Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte18l23
         (619 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ494419-1|ABF55370.1|  127|Apis mellifera telomerase reverse tr...    23   2.4  
DQ494418-1|ABF55369.1|  110|Apis mellifera telomerase reverse tr...    23   2.4  
EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase p...    23   3.2  
EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          22   4.2  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      22   4.2  
AF134821-1|AAD40236.1|  226|Apis mellifera hexamerin protein.          22   4.2  
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    21   7.3  

>DQ494419-1|ABF55370.1|  127|Apis mellifera telomerase reverse
           transcriptase protein.
          Length = 127

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 11/46 (23%), Positives = 24/46 (52%)
 Frame = -1

Query: 484 LQLCKNSCMISYTRKRLLRSNI*FHIHKFM*KCTKLITKTHFVITR 347
           +++ K  C++   R  +L  ++  ++H  +    K+I  T+  ITR
Sbjct: 30  MRILKEVCVLQANRACILIKDLFDNVHNHIQNIFKIIKSTNEKITR 75


>DQ494418-1|ABF55369.1|  110|Apis mellifera telomerase reverse
           transcriptase protein.
          Length = 110

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 11/46 (23%), Positives = 24/46 (52%)
 Frame = -1

Query: 484 LQLCKNSCMISYTRKRLLRSNI*FHIHKFM*KCTKLITKTHFVITR 347
           +++ K  C++   R  +L  ++  ++H  +    K+I  T+  ITR
Sbjct: 13  MRILKEVCVLQANRACILIKDLFDNVHNHIQNIFKIIKSTNEKITR 58


>EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase
           protein.
          Length = 620

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 8/23 (34%), Positives = 14/23 (60%)
 Frame = -3

Query: 191 DKNILRHYQEVQTLTRHFSKEHH 123
           DKN  RHY + ++  +++S   H
Sbjct: 570 DKNQCRHYLDAKSSVQNYSLAKH 592


>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 11/41 (26%), Positives = 19/41 (46%)
 Frame = +2

Query: 431 EQPLPGVGDHATVLTQLETSAEEIHSALNRIIDHQTHHRLR 553
           E   PGV   +  + +L T  +   S LN  +  Q+H + +
Sbjct: 442 ELNFPGVSIESVTVDKLITYFDHFESMLNNGVSIQSHAKAK 482


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 11/41 (26%), Positives = 19/41 (46%)
 Frame = +2

Query: 431 EQPLPGVGDHATVLTQLETSAEEIHSALNRIIDHQTHHRLR 553
           E   PGV   +  + +L T  +   S LN  +  Q+H + +
Sbjct: 442 ELNFPGVSIESVTVDKLITYFDHFESMLNNGVSIQSHAKAK 482


>AF134821-1|AAD40236.1|  226|Apis mellifera hexamerin protein.
          Length = 226

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 11/41 (26%), Positives = 19/41 (46%)
 Frame = +2

Query: 431 EQPLPGVGDHATVLTQLETSAEEIHSALNRIIDHQTHHRLR 553
           E   PGV   +  + +L T  +   S LN  +  Q+H + +
Sbjct: 68  ELNFPGVSIESVTVDKLITYFDHFESMLNNGVSIQSHAKAK 108


>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 11/39 (28%), Positives = 19/39 (48%)
 Frame = +2

Query: 440 LPGVGDHATVLTQLETSAEEIHSALNRIIDHQTHHRLRE 556
           LPGV      ++QL T   + +  L+ +  HQ+  +  E
Sbjct: 462 LPGVTIQNVDVSQLVTLFTDFYVDLDAVTGHQSQQQQEE 500


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 168,225
Number of Sequences: 438
Number of extensions: 3511
Number of successful extensions: 13
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18337950
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)