Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte18m05
         (630 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT011198-1|AAR88560.1|  180|Drosophila melanogaster GH10931p pro...    30   2.2  
AE014134-1320|AAS64652.1|  522|Drosophila melanogaster CG33296-P...    29   5.2  

>BT011198-1|AAR88560.1|  180|Drosophila melanogaster GH10931p
           protein.
          Length = 180

 Score = 30.3 bits (65), Expect = 2.2
 Identities = 14/40 (35%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
 Frame = -2

Query: 176 RHTDADPDNNKKKLKTQ-CFCILFKKHTSLKIHRQNLKAR 60
           R   A P+N +K+L+   C CI +     LK HR+  K +
Sbjct: 141 RKKKATPENTEKELRVSGCICIPYMNINDLKSHRKKKKKK 180


>AE014134-1320|AAS64652.1|  522|Drosophila melanogaster CG33296-PA
           protein.
          Length = 522

 Score = 29.1 bits (62), Expect = 5.2
 Identities = 18/43 (41%), Positives = 26/43 (60%)
 Frame = -1

Query: 597 LFNFIYFILVSLNSLNASQIFQVVLVYTF*LSNKLYLKSQKVT 469
           L+ FIY+ ++ L SL A+Q+F  VL   F    KL  + Q+VT
Sbjct: 302 LWTFIYYSMLLLASLTATQLF-TVLQSLFDEFEKLKERKQEVT 343


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,171,646
Number of Sequences: 53049
Number of extensions: 461373
Number of successful extensions: 895
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 872
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 895
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2621070450
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)