Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte18m23
         (625 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z83237-6|CAE17879.1|  549|Caenorhabditis elegans Hypothetical pr...    56   2e-08
Z68106-9|CAE17838.1|  551|Caenorhabditis elegans Hypothetical pr...    28   4.7  
Z49207-10|CAE17907.1|  551|Caenorhabditis elegans Hypothetical p...    28   4.7  
Z46267-15|CAI79255.1| 1100|Caenorhabditis elegans Hypothetical p...    28   6.2  
Z46267-14|CAI79254.1| 1030|Caenorhabditis elegans Hypothetical p...    28   6.2  
Z46267-13|CAH04746.1|  845|Caenorhabditis elegans Hypothetical p...    28   6.2  
Z46267-9|CAA86427.2|  889|Caenorhabditis elegans Hypothetical pr...    28   6.2  
Z46267-8|CAA86424.2| 1030|Caenorhabditis elegans Hypothetical pr...    28   6.2  
Z46267-7|CAA86429.2|  947|Caenorhabditis elegans Hypothetical pr...    28   6.2  
Z46267-6|CAA86428.2| 1215|Caenorhabditis elegans Hypothetical pr...    28   6.2  
U52002-1|AAB37726.1|   51|Caenorhabditis elegans Hypothetical pr...    27   8.2  

>Z83237-6|CAE17879.1|  549|Caenorhabditis elegans Hypothetical
           protein R06B9.6 protein.
          Length = 549

 Score = 56.4 bits (130), Expect = 2e-08
 Identities = 40/146 (27%), Positives = 60/146 (41%), Gaps = 2/146 (1%)
 Frame = +3

Query: 156 GTIIENLSGRKXXXXXXXXXXXXXXXXXIGGLVAPMPANAQMMIAXXXXXXXXXXXXXXX 335
           G +IENLS RK                 IG   AP P++   M                 
Sbjct: 4   GAVIENLSNRKLFVIFAGLLVIQIMFFLIGAWYAPSPSS--YMEFEMITCRDETKGLSGE 61

Query: 336 WFYNRGKGACQNIG--LENLHHDLSETDFVFAFQMPLPRENMILDYSRWQQNLIGVLQID 509
           W +   +  CQ I    E         + VF  +MP  R+ + L+YS W Q L+GVL +D
Sbjct: 62  WIH---RDNCQQISELSEYTPSSFDLREIVFIAKMPHTRDGIELEYSPWFQFLLGVLHVD 118

Query: 510 IKYHSLMEIQPRSVITIDARMAYRNK 587
           ++Y    +    + + ++ RM YR+K
Sbjct: 119 VEYSEHFKYVAHAPLELEVRMGYRDK 144


>Z68106-9|CAE17838.1|  551|Caenorhabditis elegans Hypothetical
           protein F41E7.9 protein.
          Length = 551

 Score = 28.3 bits (60), Expect = 4.7
 Identities = 18/65 (27%), Positives = 25/65 (38%)
 Frame = +2

Query: 416 RFRLSNAATARKHDSRLFEMAAESNRCAPNRHQISFFDGNTASQCNNDRRAHGIQKQRXT 595
           RF   ++ TAR HD    +   E NR        S  +  T +    D  + G Q+    
Sbjct: 67  RFNTDSSNTARSHDKASSKYINEDNRQYHPSEPQSISNSTTTTNSMTDSSSIGNQENNNQ 126

Query: 596 PKNNG 610
             NNG
Sbjct: 127 FMNNG 131


>Z49207-10|CAE17907.1|  551|Caenorhabditis elegans Hypothetical
           protein F41E7.9 protein.
          Length = 551

 Score = 28.3 bits (60), Expect = 4.7
 Identities = 18/65 (27%), Positives = 25/65 (38%)
 Frame = +2

Query: 416 RFRLSNAATARKHDSRLFEMAAESNRCAPNRHQISFFDGNTASQCNNDRRAHGIQKQRXT 595
           RF   ++ TAR HD    +   E NR        S  +  T +    D  + G Q+    
Sbjct: 67  RFNTDSSNTARSHDKASSKYINEDNRQYHPSEPQSISNSTTTTNSMTDSSSIGNQENNNQ 126

Query: 596 PKNNG 610
             NNG
Sbjct: 127 FMNNG 131


>Z46267-15|CAI79255.1| 1100|Caenorhabditis elegans Hypothetical
            protein F49E2.5j protein.
          Length = 1100

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 14/55 (25%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
 Frame = +3

Query: 459  LDYSRWQQNLIGVLQIDIKYHSLMEIQPRSVITIDARM-AYRNKGRPRRTMEAIH 620
            +  +++Q+N+  ++Q  +  H ++EI P   + IDA++     K  P   ME ++
Sbjct: 949  MSQTQFQKNVEKLVQATLAKHDIVEIDPTVKLRIDAQLIKLSEKKAPAVVMEHVN 1003


>Z46267-14|CAI79254.1| 1030|Caenorhabditis elegans Hypothetical
            protein F49E2.5i protein.
          Length = 1030

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 14/55 (25%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
 Frame = +3

Query: 459  LDYSRWQQNLIGVLQIDIKYHSLMEIQPRSVITIDARM-AYRNKGRPRRTMEAIH 620
            +  +++Q+N+  ++Q  +  H ++EI P   + IDA++     K  P   ME ++
Sbjct: 879  MSQTQFQKNVEKLVQATLAKHDIVEIDPTVKLRIDAQLIKLSEKKAPAVVMEHVN 933


>Z46267-13|CAH04746.1|  845|Caenorhabditis elegans Hypothetical
           protein F49E2.5h protein.
          Length = 845

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 14/55 (25%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
 Frame = +3

Query: 459 LDYSRWQQNLIGVLQIDIKYHSLMEIQPRSVITIDARM-AYRNKGRPRRTMEAIH 620
           +  +++Q+N+  ++Q  +  H ++EI P   + IDA++     K  P   ME ++
Sbjct: 694 MSQTQFQKNVEKLVQATLAKHDIVEIDPTVKLRIDAQLIKLSEKKAPAVVMEHVN 748


>Z46267-9|CAA86427.2|  889|Caenorhabditis elegans Hypothetical
           protein F49E2.5d protein.
          Length = 889

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 14/55 (25%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
 Frame = +3

Query: 459 LDYSRWQQNLIGVLQIDIKYHSLMEIQPRSVITIDARM-AYRNKGRPRRTMEAIH 620
           +  +++Q+N+  ++Q  +  H ++EI P   + IDA++     K  P   ME ++
Sbjct: 738 MSQTQFQKNVEKLVQATLAKHDIVEIDPTVKLRIDAQLIKLSEKKAPAVVMEHVN 792


>Z46267-8|CAA86424.2| 1030|Caenorhabditis elegans Hypothetical protein
            F49E2.5c protein.
          Length = 1030

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 14/55 (25%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
 Frame = +3

Query: 459  LDYSRWQQNLIGVLQIDIKYHSLMEIQPRSVITIDARM-AYRNKGRPRRTMEAIH 620
            +  +++Q+N+  ++Q  +  H ++EI P   + IDA++     K  P   ME ++
Sbjct: 879  MSQTQFQKNVEKLVQATLAKHDIVEIDPTVKLRIDAQLIKLSEKKAPAVVMEHVN 933


>Z46267-7|CAA86429.2|  947|Caenorhabditis elegans Hypothetical
           protein F49E2.5b protein.
          Length = 947

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 14/55 (25%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
 Frame = +3

Query: 459 LDYSRWQQNLIGVLQIDIKYHSLMEIQPRSVITIDARM-AYRNKGRPRRTMEAIH 620
           +  +++Q+N+  ++Q  +  H ++EI P   + IDA++     K  P   ME ++
Sbjct: 796 MSQTQFQKNVEKLVQATLAKHDIVEIDPTVKLRIDAQLIKLSEKKAPAVVMEHVN 850


>Z46267-6|CAA86428.2| 1215|Caenorhabditis elegans Hypothetical protein
            F49E2.5a protein.
          Length = 1215

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 14/55 (25%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
 Frame = +3

Query: 459  LDYSRWQQNLIGVLQIDIKYHSLMEIQPRSVITIDARM-AYRNKGRPRRTMEAIH 620
            +  +++Q+N+  ++Q  +  H ++EI P   + IDA++     K  P   ME ++
Sbjct: 1064 MSQTQFQKNVEKLVQATLAKHDIVEIDPTVKLRIDAQLIKLSEKKAPAVVMEHVN 1118


>U52002-1|AAB37726.1|   51|Caenorhabditis elegans Hypothetical
           protein F08B4.3 protein.
          Length = 51

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 11/28 (39%), Positives = 18/28 (64%)
 Frame = -3

Query: 197 HS*FSTTQILNYRPSHLEDVYSFEHLIR 114
           H+ +ST ++LN RP+   D++S    IR
Sbjct: 21  HTKYSTPEVLNGRPTKSSDIFSLGMTIR 48


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,417,717
Number of Sequences: 27780
Number of extensions: 290117
Number of successful extensions: 729
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 704
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 728
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1363963182
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)