Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte18l04
         (560 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ485319-1|ABF21078.1|  175|Apis mellifera icarapin variant 2 pr...    21   6.4  
DQ485318-1|ABF21077.1|  223|Apis mellifera icarapin variant 1 pr...    21   6.4  
AY939856-1|AAX33236.1|  223|Apis mellifera venom carbohydrate-ri...    21   6.4  
AY897570-1|AAW81036.1|  223|Apis mellifera venom protein 2 protein.    21   6.4  
AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protei...    21   6.4  
DQ667186-1|ABG75738.1|  447|Apis mellifera glutamate-gated chlor...    21   8.5  
DQ667185-1|ABG75737.1|  447|Apis mellifera glutamate-gated chlor...    21   8.5  

>DQ485319-1|ABF21078.1|  175|Apis mellifera icarapin variant 2
           precursor protein.
          Length = 175

 Score = 21.4 bits (43), Expect = 6.4
 Identities = 10/38 (26%), Positives = 19/38 (50%)
 Frame = +3

Query: 396 EAVVGNVGADADYPICLIPNLSNSGEGEGKNNYWPESV 509
           E ++  V ++AD  +  +P L    E   +++   ESV
Sbjct: 121 ETILTTVSSEADSDVTTLPTLIGKNETSTQSSRSVESV 158


>DQ485318-1|ABF21077.1|  223|Apis mellifera icarapin variant 1
           precursor protein.
          Length = 223

 Score = 21.4 bits (43), Expect = 6.4
 Identities = 10/38 (26%), Positives = 19/38 (50%)
 Frame = +3

Query: 396 EAVVGNVGADADYPICLIPNLSNSGEGEGKNNYWPESV 509
           E ++  V ++AD  +  +P L    E   +++   ESV
Sbjct: 169 ETILTTVSSEADSDVTTLPTLIGKNETSTQSSRSVESV 206


>AY939856-1|AAX33236.1|  223|Apis mellifera venom carbohydrate-rich
           protein precursor protein.
          Length = 223

 Score = 21.4 bits (43), Expect = 6.4
 Identities = 10/38 (26%), Positives = 19/38 (50%)
 Frame = +3

Query: 396 EAVVGNVGADADYPICLIPNLSNSGEGEGKNNYWPESV 509
           E ++  V ++AD  +  +P L    E   +++   ESV
Sbjct: 169 ETILTTVSSEADSDVTTLPTLIGKNETSTQSSRSVESV 206


>AY897570-1|AAW81036.1|  223|Apis mellifera venom protein 2 protein.
          Length = 223

 Score = 21.4 bits (43), Expect = 6.4
 Identities = 10/38 (26%), Positives = 19/38 (50%)
 Frame = +3

Query: 396 EAVVGNVGADADYPICLIPNLSNSGEGEGKNNYWPESV 509
           E ++  V ++AD  +  +P L    E   +++   ESV
Sbjct: 169 ETILTTVSSEADSDVTTLPTLIGKNETSTQSSRSVESV 206


>AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protein
           kinase foraging protein.
          Length = 678

 Score = 21.4 bits (43), Expect = 6.4
 Identities = 7/20 (35%), Positives = 11/20 (55%)
 Frame = +3

Query: 174 KFWIICGSSTAVPPKISTNQ 233
           K W  CG+   V P++  N+
Sbjct: 521 KTWTFCGTPEYVAPEVILNK 540


>DQ667186-1|ABG75738.1|  447|Apis mellifera glutamate-gated chloride
           channel protein.
          Length = 447

 Score = 21.0 bits (42), Expect = 8.5
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = +1

Query: 151 TKWCNNKTNFG 183
           T +CN+KTN G
Sbjct: 216 TDYCNSKTNTG 226


>DQ667185-1|ABG75737.1|  447|Apis mellifera glutamate-gated chloride
           channel protein.
          Length = 447

 Score = 21.0 bits (42), Expect = 8.5
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = +1

Query: 151 TKWCNNKTNFG 183
           T +CN+KTN G
Sbjct: 216 TDYCNSKTNTG 226


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 134,909
Number of Sequences: 438
Number of extensions: 2515
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 16195212
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)