Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte18k13
         (614 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X97197-1|CAA65831.1|  366|Drosophila melanogaster spliceosomal p...    32   0.71 
BT023489-1|AAY84889.1|  347|Drosophila melanogaster RE50839p pro...    32   0.71 
AE014298-857|AAF46136.1|  347|Drosophila melanogaster CG3780-PA ...    32   0.71 
AY119087-1|AAM50947.1|  704|Drosophila melanogaster LP11564p pro...    29   5.0  
AE014134-1105|AAF52394.3|  704|Drosophila melanogaster CG31638-P...    29   5.0  
AE014134-600|AAF51111.1|  181|Drosophila melanogaster CG31952-PA...    29   6.6  
AY069250-1|AAL39395.1|  420|Drosophila melanogaster GM02445p pro...    28   8.7  
AE014298-2202|AAF48500.1|  420|Drosophila melanogaster CG11679-P...    28   8.7  

>X97197-1|CAA65831.1|  366|Drosophila melanogaster spliceosomal
           protein protein.
          Length = 366

 Score = 31.9 bits (69), Expect = 0.71
 Identities = 12/25 (48%), Positives = 14/25 (56%)
 Frame = -2

Query: 475 WFPSL*PAPGSKRPRDGWRPPPLTF 401
           W P   PAP  + P   WRPPP+ F
Sbjct: 326 WAPPGMPAPPPRPPPTNWRPPPVPF 350


>BT023489-1|AAY84889.1|  347|Drosophila melanogaster RE50839p
           protein.
          Length = 347

 Score = 31.9 bits (69), Expect = 0.71
 Identities = 12/25 (48%), Positives = 14/25 (56%)
 Frame = -2

Query: 475 WFPSL*PAPGSKRPRDGWRPPPLTF 401
           W P   PAP  + P   WRPPP+ F
Sbjct: 307 WAPPGMPAPPPRPPPTNWRPPPVPF 331


>AE014298-857|AAF46136.1|  347|Drosophila melanogaster CG3780-PA
           protein.
          Length = 347

 Score = 31.9 bits (69), Expect = 0.71
 Identities = 12/25 (48%), Positives = 14/25 (56%)
 Frame = -2

Query: 475 WFPSL*PAPGSKRPRDGWRPPPLTF 401
           W P   PAP  + P   WRPPP+ F
Sbjct: 307 WAPPGMPAPPPRPPPTNWRPPPVPF 331


>AY119087-1|AAM50947.1|  704|Drosophila melanogaster LP11564p
           protein.
          Length = 704

 Score = 29.1 bits (62), Expect = 5.0
 Identities = 19/66 (28%), Positives = 29/66 (43%), Gaps = 7/66 (10%)
 Frame = +1

Query: 295 DPNTEAFQMRAQWKKVDNCRALWFERWSWLLDER-------KQTLAEADAIRREAASTLA 453
           +    A QM    K   +C A W E+WS + +ER       KQ   + D + +EA S   
Sbjct: 56  EARARAAQMEKTMKWWSDCTANWREKWSKVRNERNKAREESKQLSLKLDGVMKEAHSLKR 115

Query: 454 QVKETE 471
           +  + E
Sbjct: 116 EKNDLE 121


>AE014134-1105|AAF52394.3|  704|Drosophila melanogaster CG31638-PA
           protein.
          Length = 704

 Score = 29.1 bits (62), Expect = 5.0
 Identities = 19/66 (28%), Positives = 29/66 (43%), Gaps = 7/66 (10%)
 Frame = +1

Query: 295 DPNTEAFQMRAQWKKVDNCRALWFERWSWLLDER-------KQTLAEADAIRREAASTLA 453
           +    A QM    K   +C A W E+WS + +ER       KQ   + D + +EA S   
Sbjct: 56  EARARAAQMEKTMKWWSDCTANWREKWSKVRNERNKAREESKQLSLKLDGVMKEAHSLKR 115

Query: 454 QVKETE 471
           +  + E
Sbjct: 116 EKNDLE 121


>AE014134-600|AAF51111.1|  181|Drosophila melanogaster CG31952-PA
           protein.
          Length = 181

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 14/33 (42%), Positives = 21/33 (63%)
 Frame = +1

Query: 385 LDERKQTLAEADAIRREAASTLAQVKETETTKA 483
           +DE K+  AEA A  +EAA++ AQ  +T+   A
Sbjct: 1   MDEGKKKAAEAAAAAKEAAASAAQAAKTKAAGA 33


>AY069250-1|AAL39395.1|  420|Drosophila melanogaster GM02445p
           protein.
          Length = 420

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 13/41 (31%), Positives = 23/41 (56%)
 Frame = +1

Query: 379 WLLDERKQTLAEADAIRREAASTLAQVKETETTKALKPVPV 501
           W++D R+   +EA +    A +  A V  T+T   +KP+P+
Sbjct: 27  WMMDRRRWLASEATS-SAAAPAQAASVPRTQTQPRVKPLPL 66


>AE014298-2202|AAF48500.1|  420|Drosophila melanogaster CG11679-PA
           protein.
          Length = 420

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 13/41 (31%), Positives = 23/41 (56%)
 Frame = +1

Query: 379 WLLDERKQTLAEADAIRREAASTLAQVKETETTKALKPVPV 501
           W++D R+   +EA +    A +  A V  T+T   +KP+P+
Sbjct: 27  WMMDRRRWLASEATS-SAAAPAQAASVPRTQTQPRVKPLPL 66


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,115,418
Number of Sequences: 53049
Number of extensions: 636831
Number of successful extensions: 2287
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 2159
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2287
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2517878700
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)