDDN*EFEWSKISCVSYVSTVVS 223
           L DD DDN   EWSK+ C S  + +V+
Sbjct: 207 LADD-DDNQAAEWSKLRCTSEAAEIVA 232


>BT001902-1|AAN71691.1|  678|Drosophila melanogaster SD21996p
           protein.
          Length = 678

 Score = 28.3 bits (60), Expect = 8.9
 Identities = 13/27 (48%), Positives = 17/27 (62%)
 Frame = +2

Query: 143 LQDDWDDN*EFEWSKISCVSYVSTVVS 223
           L DD DDN   EWSK+ C S  + +V+
Sbjct: 444 LADD-DDNQAAEWSKLRCTSEAAEIVA 469


>BT001534-1|AAN71289.1|  711|Drosophila melanogaster RE08101p
           protein.
          Length = 711

 Score = 28.3 bits (60), Expect = 8.9
 Identities = 13/27 (48%), Positives = 17/27 (62%)
 Frame = +2

Query: 143 LQDDWDDN*EFEWSKISCVSYVSTVVS 223
           L DD DDN   EWSK+ C S  + +V+
Sbjct: 432 LADD-DDNQAAEWSKLRCTSEAAEIVA 457


>AY060262-1|AAL25301.1|  441|Drosophila melanogaster GH09289p
           protein.
          Length = 441

 Score = 28.3 bits (60), Expect = 8.9
 Identities = 13/27 (48%), Positives = 17/27 (62%)
 Frame = +2

Query: 143 LQDDWDDN*EFEWSKISCVSYVSTVVS 223
           L DD DDN   EWSK+ C S  + +V+
Sbjct: 207 LADD-DDNQAAEWSKLRCTSEAAEIVA 232


>AY058352-1|AAL13581.1|  492|Drosophila melanogaster GH12489p
           protein.
          Length = 492

 Score = 28.3 bits (60), Expect = 8.9
 Identities = 21/73 (28%), Positives = 30/73 (41%), Gaps = 3/73 (4%)
 Frame = -2

Query: 507 RFGAHRLDSAAISNSLES---CFRAVAAFERRKRSPFRKGHGVNSRGQCSGRRPSRDCKT 337
           R+    L+ A   +SL S      A+ A       P    HG  +R Q + +R   D  T
Sbjct: 123 RYSLQELEEAQEQHSLSSDMVVMNAIRAVVGHHFVPHHPHHGKRNRLQAAAKRNYCDHCT 182

Query: 336 TLSYRFSQLSYPC 298
           T+ +   Q SY C
Sbjct: 183 TIIWSVVQNSYVC 195


>AE014297-2000|AAN13651.2|  441|Drosophila melanogaster CG4898-PI,
           isoform I protein.
          Length = 441

 Score = 28.3 bits (60), Expect = 8.9
 Identities = 13/27 (48%), Positives = 17/27 (62%)
 Frame = +2

Query: 143 LQDDWDDN*EFEWSKISCVSYVSTVVS 223
           L DD DDN   EWSK+ C S  + +V+
Sbjct: 207 LADD-DDNQAAEWSKLRCTSEAAEIVA 232


>AE014297-1999|AAN13650.1|  441|Drosophila melanogaster CG4898-PC,
           isoform C protein.
          Length = 441

 Score = 28.3 bits (60), Expect = 8.9
 Identities = 13/27 (48%), Positives = 17/27 (62%)
 Frame = +2

Query: 143 LQDDWDDN*EFEWSKISCVSYVSTVVS 223
           L DD DDN   EWSK+ C S  + +V+
Sbjct: 207 LADD-DDNQAAEWSKLRCTSEAAEIVA 232


>AE014297-1998|AAN13649.2|  678|Drosophila melanogaster CG4898-PH,
           isoform H protein.
          Length = 678

 Score = 28.3 bits (60), Expect = 8.9
 Identities = 13/27 (48%), Positives = 17/27 (62%)
 Frame = +2

Query: 143 LQDDWDDN*EFEWSKISCVSYVSTVVS 223
           L DD DDN   EWSK+ C S  + +V+
Sbjct: 444 LADD-DDNQAAEWSKLRCTSEAAEIVA 469


>AE014297-1990|AAN13648.2|  711|Drosophila melanogaster CG4898-PE,
           isoform E protein.
          Length = 711

 Score = 28.3 bits (60), Expect = 8.9
 Identities = 13/27 (48%), Positives = 17/27 (62%)
 Frame = +2

Query: 143 LQDDWDDN*EFEWSKISCVSYVSTVVS 223
           L DD DDN   EWSK+ C S  + +V+
Sbjct: 432 LADD-DDNQAAEWSKLRCTSEAAEIVA 457


>AE014296-2097|AAF49957.1|  492|Drosophila melanogaster CG11534-PA
           protein.
          Length = 492

 Score = 28.3 bits (60), Expect = 8.9
 Identities = 21/73 (28%), Positives = 30/73 (41%), Gaps = 3/73 (4%)
 Frame = -2

Query: 507 RFGAHRLDSAAISNSLES---CFRAVAAFERRKRSPFRKGHGVNSRGQCSGRRPSRDCKT 337
           R+    L+ A   +SL S      A+ A       P    HG  +R Q + +R   D  T
Sbjct: 123 RYSLQELEEAQEQHSLSSDMVVMNAIRAVVGHHFVPHHPHHGKRNRLQAAAKRNYCDHCT 182

Query: 336 TLSYRFSQLSYPC 298
           T+ +   Q SY C
Sbjct: 183 TIIWSVVQNSYVC 195


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,814,866
Number of Sequences: 53049
Number of extensions: 557387
Number of successful extensions: 1418
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1338
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1402
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2579793750
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)