Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte18j24
         (587 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ435338-1|ABD92653.1|  135|Apis mellifera OBP21 protein.              26   0.24 
AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    24   1.3  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    23   1.7  
DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.               22   3.9  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    21   6.8  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    21   6.8  
AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine beta-sy...    21   6.8  
AF388659-3|AAK71993.1|  548|Apis mellifera 1D-myo-inositol-trisp...    21   9.0  
AF388659-2|AAK71994.1|  463|Apis mellifera 1D-myo-inositol-trisp...    21   9.0  

>DQ435338-1|ABD92653.1|  135|Apis mellifera OBP21 protein.
          Length = 135

 Score = 26.2 bits (55), Expect = 0.24
 Identities = 25/75 (33%), Positives = 38/75 (50%), Gaps = 5/75 (6%)
 Frame = +2

Query: 347 DKSLDD--NDFSDLVNDEQIVQDIDEESISESN--DDIQSLSEVS-EETSDIKSDESDVV 511
           +K  DD  N   D+ N++  VQ   E  I + N  DD  + +EV   E ++I  DE++V 
Sbjct: 41  EKKEDDFRNGIIDVENEK--VQLFSECLIKKFNAYDDGGNFNEVVVREIAEIYLDENEVN 98

Query: 512 SLINSLGESSGADVY 556
            LI      S AD++
Sbjct: 99  KLITECSAISDADIH 113


>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 12/33 (36%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
 Frame = +2

Query: 413 DEESISESNDDIQSLSEVSEETSDIKS-DESDV 508
           +E++I+  N D     EVS E ++ KS  +SD+
Sbjct: 165 EEQTINRKNSDYLDNQEVSMENTENKSCTDSDI 197


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 12/24 (50%), Positives = 16/24 (66%)
 Frame = +2

Query: 446 IQSLSEVSEETSDIKSDESDVVSL 517
           I+ +S+ S  TS +  DESDVV L
Sbjct: 420 IRKISDCST-TSSLSGDESDVVEL 442



 Score = 21.0 bits (42), Expect = 9.0
 Identities = 10/45 (22%), Positives = 25/45 (55%)
 Frame = +2

Query: 401 VQDIDEESISESNDDIQSLSEVSEETSDIKSDESDVVSLINSLGE 535
           V+D++E ++ E+N +     + S ++   ++  S  + L + LG+
Sbjct: 528 VKDVEEGNVEETNSEETHQKDGSSDSVIKRTVVSSYLQLQDLLGD 572


>DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.
          Length = 828

 Score = 22.2 bits (45), Expect = 3.9
 Identities = 10/20 (50%), Positives = 11/20 (55%)
 Frame = +2

Query: 446 IQSLSEVSEETSDIKSDESD 505
           IQ   +  EET D   DESD
Sbjct: 75  IQQAGKPKEETDDKDDDESD 94


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 21.4 bits (43), Expect = 6.8
 Identities = 13/43 (30%), Positives = 19/43 (44%)
 Frame = +2

Query: 410 IDEESISESNDDIQSLSEVSEETSDIKSDESDVVSLINSLGES 538
           ID E        +Q+    ++ TS    D+S     +NSLG S
Sbjct: 196 IDPELTESEQHRLQNRLYTNDSTSSKTDDDSIDFDRMNSLGLS 238


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 21.4 bits (43), Expect = 6.8
 Identities = 13/43 (30%), Positives = 19/43 (44%)
 Frame = +2

Query: 410 IDEESISESNDDIQSLSEVSEETSDIKSDESDVVSLINSLGES 538
           ID E        +Q+    ++ TS    D+S     +NSLG S
Sbjct: 234 IDPELTESEQHRLQNRLYTNDSTSSKTDDDSIDFDRMNSLGLS 276


>AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine
           beta-synthase protein.
          Length = 504

 Score = 21.4 bits (43), Expect = 6.8
 Identities = 8/21 (38%), Positives = 14/21 (66%)
 Frame = +2

Query: 215 TILKSNIIDPALDFDDNTSVS 277
           T+L  N+ID  +  +DN S++
Sbjct: 271 TVLDRNVIDKWIKTEDNESLN 291


>AF388659-3|AAK71993.1|  548|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
          Length = 548

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 10/45 (22%), Positives = 25/45 (55%)
 Frame = +2

Query: 401 VQDIDEESISESNDDIQSLSEVSEETSDIKSDESDVVSLINSLGE 535
           V+D++E ++ E+N +     + S ++   ++  S  + L + LG+
Sbjct: 294 VKDVEEGNVEETNSEETHQKDGSSDSVIKRTVVSSYLQLQDLLGD 338


>AF388659-2|AAK71994.1|  463|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform B protein.
          Length = 463

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 10/45 (22%), Positives = 25/45 (55%)
 Frame = +2

Query: 401 VQDIDEESISESNDDIQSLSEVSEETSDIKSDESDVVSLINSLGE 535
           V+D++E ++ E+N +     + S ++   ++  S  + L + LG+
Sbjct: 209 VKDVEEGNVEETNSEETHQKDGSSDSVIKRTVVSSYLQLQDLLGD 253


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 113,172
Number of Sequences: 438
Number of extensions: 1900
Number of successful extensions: 11
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17115420
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)