Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte18m09
         (567 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE013599-2229|AAF58033.1|  665|Drosophila melanogaster CG7779-PA...    30   2.5  
X89601-1|CAA61760.1|  665|Drosophila melanogaster CNG channel pr...    29   3.3  
AE014298-2787|AAF48900.2| 2030|Drosophila melanogaster CG32542-P...    29   5.8  
AE014134-1936|AAF52995.1|  413|Drosophila melanogaster CG17116-P...    28   7.7  

>AE013599-2229|AAF58033.1|  665|Drosophila melanogaster CG7779-PA
           protein.
          Length = 665

 Score = 29.9 bits (64), Expect = 2.5
 Identities = 12/31 (38%), Positives = 16/31 (51%)
 Frame = -2

Query: 263 KQPSASRTRRKPPEWFLAILKRSTPTPSLSK 171
           +Q    R R KPP+WFL     +T T  + K
Sbjct: 44  RQRLTKRNRPKPPDWFLEKFSNTTNTDKIGK 74


>X89601-1|CAA61760.1|  665|Drosophila melanogaster CNG channel
           protein.
          Length = 665

 Score = 29.5 bits (63), Expect = 3.3
 Identities = 12/31 (38%), Positives = 16/31 (51%)
 Frame = -2

Query: 263 KQPSASRTRRKPPEWFLAILKRSTPTPSLSK 171
           +Q    R R KPP+WFL     +T T  + K
Sbjct: 44  RQRLTKRNRPKPPDWFLEKFSNTTNTDKIRK 74


>AE014298-2787|AAF48900.2| 2030|Drosophila melanogaster CG32542-PA
           protein.
          Length = 2030

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 11/20 (55%), Positives = 13/20 (65%)
 Frame = -2

Query: 365 NSAKACASVVKNCTHRAHCP 306
           +SA  C+ VV  C HR HCP
Sbjct: 138 SSAYWCSHVVAVCLHRIHCP 157


>AE014134-1936|AAF52995.1|  413|Drosophila melanogaster CG17116-PA
           protein.
          Length = 413

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 14/48 (29%), Positives = 23/48 (47%), Gaps = 2/48 (4%)
 Frame = +1

Query: 355 LAEFQVSLCVCFNG--SHPTPPALPQHWIQTQTIYKQRVNSVLHHITT 492
           +   +V L VC  G  +H +PP     W     +  Q V+  +H++TT
Sbjct: 7   IGAIKVMLIVCAIGRNAHSSPPESRYKWTTMDWLEAQNVSHEVHNVTT 54


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,881,247
Number of Sequences: 53049
Number of extensions: 552633
Number of successful extensions: 1361
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1315
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1361
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2213979693
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)