Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte18m15
         (581 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC024200-17|AAF36002.2|  432|Caenorhabditis elegans Hypothetical...    52   2e-07
Z92831-7|CAB07369.2| 2396|Caenorhabditis elegans Hypothetical pr...    28   4.2  
Z81066-8|CAB02974.2| 2396|Caenorhabditis elegans Hypothetical pr...    28   4.2  
Z70783-9|CAA94857.2|  455|Caenorhabditis elegans Hypothetical pr...    28   4.2  
L14433-6|AAA27974.2| 2107|Caenorhabditis elegans Hypothetical pr...    28   5.6  
Z93380-7|CAB07603.2|  335|Caenorhabditis elegans Hypothetical pr...    27   7.4  
Z82053-11|CAB04839.2|  335|Caenorhabditis elegans Hypothetical p...    27   7.4  
AF077544-4|ABD94098.1|  348|Caenorhabditis elegans Hypothetical ...    27   7.4  
AF077544-3|AAK39242.3|  458|Caenorhabditis elegans Hypothetical ...    27   7.4  
Z83731-9|CAH10802.1| 1364|Caenorhabditis elegans Hypothetical pr...    27   9.7  
Z83731-8|CAH10801.1| 1490|Caenorhabditis elegans Hypothetical pr...    27   9.7  
Z81505-5|CAH10795.1| 1364|Caenorhabditis elegans Hypothetical pr...    27   9.7  
Z81505-4|CAH10794.1| 1490|Caenorhabditis elegans Hypothetical pr...    27   9.7  

>AC024200-17|AAF36002.2|  432|Caenorhabditis elegans Hypothetical
           protein Y71F9AL.1 protein.
          Length = 432

 Score = 52.4 bits (120), Expect = 2e-07
 Identities = 30/77 (38%), Positives = 43/77 (55%)
 Frame = +2

Query: 140 LLWFAHEHVDFRHAEINSILSLFKIPIKFIEKPCLEKPYWIVELPSEDCAKKIASRSVLM 319
           L+ F+  HVDFR AE  +I S+F I +   EK       +IV   S    +K+ SRS+L+
Sbjct: 5   LVIFSQSHVDFRIAEFEAICSMFSIKVDLSEKLNTTDHMFIVNFESHLEVRKLLSRSILV 64

Query: 320 KNCIELWSRAKSIDQLH 370
           K  IEL   A+S D ++
Sbjct: 65  KYAIELSIEAESYDIMY 81


>Z92831-7|CAB07369.2| 2396|Caenorhabditis elegans Hypothetical
           protein F22G12.5 protein.
          Length = 2396

 Score = 28.3 bits (60), Expect = 4.2
 Identities = 14/53 (26%), Positives = 25/53 (47%)
 Frame = +2

Query: 77  NRNTKNSWN*CVLEVKMWRRYLLWFAHEHVDFRHAEINSILSLFKIPIKFIEK 235
           + ++ N WN    E K  R    +F  + +DF +++       F   +KF+EK
Sbjct: 369 SEDSSNCWNSANFEPKKLRNCTFFFGRKRLDFYYSKTRKSFE-FSENLKFLEK 420


>Z81066-8|CAB02974.2| 2396|Caenorhabditis elegans Hypothetical
           protein F22G12.5 protein.
          Length = 2396

 Score = 28.3 bits (60), Expect = 4.2
 Identities = 14/53 (26%), Positives = 25/53 (47%)
 Frame = +2

Query: 77  NRNTKNSWN*CVLEVKMWRRYLLWFAHEHVDFRHAEINSILSLFKIPIKFIEK 235
           + ++ N WN    E K  R    +F  + +DF +++       F   +KF+EK
Sbjct: 369 SEDSSNCWNSANFEPKKLRNCTFFFGRKRLDFYYSKTRKSFE-FSENLKFLEK 420


>Z70783-9|CAA94857.2|  455|Caenorhabditis elegans Hypothetical
           protein ZK856.9 protein.
          Length = 455

 Score = 28.3 bits (60), Expect = 4.2
 Identities = 11/36 (30%), Positives = 22/36 (61%)
 Frame = +3

Query: 105 NVYLKLKCGGDIYYGSLTNTLISDMLKSIVFCPYSK 212
           NVY+++    + YYG +T++ I +M ++ V   + K
Sbjct: 296 NVYMEVHANPERYYGIITDSTILEMTRTRVVADFPK 331


>L14433-6|AAA27974.2| 2107|Caenorhabditis elegans Hypothetical
           protein C50C3.2 protein.
          Length = 2107

 Score = 27.9 bits (59), Expect = 5.6
 Identities = 11/21 (52%), Positives = 16/21 (76%)
 Frame = +2

Query: 395 NTTSKWIFENVECAEHICPKE 457
           +TTS+W+ E + CA+ I PKE
Sbjct: 793 STTSEWLREKMICADTIEPKE 813


>Z93380-7|CAB07603.2|  335|Caenorhabditis elegans Hypothetical
           protein T26E3.9 protein.
          Length = 335

 Score = 27.5 bits (58), Expect = 7.4
 Identities = 16/76 (21%), Positives = 31/76 (40%), Gaps = 5/76 (6%)
 Frame = +2

Query: 365 LHINLRKSLQNTTSK-----WIFENVECAEHICPKELIDVCCSPNSSFKIEVETFCKHFS 529
           L +   K +Q T+       W +ENVE ++ +C   ++   C   SS+ +      +   
Sbjct: 213 LSVRSEKQIQRTSYSPGERYWAYENVETSQSVCILIVLQFACILMSSYGVNYIRSKESMM 272

Query: 530 IQEKLDKIEEFYIXTT 577
            +E    +  F+   T
Sbjct: 273 SEEDFHTLAPFFAGVT 288


>Z82053-11|CAB04839.2|  335|Caenorhabditis elegans Hypothetical
           protein T26E3.9 protein.
          Length = 335

 Score = 27.5 bits (58), Expect = 7.4
 Identities = 16/76 (21%), Positives = 31/76 (40%), Gaps = 5/76 (6%)
 Frame = +2

Query: 365 LHINLRKSLQNTTSK-----WIFENVECAEHICPKELIDVCCSPNSSFKIEVETFCKHFS 529
           L +   K +Q T+       W +ENVE ++ +C   ++   C   SS+ +      +   
Sbjct: 213 LSVRSEKQIQRTSYSPGERYWAYENVETSQSVCILIVLQFACILMSSYGVNYIRSKESMM 272

Query: 530 IQEKLDKIEEFYIXTT 577
            +E    +  F+   T
Sbjct: 273 SEEDFHTLAPFFAGVT 288


>AF077544-4|ABD94098.1|  348|Caenorhabditis elegans Hypothetical
           protein H22K11.4b protein.
          Length = 348

 Score = 27.5 bits (58), Expect = 7.4
 Identities = 12/26 (46%), Positives = 17/26 (65%)
 Frame = -3

Query: 255 YGFSKHGFSMNLMGILNKDKILLISA 178
           YG+S+HGFS+ L  I+    IL + A
Sbjct: 180 YGYSEHGFSIVLFAIILGVSILFVFA 205


>AF077544-3|AAK39242.3|  458|Caenorhabditis elegans Hypothetical
           protein H22K11.4a protein.
          Length = 458

 Score = 27.5 bits (58), Expect = 7.4
 Identities = 12/26 (46%), Positives = 17/26 (65%)
 Frame = -3

Query: 255 YGFSKHGFSMNLMGILNKDKILLISA 178
           YG+S+HGFS+ L  I+    IL + A
Sbjct: 290 YGYSEHGFSIVLFAIILGVSILFVFA 315


>Z83731-9|CAH10802.1| 1364|Caenorhabditis elegans Hypothetical protein
            F16A11.3b protein.
          Length = 1364

 Score = 27.1 bits (57), Expect = 9.7
 Identities = 12/30 (40%), Positives = 15/30 (50%)
 Frame = +3

Query: 195  FCPYSKYPSNSLRNRVWRSRIGL*SSLQRI 284
            F P    P N  +N  WRSR  L S L ++
Sbjct: 948  FFPIGAQPGNQAQNGDWRSRFELISQLSKL 977


>Z83731-8|CAH10801.1| 1490|Caenorhabditis elegans Hypothetical protein
            F16A11.3a protein.
          Length = 1490

 Score = 27.1 bits (57), Expect = 9.7
 Identities = 12/30 (40%), Positives = 15/30 (50%)
 Frame = +3

Query: 195  FCPYSKYPSNSLRNRVWRSRIGL*SSLQRI 284
            F P    P N  +N  WRSR  L S L ++
Sbjct: 1074 FFPIGAQPGNQAQNGDWRSRFELISQLSKL 1103


>Z81505-5|CAH10795.1| 1364|Caenorhabditis elegans Hypothetical protein
            F16A11.3b protein.
          Length = 1364

 Score = 27.1 bits (57), Expect = 9.7
 Identities = 12/30 (40%), Positives = 15/30 (50%)
 Frame = +3

Query: 195  FCPYSKYPSNSLRNRVWRSRIGL*SSLQRI 284
            F P    P N  +N  WRSR  L S L ++
Sbjct: 948  FFPIGAQPGNQAQNGDWRSRFELISQLSKL 977


>Z81505-4|CAH10794.1| 1490|Caenorhabditis elegans Hypothetical protein
            F16A11.3a protein.
          Length = 1490

 Score = 27.1 bits (57), Expect = 9.7
 Identities = 12/30 (40%), Positives = 15/30 (50%)
 Frame = +3

Query: 195  FCPYSKYPSNSLRNRVWRSRIGL*SSLQRI 284
            F P    P N  +N  WRSR  L S L ++
Sbjct: 1074 FFPIGAQPGNQAQNGDWRSRFELISQLSKL 1103


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,312,668
Number of Sequences: 27780
Number of extensions: 284546
Number of successful extensions: 732
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 716
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 732
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1215936170
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)