Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte18k22
         (673 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_03_0099 - 9983044-9983052,9983145-9983939,9984031-9984301,998...    29   3.4  
06_03_0725 - 23894215-23894412,23894660-23894803,23895058-238951...    29   3.4  
12_01_0906 + 8799284-8799441,8800865-8801690,8801933-8802055,880...    28   5.9  
10_08_0765 - 20421813-20423174,20423591-20423771,20423862-204241...    28   5.9  
09_04_0321 - 16664316-16664939,16665369-16666262                       28   5.9  
01_05_0178 - 18971075-18971863,18971960-18972197,18972791-18973041     28   7.8  

>11_03_0099 -
           9983044-9983052,9983145-9983939,9984031-9984301,
           9984857-9985056
          Length = 424

 Score = 29.1 bits (62), Expect = 3.4
 Identities = 11/18 (61%), Positives = 14/18 (77%)
 Frame = -2

Query: 147 NNTNN*INGIFKKNHCFY 94
           NN N+ ING FKKN C++
Sbjct: 163 NNLNDSINGNFKKNDCYW 180


>06_03_0725 -
           23894215-23894412,23894660-23894803,23895058-23895126,
           23895197-23895267,23895357-23895444,23895522-23895707,
           23895805-23895903,23896002-23896082,23896575-23896634,
           23896656-23896779,23897026-23897120,23897205-23897331,
           23897559-23897662,23897883-23897945
          Length = 502

 Score = 29.1 bits (62), Expect = 3.4
 Identities = 11/29 (37%), Positives = 20/29 (68%)
 Frame = +3

Query: 306 EEPKPLHMWRRTELKRMELGEASVRRFQL 392
           +E K   +W+R + +R E+GE+  +RF+L
Sbjct: 460 KERKNRSLWKRLKQERQEMGESLTQRFRL 488


>12_01_0906 +
           8799284-8799441,8800865-8801690,8801933-8802055,
           8802144-8802210,8802611-8802714,8802798-8802900,
           8803103-8803401,8804009-8804263,8805471-8805776,
           8805866-8806194,8806829-8806916,8807027-8807164,
           8807438-8807458
          Length = 938

 Score = 28.3 bits (60), Expect = 5.9
 Identities = 11/30 (36%), Positives = 16/30 (53%)
 Frame = -2

Query: 240 DLLTIIRFHCRIHLCNIRYVAKTHNSKPKF 151
           D++ I R  C I  CNI+    T  ++P F
Sbjct: 874 DIVNITRIFCSIKRCNIQKYPPTSTTRPSF 903


>10_08_0765 -
           20421813-20423174,20423591-20423771,20423862-20424117,
           20424768-20425095,20425218-20426156,20427015-20427761,
           20428517-20428789
          Length = 1361

 Score = 28.3 bits (60), Expect = 5.9
 Identities = 13/30 (43%), Positives = 18/30 (60%)
 Frame = -1

Query: 583 DRLCSLCSSRHL*EYQYHMYQLTF*FPNNN 494
           +RLC++   +HL E QY M+     FPN N
Sbjct: 666 ERLCTMGYRKHLLEVQYRMHPGINKFPNAN 695


>09_04_0321 - 16664316-16664939,16665369-16666262
          Length = 505

 Score = 28.3 bits (60), Expect = 5.9
 Identities = 10/30 (33%), Positives = 18/30 (60%)
 Frame = -2

Query: 504 PIIMVVMNHWAVSPDHCSTRTIEWMKSDLL 415
           P+I  +M    ++  H +T T+EW  ++LL
Sbjct: 291 PLIRALMTDLFIAGSHTTTTTVEWAMAELL 320


>01_05_0178 - 18971075-18971863,18971960-18972197,18972791-18973041
          Length = 425

 Score = 27.9 bits (59), Expect = 7.8
 Identities = 10/18 (55%), Positives = 15/18 (83%)
 Frame = -2

Query: 147 NNTNN*INGIFKKNHCFY 94
           NN+N+ I+G FKKN C++
Sbjct: 169 NNSNDSISGNFKKNDCYW 186


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,813,029
Number of Sequences: 37544
Number of extensions: 343105
Number of successful extensions: 948
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 924
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 948
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1703141568
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)