Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte18m04
(657 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ855482-1|ABH88169.1| 116|Apis mellifera chemosensory protein ... 24 1.1
AJ973399-1|CAJ01446.1| 116|Apis mellifera hypothetical protein ... 24 1.1
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 23 1.9
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 23 1.9
DQ288392-1|ABC41342.1| 120|Apis mellifera nanos protein. 22 5.9
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 22 5.9
DQ435326-1|ABD92641.1| 132|Apis mellifera OBP9 protein. 21 7.8
DQ257631-1|ABB82366.1| 424|Apis mellifera yellow e3-like protei... 21 7.8
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 21 7.8
AY463910-1|AAR24352.1| 843|Apis mellifera metabotropic glutamat... 21 7.8
AF004842-1|AAD01205.1| 598|Apis mellifera major royal jelly pro... 21 7.8
AB161181-1|BAD08343.1| 933|Apis mellifera metabotropic glutamat... 21 7.8
>DQ855482-1|ABH88169.1| 116|Apis mellifera chemosensory protein 1
protein.
Length = 116
Score = 24.2 bits (50), Expect = 1.1
Identities = 10/36 (27%), Positives = 18/36 (50%)
Frame = -3
Query: 514 RIRSDFAPRDCFVGPGTCITAVKFTGRVHVHSVIST 407
R+R+ + DCF+ G+C+T + H+ T
Sbjct: 40 RLRNQYY--DCFIDAGSCLTPDSVFFKSHITEAFQT 73
>AJ973399-1|CAJ01446.1| 116|Apis mellifera hypothetical protein
protein.
Length = 116
Score = 24.2 bits (50), Expect = 1.1
Identities = 10/36 (27%), Positives = 18/36 (50%)
Frame = -3
Query: 514 RIRSDFAPRDCFVGPGTCITAVKFTGRVHVHSVIST 407
R+R+ + DCF+ G+C+T + H+ T
Sbjct: 40 RLRNQYY--DCFIDAGSCLTPDSVFFKSHITEAFQT 73
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 23.4 bits (48), Expect = 1.9
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = +2
Query: 512 ANPVKLYADATLVFPLIVA 568
A+ V YAD ++ PLIVA
Sbjct: 1602 ASTVPFYADVKVMLPLIVA 1620
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 23.4 bits (48), Expect = 1.9
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = +2
Query: 512 ANPVKLYADATLVFPLIVA 568
A+ V YAD ++ PLIVA
Sbjct: 1598 ASTVPFYADVKVMLPLIVA 1616
>DQ288392-1|ABC41342.1| 120|Apis mellifera nanos protein.
Length = 120
Score = 21.8 bits (44), Expect = 5.9
Identities = 9/23 (39%), Positives = 11/23 (47%)
Frame = -2
Query: 71 TME*PTPQTNNNYHLAPTNCLSC 3
TM TP+ N PT C+ C
Sbjct: 21 TMPETTPRRKKNKKPLPTECVFC 43
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 21.8 bits (44), Expect = 5.9
Identities = 8/21 (38%), Positives = 13/21 (61%)
Frame = +1
Query: 304 QIEHHGRQSQQHWSHNIRWGF 366
Q +HH S +H S+ R+G+
Sbjct: 103 QQQHHQDSSSEHASNQERFGY 123
>DQ435326-1|ABD92641.1| 132|Apis mellifera OBP9 protein.
Length = 132
Score = 21.4 bits (43), Expect = 7.8
Identities = 7/17 (41%), Positives = 11/17 (64%)
Frame = +1
Query: 496 QNQT*CESSEAICRCYV 546
QN+ CE + + +CYV
Sbjct: 103 QNEDPCEKAYQLVKCYV 119
>DQ257631-1|ABB82366.1| 424|Apis mellifera yellow e3-like protein
protein.
Length = 424
Score = 21.4 bits (43), Expect = 7.8
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = +1
Query: 514 ESSEAICRCYVSVPLDRSS 570
E+SEA R +V ++RSS
Sbjct: 289 ENSEAAARSFVPFSIERSS 307
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 21.4 bits (43), Expect = 7.8
Identities = 9/33 (27%), Positives = 13/33 (39%)
Frame = -2
Query: 494 PTRLLRRAWHLHHCRQIHWPCSRTQRNQHHYAS 396
PT L + + +H P + R HH S
Sbjct: 384 PTSLTKSKMEVMELSDLHHPNCKINRKVHHTTS 416
>AY463910-1|AAR24352.1| 843|Apis mellifera metabotropic glutamate
receptor 1 protein.
Length = 843
Score = 21.4 bits (43), Expect = 7.8
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = +2
Query: 194 NIPIFSPALTDGSLGDMMYFHSFKR 268
+IP SPA T +L D F F R
Sbjct: 93 HIPQISPASTAKALSDKTRFDYFAR 117
>AF004842-1|AAD01205.1| 598|Apis mellifera major royal jelly
protein MRJP5 protein.
Length = 598
Score = 21.4 bits (43), Expect = 7.8
Identities = 12/41 (29%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Frame = -1
Query: 297 SPNMSMISPGRLNEWKYIMSPKDPSVNAGL-NIGMLFLQAQ 178
SP + + ++ K ++ P D +VNA N G++ L Q
Sbjct: 155 SPKLHVFDLNTSHQLKQVVMPHDIAVNASTGNGGLVSLVVQ 195
>AB161181-1|BAD08343.1| 933|Apis mellifera metabotropic glutamate
receptor protein.
Length = 933
Score = 21.4 bits (43), Expect = 7.8
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = +2
Query: 194 NIPIFSPALTDGSLGDMMYFHSFKR 268
+IP SPA T +L D F F R
Sbjct: 183 HIPQISPASTAKALSDKTRFDYFAR 207
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 186,296
Number of Sequences: 438
Number of extensions: 4126
Number of successful extensions: 35
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 35
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 19734030
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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