Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte18m04
         (657 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_05_1076 + 30180923-30181150,30181746-30181913,30182063-301822...   105   4e-23
09_04_0150 - 15150169-15150228,15150294-15150529,15151844-151520...   101   4e-22
01_07_0293 - 42567564-42567751,42567905-42567994,42569028-425691...    32   0.35 
02_02_0712 + 13200174-13200761,13201966-13202616                       29   4.3  

>03_05_1076 +
           30180923-30181150,30181746-30181913,30182063-30182281,
           30182827-30182872,30183708-30183943,30184065-30184079,
           30185749-30186061,30186189-30186403,30186598-30186600
          Length = 480

 Score =  105 bits (251), Expect = 4e-23
 Identities = 45/64 (70%), Positives = 52/64 (81%)
 Frame = +2

Query: 338 TGVXXXXXXXXKHHICNANLMRNGADYAVYVNTASEFDGSDAGARPDEAVSWGKIRPNAN 517
           TG+        KHHICNAN+ RNGADYAVY+NTA EFDGSD+GA+PDEAVSWGKI+ +A 
Sbjct: 237 TGIIVLGGGLPKHHICNANMFRNGADYAVYINTAQEFDGSDSGAQPDEAVSWGKIKGSAK 296

Query: 518 PVKL 529
           PVKL
Sbjct: 297 PVKL 300



 Score = 60.9 bits (141), Expect = 9e-10
 Identities = 24/34 (70%), Positives = 27/34 (79%)
 Frame = +2

Query: 2   NRIGNLLVPNDNYCLFEEWVTPLLDEMISEQMKE 103
           NRIGNLLVPNDNYC FE W+ PL D+M+ EQ  E
Sbjct: 172 NRIGNLLVPNDNYCKFENWIMPLFDQMLQEQSTE 205


>09_04_0150 -
           15150169-15150228,15150294-15150529,15151844-15152063,
           15152218-15152385,15152969-15153214
          Length = 309

 Score =  101 bits (243), Expect = 4e-22
 Identities = 43/63 (68%), Positives = 51/63 (80%)
 Frame = +2

Query: 338 TGVXXXXXXXXKHHICNANLMRNGADYAVYVNTASEFDGSDAGARPDEAVSWGKIRPNAN 517
           TG+        KHHICNAN+ RNGAD+AVY+NTA EFDGSD+GA+PDEAVSWGKI+ +A 
Sbjct: 228 TGIIVLGGGLPKHHICNANMFRNGADFAVYINTAQEFDGSDSGAQPDEAVSWGKIKGSAK 287

Query: 518 PVK 526
           PVK
Sbjct: 288 PVK 290



 Score = 48.8 bits (111), Expect = 4e-06
 Identities = 18/23 (78%), Positives = 20/23 (86%)
 Frame = +2

Query: 2   NRIGNLLVPNDNYCLFEEWVTPL 70
           NRIGNLLVPNDNYC FE W+ P+
Sbjct: 178 NRIGNLLVPNDNYCKFENWIMPI 200


>01_07_0293 -
           42567564-42567751,42567905-42567994,42569028-42569195,
           42569284-42569562,42569673-42569739
          Length = 263

 Score = 32.3 bits (70), Expect = 0.35
 Identities = 23/63 (36%), Positives = 33/63 (52%), Gaps = 4/63 (6%)
 Frame = -3

Query: 349 YDSSVVGFDGHGVQSAQVSQYVYDQSGTLKRV-EVHHVA*GSISQCGTKY---RYVVPPS 182
           YD SV+  D  G+++    Q   DQSG+  RV E  H +  +  Q GT++    Y  PPS
Sbjct: 75  YDKSVLYSDQCGLENDMDEQESNDQSGSKGRVDEQKHKSNAAAKQYGTRHVLVLYDFPPS 134

Query: 181 PIA 173
            +A
Sbjct: 135 TLA 137


>02_02_0712 + 13200174-13200761,13201966-13202616
          Length = 412

 Score = 28.7 bits (61), Expect = 4.3
 Identities = 19/52 (36%), Positives = 25/52 (48%), Gaps = 8/52 (15%)
 Frame = +2

Query: 416 YAVYVNTASEFDGSDAGAR--------PDEAVSWGKIRPNANPVKLYADATL 547
           Y+VYV+T   F+GSD G          P + V WG+I       +L A A L
Sbjct: 167 YSVYVHTDPAFNGSDPGEASVFYRRTIPSKEVKWGEISMVEAERRLLAHALL 218


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,104,022
Number of Sequences: 37544
Number of extensions: 385503
Number of successful extensions: 837
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 816
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 837
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1644004708
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)