Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte18l22
(616 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC032841-1|AAH32841.1| 419|Homo sapiens leucine rich repeat con... 40 0.005
BC040339-1|AAH40339.1| 953|Homo sapiens NOD1 protein protein. 32 1.4
AF149774-1|AAD43922.1| 953|Homo sapiens NOD1 protein protein. 32 1.4
AF126484-1|AAD29125.1| 953|Homo sapiens CARD4 protein. 32 1.4
AF113925-1|AAD28350.1| 953|Homo sapiens Nod1 protein. 32 1.4
AC006027-1|AAS46897.1| 953|Homo sapiens unknown protein. 32 1.4
BC121160-1|AAI21161.1| 462|Homo sapiens chromosome 14 open read... 31 4.3
BC121159-1|AAI21160.1| 462|Homo sapiens chromosome 14 open read... 31 4.3
AF111169-4|AAD44364.1| 608|Homo sapiens unknown protein. 31 4.3
>BC032841-1|AAH32841.1| 419|Homo sapiens leucine rich repeat
containing 34 protein.
Length = 419
Score = 40.3 bits (90), Expect = 0.005
Identities = 30/107 (28%), Positives = 50/107 (46%), Gaps = 1/107 (0%)
Frame = +1
Query: 298 RITDFDICAICRYIRELKLRVTKIDLCYNKITDXXXXXXXXXXXXXXXXXXXDLNIMNNE 477
R+T D + + ++ L + +D+ YN + D LN+M N+
Sbjct: 93 RVTGEDFWILSKILKNC-LYINGLDVGYNLLCDVGAYYAAKLLQKQLNLIY--LNLMFND 149
Query: 478 LTDKSVLHLSKYAQFIK-LKYLRLNGNDIGTKGGEYFADFLENNTSL 615
+ + ++K + LKYLR+ GN I KGG +FA L+ N+SL
Sbjct: 150 IGPEGGELIAKVLHKNRTLKYLRMTGNKIENKGGMFFAAMLQINSSL 196
>BC040339-1|AAH40339.1| 953|Homo sapiens NOD1 protein protein.
Length = 953
Score = 32.3 bits (70), Expect = 1.4
Identities = 29/110 (26%), Positives = 47/110 (42%), Gaps = 1/110 (0%)
Frame = +1
Query: 289 YNRRITDFDICAICRYIRELKLRVTKIDLCYNKITDXXXXXXXXXXXXXXXXXXXDLNIM 468
YN +ITD + + + E K +T + L NKIT ++ +
Sbjct: 764 YNNQITDVGARYVTKILDECK-GLTHLKLGKNKITSEGGKYLALAVKNSKSIS--EVGMW 820
Query: 469 NNELTDKSVLHLSKYAQ-FIKLKYLRLNGNDIGTKGGEYFADFLENNTSL 615
N++ D+ ++ + L L L N I T+GG+ A L+ NTSL
Sbjct: 821 GNQVGDEGAKAFAEALRNHPSLTTLSLASNGISTEGGKSLARALQQNTSL 870
>AF149774-1|AAD43922.1| 953|Homo sapiens NOD1 protein protein.
Length = 953
Score = 32.3 bits (70), Expect = 1.4
Identities = 29/110 (26%), Positives = 47/110 (42%), Gaps = 1/110 (0%)
Frame = +1
Query: 289 YNRRITDFDICAICRYIRELKLRVTKIDLCYNKITDXXXXXXXXXXXXXXXXXXXDLNIM 468
YN +ITD + + + E K +T + L NKIT ++ +
Sbjct: 764 YNNQITDVGARYVTKILDECK-GLTHLKLGKNKITSEGGKYLALAVKNSKSIS--EVGMW 820
Query: 469 NNELTDKSVLHLSKYAQ-FIKLKYLRLNGNDIGTKGGEYFADFLENNTSL 615
N++ D+ ++ + L L L N I T+GG+ A L+ NTSL
Sbjct: 821 GNQVGDEGAKAFAEALRNHPSLTTLSLASNGISTEGGKSLARALQQNTSL 870
>AF126484-1|AAD29125.1| 953|Homo sapiens CARD4 protein.
Length = 953
Score = 32.3 bits (70), Expect = 1.4
Identities = 29/110 (26%), Positives = 47/110 (42%), Gaps = 1/110 (0%)
Frame = +1
Query: 289 YNRRITDFDICAICRYIRELKLRVTKIDLCYNKITDXXXXXXXXXXXXXXXXXXXDLNIM 468
YN +ITD + + + E K +T + L NKIT ++ +
Sbjct: 764 YNNQITDVGARYVTKILDECK-GLTHLKLGKNKITSEGGKYLALAVKNSKSIS--EVGMW 820
Query: 469 NNELTDKSVLHLSKYAQ-FIKLKYLRLNGNDIGTKGGEYFADFLENNTSL 615
N++ D+ ++ + L L L N I T+GG+ A L+ NTSL
Sbjct: 821 GNQVGDEGAKAFAEALRNHPSLTTLSLASNGISTEGGKSLARALQQNTSL 870
>AF113925-1|AAD28350.1| 953|Homo sapiens Nod1 protein.
Length = 953
Score = 32.3 bits (70), Expect = 1.4
Identities = 29/110 (26%), Positives = 47/110 (42%), Gaps = 1/110 (0%)
Frame = +1
Query: 289 YNRRITDFDICAICRYIRELKLRVTKIDLCYNKITDXXXXXXXXXXXXXXXXXXXDLNIM 468
YN +ITD + + + E K +T + L NKIT ++ +
Sbjct: 764 YNNQITDVGARYVTKILDECK-GLTHLKLGKNKITSEGGKYLALAVKNSKSIS--EVGMW 820
Query: 469 NNELTDKSVLHLSKYAQ-FIKLKYLRLNGNDIGTKGGEYFADFLENNTSL 615
N++ D+ ++ + L L L N I T+GG+ A L+ NTSL
Sbjct: 821 GNQVGDEGAKAFAEALRNHPSLTTLSLASNGISTEGGKSLARALQQNTSL 870
>AC006027-1|AAS46897.1| 953|Homo sapiens unknown protein.
Length = 953
Score = 32.3 bits (70), Expect = 1.4
Identities = 29/110 (26%), Positives = 47/110 (42%), Gaps = 1/110 (0%)
Frame = +1
Query: 289 YNRRITDFDICAICRYIRELKLRVTKIDLCYNKITDXXXXXXXXXXXXXXXXXXXDLNIM 468
YN +ITD + + + E K +T + L NKIT ++ +
Sbjct: 764 YNNQITDVGARYVTKILDECK-GLTHLKLGKNKITSEGGKYLALAVKNSKSIS--EVGMW 820
Query: 469 NNELTDKSVLHLSKYAQ-FIKLKYLRLNGNDIGTKGGEYFADFLENNTSL 615
N++ D+ ++ + L L L N I T+GG+ A L+ NTSL
Sbjct: 821 GNQVGDEGAKAFAEALRNHPSLTTLSLASNGISTEGGKSLARALQQNTSL 870
>BC121160-1|AAI21161.1| 462|Homo sapiens chromosome 14 open reading
frame 166B protein.
Length = 462
Score = 30.7 bits (66), Expect = 4.3
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = +1
Query: 529 LKYLRLNGNDIGTKGGEYFADFLENNTSL 615
L YL + GNDIG +G + LE+N SL
Sbjct: 278 LVYLDIGGNDIGNEGASKISKGLESNESL 306
>BC121159-1|AAI21160.1| 462|Homo sapiens chromosome 14 open reading
frame 166B protein.
Length = 462
Score = 30.7 bits (66), Expect = 4.3
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = +1
Query: 529 LKYLRLNGNDIGTKGGEYFADFLENNTSL 615
L YL + GNDIG +G + LE+N SL
Sbjct: 278 LVYLDIGGNDIGNEGASKISKGLESNESL 306
>AF111169-4|AAD44364.1| 608|Homo sapiens unknown protein.
Length = 608
Score = 30.7 bits (66), Expect = 4.3
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = +1
Query: 529 LKYLRLNGNDIGTKGGEYFADFLENNTSL 615
L YL + GNDIG +G + LE+N SL
Sbjct: 246 LVYLDIGGNDIGNEGASKISKGLESNESL 274
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 77,565,726
Number of Sequences: 237096
Number of extensions: 1458161
Number of successful extensions: 2637
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 2553
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2631
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6579110070
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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