Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte18k15
(526 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC039257-1|AAH39257.1| 1391|Homo sapiens nucleoporin 155kDa prot... 134 2e-31
AJ007558-1|CAA07553.1| 1391|Homo sapiens nucleoporin 155 protein. 134 2e-31
AB018334-1|BAA34511.2| 1357|Homo sapiens KIAA0791 protein protein. 114 2e-25
AF165926-1|AAD52966.1| 1332|Homo sapiens NUP155 protein. 108 1e-23
BC150262-1|AAI50263.1| 1516|Homo sapiens RUN and SH3 domain cont... 29 10.0
BC146654-1|AAI46655.1| 1516|Homo sapiens RUSC2 protein protein. 29 10.0
BC132770-1|AAI32771.1| 1516|Homo sapiens RUN and SH3 domain cont... 29 10.0
BC132766-1|AAI32767.1| 1516|Homo sapiens RUN and SH3 domain cont... 29 10.0
BC064843-1|AAH64843.1| 1301|Homo sapiens RUSC2 protein protein. 29 10.0
AL133476-3|CAH70650.1| 1516|Homo sapiens RUN and SH3 domain cont... 29 10.0
AB002373-1|BAA20830.2| 1540|Homo sapiens KIAA0375 protein protein. 29 10.0
>BC039257-1|AAH39257.1| 1391|Homo sapiens nucleoporin 155kDa
protein.
Length = 1391
Score = 134 bits (324), Expect = 2e-31
Identities = 61/122 (50%), Positives = 83/122 (68%), Gaps = 1/122 (0%)
Frame = +2
Query: 164 ESLELAGCTLDRYISFDNSRPSFLELTGIAAQRSPTCSGLNAGDYRNLA-ALLNHPNLSQ 340
E+LE AG +DR + D P EL ++A +PT SG++ DY LL+ PNL +
Sbjct: 21 EALENAGRLIDRQLQEDRMYPDLSELLMVSAPNNPTVSGMSDMDYPLQGPGLLSVPNLPE 80
Query: 341 LKILNKVPLPPEIMEHFAHMQCHCLMGVFPEISRVWLAIDSNIYVWAFEHGSDVAYFDGL 520
+ + +VPLPPE++E F HMQC+C+MGVFP ISR WL IDS+I++W +E G D+AYFDGL
Sbjct: 81 ISSIRRVPLPPELVEQFGHMQCNCMMGVFPPISRAWLTIDSDIFMWNYEDGGDLAYFDGL 140
Query: 521 GE 526
E
Sbjct: 141 SE 142
>AJ007558-1|CAA07553.1| 1391|Homo sapiens nucleoporin 155 protein.
Length = 1391
Score = 134 bits (324), Expect = 2e-31
Identities = 61/122 (50%), Positives = 83/122 (68%), Gaps = 1/122 (0%)
Frame = +2
Query: 164 ESLELAGCTLDRYISFDNSRPSFLELTGIAAQRSPTCSGLNAGDYRNLA-ALLNHPNLSQ 340
E+LE AG +DR + D P EL ++A +PT SG++ DY LL+ PNL +
Sbjct: 21 EALENAGRLIDRQLQEDRMYPDLSELLMVSAPNNPTVSGMSDMDYPLQGPGLLSVPNLPE 80
Query: 341 LKILNKVPLPPEIMEHFAHMQCHCLMGVFPEISRVWLAIDSNIYVWAFEHGSDVAYFDGL 520
+ + +VPLPPE++E F HMQC+C+MGVFP ISR WL IDS+I++W +E G D+AYFDGL
Sbjct: 81 ISSIRRVPLPPELVEQFGHMQCNCMMGVFPPISRAWLTIDSDIFMWNYEDGGDLAYFDGL 140
Query: 521 GE 526
E
Sbjct: 141 SE 142
>AB018334-1|BAA34511.2| 1357|Homo sapiens KIAA0791 protein protein.
Length = 1357
Score = 114 bits (275), Expect = 2e-25
Identities = 49/89 (55%), Positives = 66/89 (74%), Gaps = 1/89 (1%)
Frame = +2
Query: 263 SPTCSGLNAGDYRNLA-ALLNHPNLSQLKILNKVPLPPEIMEHFAHMQCHCLMGVFPEIS 439
+PT SG++ DY LL+ PNL ++ + +VPLPPE++E F HMQC+C+MGVFP IS
Sbjct: 20 NPTVSGMSDMDYPLQGPGLLSVPNLPEISSIRRVPLPPELVEQFGHMQCNCMMGVFPPIS 79
Query: 440 RVWLAIDSNIYVWAFEHGSDVAYFDGLGE 526
R WL IDS+I++W +E G D+AYFDGL E
Sbjct: 80 RAWLTIDSDIFMWNYEDGGDLAYFDGLSE 108
>AF165926-1|AAD52966.1| 1332|Homo sapiens NUP155 protein.
Length = 1332
Score = 108 bits (260), Expect = 1e-23
Identities = 43/71 (60%), Positives = 57/71 (80%)
Frame = +2
Query: 314 LLNHPNLSQLKILNKVPLPPEIMEHFAHMQCHCLMGVFPEISRVWLAIDSNIYVWAFEHG 493
LL+ PNL ++ + +VPLPPE++E F HMQC+C+MGVFP ISR WL IDS+I++W +E G
Sbjct: 13 LLSVPNLPEISSIRRVPLPPELVEQFGHMQCNCMMGVFPPISRAWLTIDSDIFMWNYEDG 72
Query: 494 SDVAYFDGLGE 526
D+AYFDGL E
Sbjct: 73 GDLAYFDGLSE 83
>BC150262-1|AAI50263.1| 1516|Homo sapiens RUN and SH3 domain
containing 2 protein.
Length = 1516
Score = 29.1 bits (62), Expect = 10.0
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = +1
Query: 337 PVENSQQSASATRDYGTLCSYAMP 408
P++ +QQ A D GT CS+++P
Sbjct: 575 PIQEAQQDRGAPLDEGTCCSHSLP 598
>BC146654-1|AAI46655.1| 1516|Homo sapiens RUSC2 protein protein.
Length = 1516
Score = 29.1 bits (62), Expect = 10.0
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = +1
Query: 337 PVENSQQSASATRDYGTLCSYAMP 408
P++ +QQ A D GT CS+++P
Sbjct: 575 PIQEAQQDRGAPLDEGTCCSHSLP 598
>BC132770-1|AAI32771.1| 1516|Homo sapiens RUN and SH3 domain
containing 2 protein.
Length = 1516
Score = 29.1 bits (62), Expect = 10.0
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = +1
Query: 337 PVENSQQSASATRDYGTLCSYAMP 408
P++ +QQ A D GT CS+++P
Sbjct: 575 PIQEAQQDRGAPLDEGTCCSHSLP 598
>BC132766-1|AAI32767.1| 1516|Homo sapiens RUN and SH3 domain
containing 2 protein.
Length = 1516
Score = 29.1 bits (62), Expect = 10.0
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = +1
Query: 337 PVENSQQSASATRDYGTLCSYAMP 408
P++ +QQ A D GT CS+++P
Sbjct: 575 PIQEAQQDRGAPLDEGTCCSHSLP 598
>BC064843-1|AAH64843.1| 1301|Homo sapiens RUSC2 protein protein.
Length = 1301
Score = 29.1 bits (62), Expect = 10.0
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = +1
Query: 337 PVENSQQSASATRDYGTLCSYAMP 408
P++ +QQ A D GT CS+++P
Sbjct: 360 PIQEAQQDRGAPLDEGTCCSHSLP 383
>AL133476-3|CAH70650.1| 1516|Homo sapiens RUN and SH3 domain
containing 2 protein.
Length = 1516
Score = 29.1 bits (62), Expect = 10.0
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = +1
Query: 337 PVENSQQSASATRDYGTLCSYAMP 408
P++ +QQ A D GT CS+++P
Sbjct: 575 PIQEAQQDRGAPLDEGTCCSHSLP 598
>AB002373-1|BAA20830.2| 1540|Homo sapiens KIAA0375 protein protein.
Length = 1540
Score = 29.1 bits (62), Expect = 10.0
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = +1
Query: 337 PVENSQQSASATRDYGTLCSYAMP 408
P++ +QQ A D GT CS+++P
Sbjct: 599 PIQEAQQDRGAPLDEGTCCSHSLP 622
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 79,360,387
Number of Sequences: 237096
Number of extensions: 1741964
Number of successful extensions: 3234
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 3180
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3232
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 5046825278
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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