Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte18m16
(638 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U64842-2|AAB37084.1| 462|Caenorhabditis elegans Hypothetical pr... 211 4e-55
U12787-1|AAA92672.1| 458|Caenorhabditis elegans HMG CoA synthas... 211 4e-55
AC006683-1|AAK71395.4| 954|Caenorhabditis elegans Adenylyl cycl... 30 1.6
AL031635-4|CAA21043.2| 269|Caenorhabditis elegans Hypothetical ... 29 2.1
Z78018-7|CAB01449.2| 2577|Caenorhabditis elegans Hypothetical pr... 28 4.9
Z78013-10|CAB01427.2| 2577|Caenorhabditis elegans Hypothetical p... 28 4.9
AY314773-1|AAQ84880.1| 2596|Caenorhabditis elegans flamingo-like... 28 4.9
AF100670-1|AAN73858.1| 420|Caenorhabditis elegans Puf (pumilio/... 28 4.9
Z81479-1|CAB03944.1| 1043|Caenorhabditis elegans Hypothetical pr... 28 6.5
>U64842-2|AAB37084.1| 462|Caenorhabditis elegans Hypothetical
protein F25B4.6 protein.
Length = 462
Score = 211 bits (515), Expect = 4e-55
Identities = 108/173 (62%), Positives = 129/173 (74%), Gaps = 1/173 (0%)
Frame = +2
Query: 122 VENVGILAMELYFPSQYVDQTELEKFDEVSTGKYTIGLGQSKMGFCSDREDINSICLTAL 301
V +VGI A+ELYFP +VDQ +LEKF+ VS+GKYTIGLGQ +MGFCSD EDI SI LT
Sbjct: 11 VTDVGIGAIELYFPQNFVDQNDLEKFNNVSSGKYTIGLGQQQMGFCSDNEDIVSISLTVT 70
Query: 302 HRLIDKQKINLHDIGRLEVGTETIIDKSKSVKTFLMTLFAKEGATDIEGIDTTNACYGGT 481
+LI+ KI+ IG L VGTET+IDKSKSVKT LM LF G +DIEG+D NAC+GG
Sbjct: 71 RKLIETYKISTDSIGCLVVGTETMIDKSKSVKTALMDLF--PGNSDIEGVDIKNACFGGA 128
Query: 482 AALFNAINWVE-SSSWDGRKAIVVAGDIAVYGKGPARPTGGAGAVAMLIGPDA 637
AL +AI+WV + D + AIVV DIA+Y +GPAR TGGAGA+A LI PDA
Sbjct: 129 QALLHAIDWVTVNHPLDKKNAIVVVADIAIYEEGPARCTGGAGAIAFLICPDA 181
>U12787-1|AAA92672.1| 458|Caenorhabditis elegans HMG CoA synthase
protein.
Length = 458
Score = 211 bits (515), Expect = 4e-55
Identities = 108/173 (62%), Positives = 129/173 (74%), Gaps = 1/173 (0%)
Frame = +2
Query: 122 VENVGILAMELYFPSQYVDQTELEKFDEVSTGKYTIGLGQSKMGFCSDREDINSICLTAL 301
V +VGI A+ELYFP +VDQ +LEKF+ VS+GKYTIGLGQ +MGFCSD EDI SI LT
Sbjct: 7 VTDVGIGAIELYFPQNFVDQNDLEKFNNVSSGKYTIGLGQQQMGFCSDNEDIVSISLTVT 66
Query: 302 HRLIDKQKINLHDIGRLEVGTETIIDKSKSVKTFLMTLFAKEGATDIEGIDTTNACYGGT 481
+LI+ KI+ IG L VGTET+IDKSKSVKT LM LF G +DIEG+D NAC+GG
Sbjct: 67 RKLIETYKISTDSIGCLVVGTETMIDKSKSVKTALMDLF--PGNSDIEGVDIKNACFGGA 124
Query: 482 AALFNAINWVE-SSSWDGRKAIVVAGDIAVYGKGPARPTGGAGAVAMLIGPDA 637
AL +AI+WV + D + AIVV DIA+Y +GPAR TGGAGA+A LI PDA
Sbjct: 125 QALLHAIDWVTVNHPLDKKNAIVVVADIAIYEEGPARCTGGAGAIAFLICPDA 177
>AC006683-1|AAK71395.4| 954|Caenorhabditis elegans Adenylyl cyclase
protein 4 protein.
Length = 954
Score = 29.9 bits (64), Expect = 1.6
Identities = 15/65 (23%), Positives = 28/65 (43%), Gaps = 1/65 (1%)
Frame = +2
Query: 167 QYVDQTELEKFDEVSTGKYTIGLGQSKMGF-CSDREDINSICLTALHRLIDKQKINLHDI 343
Q +D+ E +K +++ T T + G C D + +I L A L+ + N+H
Sbjct: 799 QILDREEFKKIEKIKTISTTYMVASGLAGRECGDNSHVEAIALFARELLVKLESTNIHSF 858
Query: 344 GRLEV 358
+
Sbjct: 859 NNFNL 863
>AL031635-4|CAA21043.2| 269|Caenorhabditis elegans Hypothetical
protein Y47D3B.6 protein.
Length = 269
Score = 29.5 bits (63), Expect = 2.1
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = -3
Query: 618 IATAPAPPVGLAGPFP*TAMSPATTMAFLPS 526
I TA APP+ +A P P A +PA A+ P+
Sbjct: 45 IPTAAAPPMMMAPPAPLPAYAPAPLPAYAPA 75
>Z78018-7|CAB01449.2| 2577|Caenorhabditis elegans Hypothetical protein
F15B9.7 protein.
Length = 2577
Score = 28.3 bits (60), Expect = 4.9
Identities = 25/85 (29%), Positives = 43/85 (50%), Gaps = 9/85 (10%)
Frame = -2
Query: 325 LLFVN*SVQGCETNRIDVFTI----RTETHFTLAQ----TNSVLASRHLIKFF*FSLINV 170
L+ +N + CE NRI VFT+ ++ + +AQ T+ +A L F L+ +
Sbjct: 2172 LIGLNLTHAACEYNRIGVFTMFVNDQSSSIVRVAQMDNMTSPAIAGVALFLCFLSILLTL 2231
Query: 169 LRREIKFHG-EYAYILNFSAHIYSI 98
RR +K H +IL F+ +I ++
Sbjct: 2232 SRRSLKTHSVRIGFILFFAINILNL 2256
>Z78013-10|CAB01427.2| 2577|Caenorhabditis elegans Hypothetical
protein F15B9.7 protein.
Length = 2577
Score = 28.3 bits (60), Expect = 4.9
Identities = 25/85 (29%), Positives = 43/85 (50%), Gaps = 9/85 (10%)
Frame = -2
Query: 325 LLFVN*SVQGCETNRIDVFTI----RTETHFTLAQ----TNSVLASRHLIKFF*FSLINV 170
L+ +N + CE NRI VFT+ ++ + +AQ T+ +A L F L+ +
Sbjct: 2172 LIGLNLTHAACEYNRIGVFTMFVNDQSSSIVRVAQMDNMTSPAIAGVALFLCFLSILLTL 2231
Query: 169 LRREIKFHG-EYAYILNFSAHIYSI 98
RR +K H +IL F+ +I ++
Sbjct: 2232 SRRSLKTHSVRIGFILFFAINILNL 2256
>AY314773-1|AAQ84880.1| 2596|Caenorhabditis elegans flamingo-like
protein FMI-1 protein.
Length = 2596
Score = 28.3 bits (60), Expect = 4.9
Identities = 25/85 (29%), Positives = 43/85 (50%), Gaps = 9/85 (10%)
Frame = -2
Query: 325 LLFVN*SVQGCETNRIDVFTI----RTETHFTLAQ----TNSVLASRHLIKFF*FSLINV 170
L+ +N + CE NRI VFT+ ++ + +AQ T+ +A L F L+ +
Sbjct: 2191 LIGLNLTHAACEYNRIGVFTMFVNDQSSSIVRVAQMDNMTSPAIAGVALFLCFLSILLTL 2250
Query: 169 LRREIKFHG-EYAYILNFSAHIYSI 98
RR +K H +IL F+ +I ++
Sbjct: 2251 SRRSLKTHSVRIGFILFFAINILNL 2275
>AF100670-1|AAN73858.1| 420|Caenorhabditis elegans Puf
(pumilio/fbf) domain-containingprotein 4 protein.
Length = 420
Score = 28.3 bits (60), Expect = 4.9
Identities = 13/52 (25%), Positives = 26/52 (50%), Gaps = 2/52 (3%)
Frame = +2
Query: 377 DKSKSVKTFLMTLFAKEGATDIEGIDTTNAC--YGGTAALFNAINWVESSSW 526
++ K + +L + A A+++ G+D T+AC G + + + SSW
Sbjct: 222 EEQKIIVEYLAIVLASRLASELRGVDLTHACIDQNGNHVIQQLLKTLPPSSW 273
>Z81479-1|CAB03944.1| 1043|Caenorhabditis elegans Hypothetical
protein C34F6.1 protein.
Length = 1043
Score = 27.9 bits (59), Expect = 6.5
Identities = 18/73 (24%), Positives = 27/73 (36%)
Frame = -3
Query: 636 ASGPINIATAPAPPVGLAGPFP*TAMSPATTMAFLPSQDEDSTQFMALKRAAVPP*QALV 457
A GPI PAPP+ P + + P T + Q + + PP
Sbjct: 77 APGPIRPVVNPAPPLPTLPTPPPSTLPPITYPRPTVGAPITTQQVLITETTTQPPTTTTT 136
Query: 456 VSIPSMSVAPSLA 418
+ P+ PS+A
Sbjct: 137 LETPAPESTPSMA 149
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,021,541
Number of Sequences: 27780
Number of extensions: 288073
Number of successful extensions: 867
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 821
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 861
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1416829972
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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