Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte18m21
(496 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X77020-1|CAA54318.1| 158|Caenorhabditis elegans copper/zinc sup... 122 1e-28
L20135-1|AAA28147.1| 158|Caenorhabditis elegans superoxide dism... 122 1e-28
AC006608-8|AAV34795.1| 158|Caenorhabditis elegans Sod (superoxi... 122 1e-28
AC006608-7|AAF39759.1| 180|Caenorhabditis elegans Sod (superoxi... 122 1e-28
Z27080-4|CAB61015.1| 176|Caenorhabditis elegans Hypothetical pr... 122 2e-28
AB190513-1|BAD51397.1| 221|Caenorhabditis elegans superoxide di... 122 2e-28
AB003924-1|BAA28262.1| 176|Caenorhabditis elegans SOD4-1 protein. 122 2e-28
U42833-3|AAA83577.1| 178|Caenorhabditis elegans Sod (superoxide... 109 8e-25
Z81110-6|CAB03260.2| 1011|Caenorhabditis elegans Hypothetical pr... 41 4e-04
Z81110-2|CAB03259.1| 802|Caenorhabditis elegans Hypothetical pr... 41 4e-04
AL132948-1|CAC51077.1| 735|Caenorhabditis elegans Hypothetical ... 29 2.4
AC006695-16|AAK71874.1| 364|Caenorhabditis elegans Seven tm rec... 28 3.2
Z79756-1|CAB02120.2| 494|Caenorhabditis elegans Hypothetical pr... 28 4.3
AF229855-1|AAF71303.1| 1497|Caenorhabditis elegans dual oxidase ... 27 7.5
AF043697-1|AAK73882.1| 1497|Caenorhabditis elegans Blistered cut... 27 7.5
AF003139-11|AAK73871.1| 1503|Caenorhabditis elegans Hypothetical... 27 7.5
AC024830-9|ABQ13052.1| 1594|Caenorhabditis elegans Hypothetical ... 27 7.5
U41538-3|AAP31431.1| 142|Caenorhabditis elegans Hypothetical pr... 27 9.9
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 27 9.9
L11247-9|AAK84522.2| 639|Caenorhabditis elegans Hypothetical pr... 27 9.9
AF125964-1|AAD14753.1| 471|Caenorhabditis elegans Hypothetical ... 27 9.9
>X77020-1|CAA54318.1| 158|Caenorhabditis elegans copper/zinc
superoxide dismutase protein.
Length = 158
Score = 122 bits (295), Expect = 1e-28
Identities = 57/126 (45%), Positives = 80/126 (63%), Gaps = 1/126 (0%)
Frame = +1
Query: 103 SRAIAFLSTETIRGNITFTQVQDG-KVHVQGGITGLPPGEYGFHVHEKGDLSGGCVSTGS 279
+RA+A L ET+ G I TQ + + ++G I GL PG +GFHVH+ GD + GC+S G
Sbjct: 3 NRAVAVLRGETVTGTIWITQKSENDQAVIEGEIKGLTPGLHGFHVHQYGDSTNGCISAGP 62
Query: 280 HFNPEHKDHGHPNDVNRHVGDLGNVVFDENHYSRIDLVDDQISLSGPHGIIGRAVVLHEK 459
HFNP K HG P RHVGDLGNV + ++I L D ++L GP+ ++GR++V+H
Sbjct: 63 HFNPFGKTHGGPKSEIRHVGDLGNVEAGADGVAKIKLTDTLVTLYGPNTVVGRSMVVHAG 122
Query: 460 ADDYGK 477
DD G+
Sbjct: 123 QDDLGE 128
>L20135-1|AAA28147.1| 158|Caenorhabditis elegans superoxide
dismutase protein.
Length = 158
Score = 122 bits (295), Expect = 1e-28
Identities = 57/126 (45%), Positives = 80/126 (63%), Gaps = 1/126 (0%)
Frame = +1
Query: 103 SRAIAFLSTETIRGNITFTQVQDG-KVHVQGGITGLPPGEYGFHVHEKGDLSGGCVSTGS 279
+RA+A L ET+ G I TQ + + ++G I GL PG +GFHVH+ GD + GC+S G
Sbjct: 3 NRAVAVLRGETVTGTIWITQKSENDQAVIEGEIKGLTPGLHGFHVHQYGDSTNGCISAGP 62
Query: 280 HFNPEHKDHGHPNDVNRHVGDLGNVVFDENHYSRIDLVDDQISLSGPHGIIGRAVVLHEK 459
HFNP K HG P RHVGDLGNV + ++I L D ++L GP+ ++GR++V+H
Sbjct: 63 HFNPFGKTHGGPKSEIRHVGDLGNVEAGADGVAKIKLTDTLVTLYGPNTVVGRSMVVHAG 122
Query: 460 ADDYGK 477
DD G+
Sbjct: 123 QDDLGE 128
>AC006608-8|AAV34795.1| 158|Caenorhabditis elegans Sod (superoxide
dismutase) protein1, isoform b protein.
Length = 158
Score = 122 bits (295), Expect = 1e-28
Identities = 57/126 (45%), Positives = 80/126 (63%), Gaps = 1/126 (0%)
Frame = +1
Query: 103 SRAIAFLSTETIRGNITFTQVQDG-KVHVQGGITGLPPGEYGFHVHEKGDLSGGCVSTGS 279
+RA+A L ET+ G I TQ + + ++G I GL PG +GFHVH+ GD + GC+S G
Sbjct: 3 NRAVAVLRGETVTGTIWITQKSENDQAVIEGEIKGLTPGLHGFHVHQYGDSTNGCISAGP 62
Query: 280 HFNPEHKDHGHPNDVNRHVGDLGNVVFDENHYSRIDLVDDQISLSGPHGIIGRAVVLHEK 459
HFNP K HG P RHVGDLGNV + ++I L D ++L GP+ ++GR++V+H
Sbjct: 63 HFNPFGKTHGGPKSEIRHVGDLGNVEAGADGVAKIKLTDTLVTLYGPNTVVGRSMVVHAG 122
Query: 460 ADDYGK 477
DD G+
Sbjct: 123 QDDLGE 128
>AC006608-7|AAF39759.1| 180|Caenorhabditis elegans Sod (superoxide
dismutase) protein1, isoform a protein.
Length = 180
Score = 122 bits (295), Expect = 1e-28
Identities = 57/126 (45%), Positives = 80/126 (63%), Gaps = 1/126 (0%)
Frame = +1
Query: 103 SRAIAFLSTETIRGNITFTQVQDG-KVHVQGGITGLPPGEYGFHVHEKGDLSGGCVSTGS 279
+RA+A L ET+ G I TQ + + ++G I GL PG +GFHVH+ GD + GC+S G
Sbjct: 25 NRAVAVLRGETVTGTIWITQKSENDQAVIEGEIKGLTPGLHGFHVHQYGDSTNGCISAGP 84
Query: 280 HFNPEHKDHGHPNDVNRHVGDLGNVVFDENHYSRIDLVDDQISLSGPHGIIGRAVVLHEK 459
HFNP K HG P RHVGDLGNV + ++I L D ++L GP+ ++GR++V+H
Sbjct: 85 HFNPFGKTHGGPKSEIRHVGDLGNVEAGADGVAKIKLTDTLVTLYGPNTVVGRSMVVHAG 144
Query: 460 ADDYGK 477
DD G+
Sbjct: 145 QDDLGE 150
>Z27080-4|CAB61015.1| 176|Caenorhabditis elegans Hypothetical
protein F55H2.1 protein.
Length = 176
Score = 122 bits (293), Expect = 2e-28
Identities = 57/125 (45%), Positives = 77/125 (61%)
Frame = +1
Query: 121 LSTETIRGNITFTQVQDGKVHVQGGITGLPPGEYGFHVHEKGDLSGGCVSTGSHFNPEHK 300
+ TE I G I F Q + + G ++GL G++GFH+HEKGD GC+S G H+NP
Sbjct: 36 IPTELI-GTIDFDQ-SGSFLKLNGSVSGLAAGKHGFHIHEKGDTGNGCLSAGGHYNPHKL 93
Query: 301 DHGHPNDVNRHVGDLGNVVFDENHYSRIDLVDDQISLSGPHGIIGRAVVLHEKADDYGKS 480
HG P+D NRH+GDLGN+ + + I + D SLSG + IIGR+VV+HEK DD G+
Sbjct: 94 SHGAPDDSNRHIGDLGNIESPASGDTLISVSDSLASLSGQYSIIGRSVVIHEKTDDLGRG 153
Query: 481 DHPDS 495
S
Sbjct: 154 TSDQS 158
>AB190513-1|BAD51397.1| 221|Caenorhabditis elegans superoxide
dismutase protein.
Length = 221
Score = 122 bits (293), Expect = 2e-28
Identities = 57/125 (45%), Positives = 77/125 (61%)
Frame = +1
Query: 121 LSTETIRGNITFTQVQDGKVHVQGGITGLPPGEYGFHVHEKGDLSGGCVSTGSHFNPEHK 300
+ TE I G I F Q + + G ++GL G++GFH+HEKGD GC+S G H+NP
Sbjct: 36 IPTELI-GTIDFDQ-SGSFLKLNGSVSGLAAGKHGFHIHEKGDTGNGCLSAGGHYNPHKL 93
Query: 301 DHGHPNDVNRHVGDLGNVVFDENHYSRIDLVDDQISLSGPHGIIGRAVVLHEKADDYGKS 480
HG P+D NRH+GDLGN+ + + I + D SLSG + IIGR+VV+HEK DD G+
Sbjct: 94 SHGAPDDSNRHIGDLGNIESPASGDTLISVSDSLASLSGQYSIIGRSVVIHEKTDDLGRG 153
Query: 481 DHPDS 495
S
Sbjct: 154 TSDQS 158
>AB003924-1|BAA28262.1| 176|Caenorhabditis elegans SOD4-1 protein.
Length = 176
Score = 122 bits (293), Expect = 2e-28
Identities = 57/125 (45%), Positives = 77/125 (61%)
Frame = +1
Query: 121 LSTETIRGNITFTQVQDGKVHVQGGITGLPPGEYGFHVHEKGDLSGGCVSTGSHFNPEHK 300
+ TE I G I F Q + + G ++GL G++GFH+HEKGD GC+S G H+NP
Sbjct: 36 IPTELI-GTIDFDQ-SGSFLKLNGSVSGLAAGKHGFHIHEKGDTGNGCLSAGGHYNPHKL 93
Query: 301 DHGHPNDVNRHVGDLGNVVFDENHYSRIDLVDDQISLSGPHGIIGRAVVLHEKADDYGKS 480
HG P+D NRH+GDLGN+ + + I + D SLSG + IIGR+VV+HEK DD G+
Sbjct: 94 SHGAPDDSNRHIGDLGNIESPASGDTLISVSDSLASLSGQYSIIGRSVVIHEKTDDLGRG 153
Query: 481 DHPDS 495
S
Sbjct: 154 TSDQS 158
>U42833-3|AAA83577.1| 178|Caenorhabditis elegans Sod (superoxide
dismutase) protein5 protein.
Length = 178
Score = 109 bits (263), Expect = 8e-25
Identities = 53/125 (42%), Positives = 75/125 (60%), Gaps = 1/125 (0%)
Frame = +1
Query: 106 RAIAFLSTETIRGNITFTQVQDGK-VHVQGGITGLPPGEYGFHVHEKGDLSGGCVSTGSH 282
RA+A L + G + TQ +G+ +G I GL PG +GFH+H+ GD + GC S G H
Sbjct: 24 RAVAVLRGTAVFGTVWLTQKAEGEETEFEGEIKGLSPGLHGFHIHQYGDSTDGCTSAGPH 83
Query: 283 FNPEHKDHGHPNDVNRHVGDLGNVVFDENHYSRIDLVDDQISLSGPHGIIGRAVVLHEKA 462
FNP +HG + V RHVGDLGNV + ++I D +SL G + +IGR++V+H
Sbjct: 84 FNPCKMNHGGRDSVVRHVGDLGNVEAGADGVAKIKFSDKVVSLFGANTVIGRSMVVHVDR 143
Query: 463 DDYGK 477
DD G+
Sbjct: 144 DDLGQ 148
>Z81110-6|CAB03260.2| 1011|Caenorhabditis elegans Hypothetical protein
T01D3.3b protein.
Length = 1011
Score = 41.1 bits (92), Expect = 4e-04
Identities = 22/71 (30%), Positives = 34/71 (47%), Gaps = 2/71 (2%)
Frame = +1
Query: 82 HHGFTTPSRAIAFLSTETIR--GNITFTQVQDGKVHVQGGITGLPPGEYGFHVHEKGDLS 255
H F + A+A L T G TF+Q+ + + G + LP G + +H+ GD S
Sbjct: 875 HDAFVDDTIAVAILITREGAHIGRFTFSQLTSTALRIHGEVYTLPVGRHAVVLHQFGDSS 934
Query: 256 GGCVSTGSHFN 288
GC G+ F+
Sbjct: 935 EGCSRVGAPFS 945
>Z81110-2|CAB03259.1| 802|Caenorhabditis elegans Hypothetical
protein T01D3.3a protein.
Length = 802
Score = 41.1 bits (92), Expect = 4e-04
Identities = 22/71 (30%), Positives = 34/71 (47%), Gaps = 2/71 (2%)
Frame = +1
Query: 82 HHGFTTPSRAIAFLSTETIR--GNITFTQVQDGKVHVQGGITGLPPGEYGFHVHEKGDLS 255
H F + A+A L T G TF+Q+ + + G + LP G + +H+ GD S
Sbjct: 666 HDAFVDDTIAVAILITREGAHIGRFTFSQLTSTALRIHGEVYTLPVGRHAVVLHQFGDSS 725
Query: 256 GGCVSTGSHFN 288
GC G+ F+
Sbjct: 726 EGCSRVGAPFS 736
>AL132948-1|CAC51077.1| 735|Caenorhabditis elegans Hypothetical
protein Y39B6A.1 protein.
Length = 735
Score = 28.7 bits (61), Expect = 2.4
Identities = 13/36 (36%), Positives = 14/36 (38%)
Frame = +3
Query: 93 HHAVPRHCLSIHRND*RQHHIHSGSRWEGPRSGGHH 200
HH P H H + HH H G P GHH
Sbjct: 509 HHHAPAH--HGHHGEHGTHHGHHGEHHHAPAHHGHH 542
>AC006695-16|AAK71874.1| 364|Caenorhabditis elegans Seven tm
receptor protein 206 protein.
Length = 364
Score = 28.3 bits (60), Expect = 3.2
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = -3
Query: 485 WSLLP*SSAFSWSTTALPMIPCGPDSEIWSSTRSILL 375
W L+P + F W T AL I CGP + + R+ L+
Sbjct: 137 WMLMPIINGFIWGTVAL--ICCGPKDVLTNYIRNNLM 171
>Z79756-1|CAB02120.2| 494|Caenorhabditis elegans Hypothetical
protein F53C11.1 protein.
Length = 494
Score = 27.9 bits (59), Expect = 4.3
Identities = 17/43 (39%), Positives = 22/43 (51%), Gaps = 4/43 (9%)
Frame = +1
Query: 97 TPSRAIAFLSTETIRGNITFTQVQDG----KVHVQGGITGLPP 213
TPS + F S+ET+R NI V G K+ V+ G G P
Sbjct: 370 TPSYSTNFTSSETVRFNINLPDVVIGDPGAKIRVEFGAPGKTP 412
>AF229855-1|AAF71303.1| 1497|Caenorhabditis elegans dual oxidase
protein.
Length = 1497
Score = 27.1 bits (57), Expect = 7.5
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = +1
Query: 319 DVNRHVGDLGNVVFDENHYSRIDLVDDQISLSGPHGI 429
D N V DL + +F H+SR+D+V I +G+
Sbjct: 391 DDNIVVEDLRDYIFGPMHFSRLDVVASSIMRGRDNGV 427
>AF043697-1|AAK73882.1| 1497|Caenorhabditis elegans Blistered
cuticle protein 3 protein.
Length = 1497
Score = 27.1 bits (57), Expect = 7.5
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = +1
Query: 319 DVNRHVGDLGNVVFDENHYSRIDLVDDQISLSGPHGI 429
D N V DL + +F H+SR+D+V I +G+
Sbjct: 391 DDNIVVEDLRDYIFGPMHFSRLDVVASSIMRGRDNGV 427
>AF003139-11|AAK73871.1| 1503|Caenorhabditis elegans Hypothetical
protein F53G12.3 protein.
Length = 1503
Score = 27.1 bits (57), Expect = 7.5
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = +1
Query: 319 DVNRHVGDLGNVVFDENHYSRIDLVDDQISLSGPHGI 429
D N V DL + +F H+SR+D+V I +G+
Sbjct: 401 DDNIVVEDLRDYIFGPMHFSRLDVVASSIMRGRDNGV 437
>AC024830-9|ABQ13052.1| 1594|Caenorhabditis elegans Hypothetical
protein Y55F3BR.2 protein.
Length = 1594
Score = 27.1 bits (57), Expect = 7.5
Identities = 12/27 (44%), Positives = 13/27 (48%)
Frame = +1
Query: 211 PGEYGFHVHEKGDLSGGCVSTGSHFNP 291
PGE FH EK L C + G F P
Sbjct: 1019 PGEVAFHQDEKTQLPTTCTNEGFSFCP 1045
>U41538-3|AAP31431.1| 142|Caenorhabditis elegans Hypothetical
protein R04E5.8b protein.
Length = 142
Score = 26.6 bits (56), Expect = 9.9
Identities = 12/36 (33%), Positives = 16/36 (44%)
Frame = +3
Query: 93 HHAVPRHCLSIHRND*RQHHIHSGSRWEGPRSGGHH 200
HH PR+ H D +H H G+R + HH
Sbjct: 75 HHGPPRN----HNQDRNRHRNHDGNRHQNQDRSRHH 106
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical protein
R04E5.8a protein.
Length = 997
Score = 26.6 bits (56), Expect = 9.9
Identities = 12/36 (33%), Positives = 16/36 (44%)
Frame = +3
Query: 93 HHAVPRHCLSIHRND*RQHHIHSGSRWEGPRSGGHH 200
HH PR+ H D +H H G+R + HH
Sbjct: 919 HHGPPRN----HNQDRNRHRNHDGNRHQNQDRSRHH 950
>L11247-9|AAK84522.2| 639|Caenorhabditis elegans Hypothetical
protein F09G8.8 protein.
Length = 639
Score = 26.6 bits (56), Expect = 9.9
Identities = 17/41 (41%), Positives = 20/41 (48%)
Frame = +1
Query: 88 GFTTPSRAIAFLSTETIRGNITFTQVQDGKVHVQGGITGLP 210
G+TTP + I ST T R T T V K G+TG P
Sbjct: 222 GWTTPKQEICTTSTTTTRAPTTTTTVTTVK-----GVTGKP 257
>AF125964-1|AAD14753.1| 471|Caenorhabditis elegans Hypothetical
protein W03G1.5 protein.
Length = 471
Score = 26.6 bits (56), Expect = 9.9
Identities = 15/40 (37%), Positives = 17/40 (42%), Gaps = 3/40 (7%)
Frame = +3
Query: 93 HHAVPRHCLSIHRND*RQ---HHIHSGSRWEGPRSGGHHW 203
HH P H R+ R HH H G R P G HH+
Sbjct: 396 HHGPPHHHHHDGRSPSRHGHHHHHHHGCRPFPPHHGHHHF 435
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.314 0.137 0.418
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,968,477
Number of Sequences: 27780
Number of extensions: 270758
Number of successful extensions: 520
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 494
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 514
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 935344784
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
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