Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte18m07
         (594 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF025460-7|AAF02170.1|  119|Caenorhabditis elegans Hypothetical ...    87   7e-18
U80031-6|AAB37618.2|  491|Caenorhabditis elegans Hypothetical pr...    32   0.35 
AJ582073-1|CAE46543.1|  518|Caenorhabditis elegans flavin monoox...    30   1.1  
AF040646-1|AAK31537.1|  530|Caenorhabditis elegans Collagen prot...    30   1.1  
AC006663-1|AAF39901.1|  518|Caenorhabditis elegans Flavin-contai...    30   1.1  
AC024810-19|AAF60770.1|  427|Caenorhabditis elegans Hypothetical...    29   2.5  
AF077530-2|AAC26265.1|  436|Caenorhabditis elegans Hypothetical ...    29   3.3  
Z70268-6|CAA94221.2| 1243|Caenorhabditis elegans Hypothetical pr...    28   4.4  
Z70265-4|CAA94203.2| 1243|Caenorhabditis elegans Hypothetical pr...    28   4.4  
Z79695-2|CAB01971.2| 1008|Caenorhabditis elegans Hypothetical pr...    28   5.8  
Z72515-4|CAA96685.1|  288|Caenorhabditis elegans Hypothetical pr...    27   7.6  
AL021479-4|CAA16319.1|  301|Caenorhabditis elegans Hypothetical ...    27   7.6  
AF016657-4|AAB93651.2|  296|Caenorhabditis elegans Hypothetical ...    27   7.6  

>AF025460-7|AAF02170.1|  119|Caenorhabditis elegans Hypothetical
           protein F53A3.7 protein.
          Length = 119

 Score = 87.4 bits (207), Expect = 7e-18
 Identities = 44/98 (44%), Positives = 60/98 (61%), Gaps = 1/98 (1%)
 Frame = +1

Query: 262 QSPRLFSTTTTKLNEVLSAEQKKTEGKFQLMFTCKKCNTRNS-KIITKLAYYKGVVIVIC 438
           ++ R FS T  +L+     +Q   E +  L +TCK CN+R   K   K +Y KGVVIV C
Sbjct: 11  RASRSFSETVPRLSATPLGKQ---EPQLSLSYTCKVCNSREGPKTFAKSSYEKGVVIVTC 67

Query: 439 HGCENKHLIADNLNWFSDMEGKKNIEDIMAEKGETVQK 552
            GC N H+IADN+ WF D +G KNIED +  +GE V++
Sbjct: 68  SGCHNHHIIADNIGWFEDFKG-KNIEDHLKTRGEAVKR 104


>U80031-6|AAB37618.2|  491|Caenorhabditis elegans Hypothetical
           protein B0554.7 protein.
          Length = 491

 Score = 31.9 bits (69), Expect = 0.35
 Identities = 13/33 (39%), Positives = 21/33 (63%)
 Frame = -1

Query: 456 FIFASVTYHYNNTLVICQFRNNFTISCVTFLTS 358
           F+F +  YHY +T+V+   +  F + C T+LTS
Sbjct: 99  FLFINSYYHYFSTVVLGVGKAFFNLGCTTYLTS 131


>AJ582073-1|CAE46543.1|  518|Caenorhabditis elegans flavin
           monooxygenase protein.
          Length = 518

 Score = 30.3 bits (65), Expect = 1.1
 Identities = 15/55 (27%), Positives = 30/55 (54%)
 Frame = -2

Query: 200 ELPLLGK*TMLLSKRGLWNFTTKSIKVLVVILIFPFKLKVKIITSFTILLLKCNY 36
           EL  +GK   L+++RG W F+  S +   V L+F  K +++++      ++  N+
Sbjct: 204 ELSRIGKQVYLVTRRGSWIFSRLSDRGEPVDLVFNTKFQMQLVDMIPSSIMNWNF 258


>AF040646-1|AAK31537.1|  530|Caenorhabditis elegans Collagen protein
           70 protein.
          Length = 530

 Score = 30.3 bits (65), Expect = 1.1
 Identities = 12/22 (54%), Positives = 17/22 (77%)
 Frame = +1

Query: 226 SAAPLSTSTPKIQSPRLFSTTT 291
           + AP +T+TP  Q+PR +STTT
Sbjct: 316 ATAPPATATPATQTPRTYSTTT 337


>AC006663-1|AAF39901.1|  518|Caenorhabditis elegans
           Flavin-containing monooxygenasefamily protein 5 protein.
          Length = 518

 Score = 30.3 bits (65), Expect = 1.1
 Identities = 15/55 (27%), Positives = 30/55 (54%)
 Frame = -2

Query: 200 ELPLLGK*TMLLSKRGLWNFTTKSIKVLVVILIFPFKLKVKIITSFTILLLKCNY 36
           EL  +GK   L+++RG W F+  S +   V L+F  K +++++      ++  N+
Sbjct: 204 ELSRIGKQVYLVTRRGSWIFSRLSDRGEPVDLVFNTKFQMQLVDMIPSSIMNWNF 258


>AC024810-19|AAF60770.1|  427|Caenorhabditis elegans Hypothetical
           protein Y54E10A.16a protein.
          Length = 427

 Score = 29.1 bits (62), Expect = 2.5
 Identities = 16/45 (35%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
 Frame = +1

Query: 352 MFTCKKCNTRNSK-IITKLAYYKGVVIVICHGCENKHLIADNLNW 483
           ++ C+ C  R  K IITK++ Y+G  +       NK  I   LNW
Sbjct: 174 VWRCRSCRKRREKRIITKISVYEGTFLFYSRMPLNKFFIF-MLNW 217


>AF077530-2|AAC26265.1|  436|Caenorhabditis elegans Hypothetical
           protein C40D2.2 protein.
          Length = 436

 Score = 28.7 bits (61), Expect = 3.3
 Identities = 15/44 (34%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
 Frame = +1

Query: 274 LFSTTTTKLNEVLSAEQKKTEGKFQLMFTCKK--CNTRNSKIIT 399
           +FS T T+ N +   + +K +G F+L   C K  C +R   I T
Sbjct: 296 IFSDTQTRFNILWKLKIRKQDGFFELFLLCDKQLCKSRKWSIET 339


>Z70268-6|CAA94221.2| 1243|Caenorhabditis elegans Hypothetical
           protein T21E8.3 protein.
          Length = 1243

 Score = 28.3 bits (60), Expect = 4.4
 Identities = 15/60 (25%), Positives = 27/60 (45%)
 Frame = -1

Query: 531 FSHDVFNVFFTFHIRKPIKVICYQMFIFASVTYHYNNTLVICQFRNNFTISCVTFLTSKH 352
           + H    +F    + +PI + C Q F F  V+   +  L I  F++  ++ C  +   KH
Sbjct: 719 YGHFWAAMFLVLGVIRPITLYC-QFFFFGKVSEKLSTRLRIKSFQHLLSLPCAFYDDPKH 777


>Z70265-4|CAA94203.2| 1243|Caenorhabditis elegans Hypothetical
           protein T21E8.3 protein.
          Length = 1243

 Score = 28.3 bits (60), Expect = 4.4
 Identities = 15/60 (25%), Positives = 27/60 (45%)
 Frame = -1

Query: 531 FSHDVFNVFFTFHIRKPIKVICYQMFIFASVTYHYNNTLVICQFRNNFTISCVTFLTSKH 352
           + H    +F    + +PI + C Q F F  V+   +  L I  F++  ++ C  +   KH
Sbjct: 719 YGHFWAAMFLVLGVIRPITLYC-QFFFFGKVSEKLSTRLRIKSFQHLLSLPCAFYDDPKH 777


>Z79695-2|CAB01971.2| 1008|Caenorhabditis elegans Hypothetical
           protein F27D4.6 protein.
          Length = 1008

 Score = 27.9 bits (59), Expect = 5.8
 Identities = 13/28 (46%), Positives = 17/28 (60%)
 Frame = -2

Query: 104 IFPFKLKVKIITSFTILLLKCNYLSCSK 21
           + P K +VKI T FT + L C+YL   K
Sbjct: 91  VTPLKDRVKIRTKFTTIPLLCSYLKEDK 118


>Z72515-4|CAA96685.1|  288|Caenorhabditis elegans Hypothetical
           protein T11A5.5 protein.
          Length = 288

 Score = 27.5 bits (58), Expect = 7.6
 Identities = 14/43 (32%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
 Frame = +1

Query: 202 FFGRRLIISAAP-LSTSTPKIQSPRLFSTTTTKLNEVLSAEQK 327
           FFG + ++  AP  ST   K+ S    +TTTT +     +E++
Sbjct: 143 FFGSKCLLKKAPSTSTIASKMTSTTTMTTTTTTITTSTESEKQ 185


>AL021479-4|CAA16319.1|  301|Caenorhabditis elegans Hypothetical
           protein Y22F5A.6 protein.
          Length = 301

 Score = 27.5 bits (58), Expect = 7.6
 Identities = 13/43 (30%), Positives = 24/43 (55%)
 Frame = +3

Query: 153 TTFTQQHCLFP*QWQFILRKAFNNIGGSPINFNSKNTVSEAFQ 281
           TT +   CL    ++ +  +A N IG +  + N+ NT++ AF+
Sbjct: 74  TTPSDMDCLRDQGYKSVFVRALNPIGNTYFDRNALNTINNAFE 116


>AF016657-4|AAB93651.2|  296|Caenorhabditis elegans Hypothetical
           protein C16C4.5 protein.
          Length = 296

 Score = 27.5 bits (58), Expect = 7.6
 Identities = 13/38 (34%), Positives = 18/38 (47%)
 Frame = +1

Query: 277 FSTTTTKLNEVLSAEQKKTEGKFQLMFTCKKCNTRNSK 390
           F+ T  + N     E KK +G F+L   C+K    N K
Sbjct: 27  FTDTEERFNIPWRIEIKKKDGNFELFLKCQKEECENRK 64


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,404,988
Number of Sequences: 27780
Number of extensions: 256159
Number of successful extensions: 791
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 768
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 789
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1258229602
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)