Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte18k06
         (639 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC013590-1|AAH13590.1|  721|Homo sapiens eukaryotic translation ...   114   2e-25
AK091646-1|BAC03712.1|  721|Homo sapiens protein ( Homo sapiens ...   114   2e-25
U23028-1|AAC50646.1|  641|Homo sapiens eIF-2Bepsilon protein.          81   3e-15
AK222951-1|BAD96671.1|  420|Homo sapiens GDP-mannose pyrophospho...    32   2.0  
BC115382-1|AAI15383.1|  246|Homo sapiens XRCC6 binding protein 1...    31   4.6  
BC115381-1|AAI15382.1|  246|Homo sapiens XRCC6 binding protein 1...    31   4.6  
BC012776-1|AAH12776.3|  246|Homo sapiens XRCC6 binding protein 1...    31   4.6  
AF078164-1|AAD31085.1|  288|Homo sapiens Ku70-binding protein pr...    31   4.6  
BC018728-1|AAH18728.1|  401|Homo sapiens EIF2B3 protein protein.       30   8.0  
AL136380-7|CAI23133.1|  197|Homo sapiens eukaryotic translation ...    30   8.0  
AL136380-6|CAI23132.1|  412|Homo sapiens eukaryotic translation ...    30   8.0  
AL136380-5|CAI23131.1|  452|Homo sapiens eukaryotic translation ...    30   8.0  
AK024006-1|BAB14770.1|  452|Homo sapiens NA.  protein.                 30   8.0  
AF257077-1|AAF91351.1|  452|Homo sapiens eukaryotic translation ...    30   8.0  

>BC013590-1|AAH13590.1|  721|Homo sapiens eukaryotic translation
           initiation factor 2B, subunit 5 epsilon, 82kDa protein.
          Length = 721

 Score =  114 bits (275), Expect = 2e-25
 Identities = 61/173 (35%), Positives = 106/173 (61%), Gaps = 1/173 (0%)
 Frame = +3

Query: 114 VQAVVIMDTFNSNFSPLTDNKPMGFLEVAGVPLIDYVLESLALGGVGEAILFCCQNGQKI 293
           +QAV++ D+F+  F P++ ++P   L +A V LIDY LE L   GV E  +FCC    +I
Sbjct: 43  LQAVLVADSFDRRFFPISKDQPRVLLPLANVALIDYTLEFLTATGVQETFVFCCWKAAQI 102

Query: 294 KEHVQKHQDNKSLWSLTMDIQILMSDTCQTMGDVMRELDAAALLKGYFVLAGINSITNMN 473
           KEH+ K +  +   SL + ++I+ S+  +++GDV+R++DA AL++  F+L   + I+N+N
Sbjct: 103 KEHLLKSKWCRPT-SLNV-VRIITSELYRSLGDVLRDVDAKALVRSDFLLVYGDVISNIN 160

Query: 474 FASLLEQHKQTCKKDKG-TAMTLVYKKLSWEHPLISSDRSTFLAANENTKKVL 629
               LE+H+   K +K  + MT+++K+ S  HP    + +  +A +  T +VL
Sbjct: 161 ITRALEEHRLRRKLEKNVSVMTMIFKESSPSHPTRCHEDNVVVAVDSTTNRVL 213


>AK091646-1|BAC03712.1|  721|Homo sapiens protein ( Homo sapiens
           cDNA FLJ34327 fis, clone FEBRA2009022, highly similar to
           TRANSLATION INITIATION FACTOR EIF-2B EPSILON SUBUNIT. ).
          Length = 721

 Score =  114 bits (275), Expect = 2e-25
 Identities = 61/173 (35%), Positives = 106/173 (61%), Gaps = 1/173 (0%)
 Frame = +3

Query: 114 VQAVVIMDTFNSNFSPLTDNKPMGFLEVAGVPLIDYVLESLALGGVGEAILFCCQNGQKI 293
           +QAV++ D+F+  F P++ ++P   L +A V LIDY LE L   GV E  +FCC    +I
Sbjct: 43  LQAVLVADSFDRRFFPISKDQPRVLLPLANVALIDYTLEFLTATGVQETFVFCCWKAAQI 102

Query: 294 KEHVQKHQDNKSLWSLTMDIQILMSDTCQTMGDVMRELDAAALLKGYFVLAGINSITNMN 473
           KEH+ K +  +   SL + ++I+ S+  +++GDV+R++DA AL++  F+L   + I+N+N
Sbjct: 103 KEHLLKSKWCRPT-SLNV-VRIITSELYRSLGDVLRDVDAKALVRSDFLLVYGDVISNIN 160

Query: 474 FASLLEQHKQTCKKDKG-TAMTLVYKKLSWEHPLISSDRSTFLAANENTKKVL 629
               LE+H+   K +K  + MT+++K+ S  HP    + +  +A +  T +VL
Sbjct: 161 ITRALEEHRLRRKLEKNVSVMTMIFKESSPSHPTRCHEDNVVVAVDSTTNRVL 213


>U23028-1|AAC50646.1|  641|Homo sapiens eIF-2Bepsilon protein.
          Length = 641

 Score = 81.0 bits (191), Expect = 3e-15
 Identities = 45/135 (33%), Positives = 80/135 (59%), Gaps = 1/135 (0%)
 Frame = +3

Query: 228 ESLALGGVGEAILFCCQNGQKIKEHVQKHQDNKSLWSLTMDIQILMSDTCQTMGDVMREL 407
           E L   GV E  +FCC    +IKEH+ K +  +   SL + ++I+ S+  +++GDV+R++
Sbjct: 1   EFLTATGVQETFVFCCWKAAQIKEHLLKSKWCRPT-SLNV-VRIITSELYRSLGDVLRDV 58

Query: 408 DAAALLKGYFVLAGINSITNMNFASLLEQHKQTCKKDKG-TAMTLVYKKLSWEHPLISSD 584
           DA AL++  F+L   + I+N+N    LE+H+   K +K  + MT+++K+ S  HP    +
Sbjct: 59  DAKALVRSDFLLVYGDVISNINITRALEEHRLRRKLEKNVSVMTMIFKESSPSHPTRCHE 118

Query: 585 RSTFLAANENTKKVL 629
            +  +A +  T +VL
Sbjct: 119 DNVVVAVDSTTNRVL 133


>AK222951-1|BAD96671.1|  420|Homo sapiens GDP-mannose
           pyrophosphorylase A variant protein.
          Length = 420

 Score = 31.9 bits (69), Expect = 2.0
 Identities = 16/43 (37%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
 Frame = +3

Query: 147 SNFSPLTDNKPMGFLEVAGVPLIDYVLESLA-LGGVGEAILFC 272
           + F PL+   P     VAGVP+I + +E+ A + G+ E +L C
Sbjct: 15  TRFRPLSFEVPKPLFPVAGVPMIQHHIEACAQVPGMQEILLIC 57


>BC115382-1|AAI15383.1|  246|Homo sapiens XRCC6 binding protein 1
           protein.
          Length = 246

 Score = 30.7 bits (66), Expect = 4.6
 Identities = 14/38 (36%), Positives = 22/38 (57%)
 Frame = +3

Query: 450 INSITNMNFASLLEQHKQTCKKDKGTAMTLVYKKLSWE 563
           +N I  ++F   L+QH QTC +D+ T   L  + +S E
Sbjct: 164 VNEIFRLHFG--LKQHHQTCVRDRATLSILAVRNISKE 199


>BC115381-1|AAI15382.1|  246|Homo sapiens XRCC6 binding protein 1
           protein.
          Length = 246

 Score = 30.7 bits (66), Expect = 4.6
 Identities = 14/38 (36%), Positives = 22/38 (57%)
 Frame = +3

Query: 450 INSITNMNFASLLEQHKQTCKKDKGTAMTLVYKKLSWE 563
           +N I  ++F   L+QH QTC +D+ T   L  + +S E
Sbjct: 164 VNEIFRLHFG--LKQHHQTCVRDRATLSILAVRNISKE 199


>BC012776-1|AAH12776.3|  246|Homo sapiens XRCC6 binding protein 1
           protein.
          Length = 246

 Score = 30.7 bits (66), Expect = 4.6
 Identities = 14/38 (36%), Positives = 22/38 (57%)
 Frame = +3

Query: 450 INSITNMNFASLLEQHKQTCKKDKGTAMTLVYKKLSWE 563
           +N I  ++F   L+QH QTC +D+ T   L  + +S E
Sbjct: 164 VNEIFRLHFG--LKQHHQTCVRDRATLSILAVRNISKE 199


>AF078164-1|AAD31085.1|  288|Homo sapiens Ku70-binding protein
           protein.
          Length = 288

 Score = 30.7 bits (66), Expect = 4.6
 Identities = 14/38 (36%), Positives = 22/38 (57%)
 Frame = +3

Query: 450 INSITNMNFASLLEQHKQTCKKDKGTAMTLVYKKLSWE 563
           +N I  ++F   L+QH QTC +D+ T   L  + +S E
Sbjct: 206 VNEIFRLHFG--LKQHHQTCVRDRATLSILAVRNISKE 241


>BC018728-1|AAH18728.1|  401|Homo sapiens EIF2B3 protein protein.
          Length = 401

 Score = 29.9 bits (64), Expect = 8.0
 Identities = 21/58 (36%), Positives = 27/58 (46%)
 Frame = +3

Query: 117 QAVVIMDTFNSNFSPLTDNKPMGFLEVAGVPLIDYVLESLALGGVGEAILFCCQNGQK 290
           QAVV+     S  + LT + P   L V   PLI Y L  L   G  E I+   ++ QK
Sbjct: 4   QAVVMAVGGGSRMTDLTSSIPKPLLPVGNKPLIWYPLNLLERVGFEEVIVVTTRDVQK 61


>AL136380-7|CAI23133.1|  197|Homo sapiens eukaryotic translation
           initiation factor 2B, subunit 3 gamma, 58kDa protein.
          Length = 197

 Score = 29.9 bits (64), Expect = 8.0
 Identities = 21/58 (36%), Positives = 27/58 (46%)
 Frame = +3

Query: 117 QAVVIMDTFNSNFSPLTDNKPMGFLEVAGVPLIDYVLESLALGGVGEAILFCCQNGQK 290
           QAVV+     S  + LT + P   L V   PLI Y L  L   G  E I+   ++ QK
Sbjct: 4   QAVVMAVGGGSRMTDLTSSIPKPLLPVGNKPLIWYPLNLLERVGFEEVIVVTTRDVQK 61


>AL136380-6|CAI23132.1|  412|Homo sapiens eukaryotic translation
           initiation factor 2B, subunit 3 gamma, 58kDa protein.
          Length = 412

 Score = 29.9 bits (64), Expect = 8.0
 Identities = 21/58 (36%), Positives = 27/58 (46%)
 Frame = +3

Query: 117 QAVVIMDTFNSNFSPLTDNKPMGFLEVAGVPLIDYVLESLALGGVGEAILFCCQNGQK 290
           QAVV+     S  + LT + P   L V   PLI Y L  L   G  E I+   ++ QK
Sbjct: 4   QAVVMAVGGGSRMTDLTSSIPKPLLPVGNKPLIWYPLNLLERVGFEEVIVVTTRDVQK 61


>AL136380-5|CAI23131.1|  452|Homo sapiens eukaryotic translation
           initiation factor 2B, subunit 3 gamma, 58kDa protein.
          Length = 452

 Score = 29.9 bits (64), Expect = 8.0
 Identities = 21/58 (36%), Positives = 27/58 (46%)
 Frame = +3

Query: 117 QAVVIMDTFNSNFSPLTDNKPMGFLEVAGVPLIDYVLESLALGGVGEAILFCCQNGQK 290
           QAVV+     S  + LT + P   L V   PLI Y L  L   G  E I+   ++ QK
Sbjct: 4   QAVVMAVGGGSRMTDLTSSIPKPLLPVGNKPLIWYPLNLLERVGFEEVIVVTTRDVQK 61


>AK024006-1|BAB14770.1|  452|Homo sapiens NA.  protein.
          Length = 452

 Score = 29.9 bits (64), Expect = 8.0
 Identities = 21/58 (36%), Positives = 27/58 (46%)
 Frame = +3

Query: 117 QAVVIMDTFNSNFSPLTDNKPMGFLEVAGVPLIDYVLESLALGGVGEAILFCCQNGQK 290
           QAVV+     S  + LT + P   L V   PLI Y L  L   G  E I+   ++ QK
Sbjct: 4   QAVVMAVGGGSRMTDLTSSIPKPLLPVGNKPLIWYPLNLLERVGFEEVIVVTTRDVQK 61


>AF257077-1|AAF91351.1|  452|Homo sapiens eukaryotic translation
           initiation factor EIF2B subunit 3 protein.
          Length = 452

 Score = 29.9 bits (64), Expect = 8.0
 Identities = 21/58 (36%), Positives = 27/58 (46%)
 Frame = +3

Query: 117 QAVVIMDTFNSNFSPLTDNKPMGFLEVAGVPLIDYVLESLALGGVGEAILFCCQNGQK 290
           QAVV+     S  + LT + P   L V   PLI Y L  L   G  E I+   ++ QK
Sbjct: 4   QAVVMAVGGGSRMTDLTSSIPKPLLPVGNKPLIWYPLNLLERVGFEEVIVVTTRDVQK 61


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 83,898,010
Number of Sequences: 237096
Number of extensions: 1658395
Number of successful extensions: 3148
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 3043
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3144
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7028963750
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)