Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte18k14
         (581 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z68748-8|CAL36498.1|  583|Caenorhabditis elegans Hypothetical pr...    30   1.0  
Z68748-4|CAD27622.1|  617|Caenorhabditis elegans Hypothetical pr...    30   1.0  
Z68748-3|CAA92953.2|  615|Caenorhabditis elegans Hypothetical pr...    30   1.0  
Z80344-8|CAB02490.2| 2268|Caenorhabditis elegans Hypothetical pr...    29   3.2  
Z79755-7|CAB02103.1|  466|Caenorhabditis elegans Hypothetical pr...    29   3.2  
AL117203-22|CAB60425.1| 2268|Caenorhabditis elegans Hypothetical...    29   3.2  
AC006714-6|AAN84810.2|  339|Caenorhabditis elegans Hypothetical ...    28   4.2  
Z71181-10|CAA94901.2|  678|Caenorhabditis elegans Hypothetical p...    28   5.6  
Z71177-11|CAA94873.2|  678|Caenorhabditis elegans Hypothetical p...    28   5.6  
U39996-8|AAA81094.2| 1102|Caenorhabditis elegans Hypothetical pr...    28   5.6  
U41027-5|AAC48195.1|  314|Caenorhabditis elegans Hypothetical pr...    27   9.7  
AF026213-8|AAB71303.1|  226|Caenorhabditis elegans Hypothetical ...    27   9.7  
AF000265-5|AAK68197.1|  331|Caenorhabditis elegans Hypothetical ...    27   9.7  

>Z68748-8|CAL36498.1|  583|Caenorhabditis elegans Hypothetical
           protein F13H10.3c protein.
          Length = 583

 Score = 30.3 bits (65), Expect = 1.0
 Identities = 15/31 (48%), Positives = 22/31 (70%), Gaps = 1/31 (3%)
 Frame = -1

Query: 167 PLMHFKNDTFFVKTAFLRTKAIVY-VDFVYS 78
           PLM+FK+ TFF K   L T +++Y + FV+S
Sbjct: 327 PLMNFKSPTFFTKFNVLGTISVMYLLMFVFS 357


>Z68748-4|CAD27622.1|  617|Caenorhabditis elegans Hypothetical
           protein F13H10.3b protein.
          Length = 617

 Score = 30.3 bits (65), Expect = 1.0
 Identities = 15/31 (48%), Positives = 22/31 (70%), Gaps = 1/31 (3%)
 Frame = -1

Query: 167 PLMHFKNDTFFVKTAFLRTKAIVY-VDFVYS 78
           PLM+FK+ TFF K   L T +++Y + FV+S
Sbjct: 361 PLMNFKSPTFFTKFNVLGTISVMYLLMFVFS 391


>Z68748-3|CAA92953.2|  615|Caenorhabditis elegans Hypothetical
           protein F13H10.3a protein.
          Length = 615

 Score = 30.3 bits (65), Expect = 1.0
 Identities = 15/31 (48%), Positives = 22/31 (70%), Gaps = 1/31 (3%)
 Frame = -1

Query: 167 PLMHFKNDTFFVKTAFLRTKAIVY-VDFVYS 78
           PLM+FK+ TFF K   L T +++Y + FV+S
Sbjct: 359 PLMNFKSPTFFTKFNVLGTISVMYLLMFVFS 389


>Z80344-8|CAB02490.2| 2268|Caenorhabditis elegans Hypothetical protein
            F15D4.7 protein.
          Length = 2268

 Score = 28.7 bits (61), Expect = 3.2
 Identities = 12/23 (52%), Positives = 15/23 (65%)
 Frame = +3

Query: 489  IPGPLWSLWSLWSVRTLRTMRPL 557
            + G L  LW LWS+R L T+R L
Sbjct: 2011 LEGVLNELWKLWSLRYLSTLREL 2033


>Z79755-7|CAB02103.1|  466|Caenorhabditis elegans Hypothetical
           protein F43G9.10 protein.
          Length = 466

 Score = 28.7 bits (61), Expect = 3.2
 Identities = 14/49 (28%), Positives = 22/49 (44%)
 Frame = -2

Query: 487 GKAHKARMDHTGKGIDTDRKARMDHKARMARTEDTVQGTDRTAHRDHMD 341
           GKA +   ++     ++DR+   D   R  R  ++    DR  HR H D
Sbjct: 51  GKAPEYARNYDSDSSESDRETDRDDDRRRRRRRESSDEEDRRRHRRHED 99


>AL117203-22|CAB60425.1| 2268|Caenorhabditis elegans Hypothetical
            protein F15D4.7 protein.
          Length = 2268

 Score = 28.7 bits (61), Expect = 3.2
 Identities = 12/23 (52%), Positives = 15/23 (65%)
 Frame = +3

Query: 489  IPGPLWSLWSLWSVRTLRTMRPL 557
            + G L  LW LWS+R L T+R L
Sbjct: 2011 LEGVLNELWKLWSLRYLSTLREL 2033


>AC006714-6|AAN84810.2|  339|Caenorhabditis elegans Hypothetical
           protein Y119D3B.12a protein.
          Length = 339

 Score = 28.3 bits (60), Expect = 4.2
 Identities = 14/46 (30%), Positives = 21/46 (45%)
 Frame = -2

Query: 526 DHRDHRDHKGPGIGKAHKARMDHTGKGIDTDRKARMDHKARMARTE 389
           DHRDHR     G  + H+   +H  +  D  R  R +   R  R++
Sbjct: 290 DHRDHRHRDHRGEHREHREHKEH--RRDDRHRSERSERSERSERSD 333


>Z71181-10|CAA94901.2|  678|Caenorhabditis elegans Hypothetical
           protein K07C5.8 protein.
          Length = 678

 Score = 27.9 bits (59), Expect = 5.6
 Identities = 13/36 (36%), Positives = 21/36 (58%)
 Frame = +1

Query: 172 ALTSAGTKKSTAPLLAARSDASVSETWRPGRGDQLV 279
           A+ S     S + L++A SD++V   W PG G+ L+
Sbjct: 468 AIWSVAYHSSNSRLVSASSDSTV-RLWEPGNGEPLI 502


>Z71177-11|CAA94873.2|  678|Caenorhabditis elegans Hypothetical
           protein K07C5.8 protein.
          Length = 678

 Score = 27.9 bits (59), Expect = 5.6
 Identities = 13/36 (36%), Positives = 21/36 (58%)
 Frame = +1

Query: 172 ALTSAGTKKSTAPLLAARSDASVSETWRPGRGDQLV 279
           A+ S     S + L++A SD++V   W PG G+ L+
Sbjct: 468 AIWSVAYHSSNSRLVSASSDSTV-RLWEPGNGEPLI 502


>U39996-8|AAA81094.2| 1102|Caenorhabditis elegans Hypothetical
           protein C56E6.6 protein.
          Length = 1102

 Score = 27.9 bits (59), Expect = 5.6
 Identities = 14/31 (45%), Positives = 19/31 (61%)
 Frame = -1

Query: 278 TSWSPRPGRQVSETDASLRAANNGAVLFLVP 186
           TSWSP   R +S + +S+  AN G  LF +P
Sbjct: 763 TSWSPTAFRDLSHSISSINMANTG--LFSMP 791


>U41027-5|AAC48195.1|  314|Caenorhabditis elegans Hypothetical
           protein R08E3.2 protein.
          Length = 314

 Score = 27.1 bits (57), Expect = 9.7
 Identities = 15/46 (32%), Positives = 28/46 (60%), Gaps = 2/46 (4%)
 Frame = +1

Query: 130 LTKNVSFLKCIKG--RALTSAGTKKSTAPLLAARSDASVSETWRPG 261
           L +N   +KC+ G  +A +S+ ++KS +  L A  +  ++ETW+ G
Sbjct: 131 LGRNCEPVKCVPGSNQAYSSSNSEKSIS--LLASFNTKMAETWQTG 174


>AF026213-8|AAB71303.1|  226|Caenorhabditis elegans Hypothetical
           protein F08F1.3 protein.
          Length = 226

 Score = 27.1 bits (57), Expect = 9.7
 Identities = 15/55 (27%), Positives = 28/55 (50%)
 Frame = -1

Query: 254 RQVSETDASLRAANNGAVLFLVPAEVKARPLMHFKNDTFFVKTAFLRTKAIVYVD 90
           R++S++   L+  +N +++FL+   +       FK+  F     FL  K +VY D
Sbjct: 123 RRMSKSSEKLKTVHN-SLIFLIVIFIAKFVNFSFKHVVFSSNIKFLHLKILVYFD 176


>AF000265-5|AAK68197.1|  331|Caenorhabditis elegans Hypothetical
           protein C18E3.5 protein.
          Length = 331

 Score = 27.1 bits (57), Expect = 9.7
 Identities = 13/43 (30%), Positives = 22/43 (51%)
 Frame = +3

Query: 135 EKCVVLKMHQGASFDFRGHQEKHRAVIGGPKRRVRLRDLAPGT 263
           E   VLK H+GA  + + + +    V  G  + VR+ D+  G+
Sbjct: 70  ENFAVLKGHKGAIMEVKFNADSSHLVSAGTDKTVRVWDMETGS 112


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,253,346
Number of Sequences: 27780
Number of extensions: 168785
Number of successful extensions: 655
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 596
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 653
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1215936170
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)