Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte18j23
         (450 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC001198-1|AAH01198.1|  458|Homo sapiens Unknown (protein for IM...    37   0.037
AK001103-1|BAA91503.1|  257|Homo sapiens protein ( Homo sapiens ...    37   0.037
BC036649-1|AAH36649.1|  765|Homo sapiens Sec23 homolog A (S. cer...    29   5.5  

>BC001198-1|AAH01198.1|  458|Homo sapiens Unknown (protein for
           IMAGE:3355871) protein.
          Length = 458

 Score = 36.7 bits (81), Expect = 0.037
 Identities = 28/95 (29%), Positives = 40/95 (42%), Gaps = 7/95 (7%)
 Frame = +1

Query: 43  VEAIDCSNFHHGGIRYEGXXXXXXXXXXXXXXXXXXXHVDVWCLDRVAGLSGQSLEYLDI 222
           VEA+D  +     I YEG                   HVD WCL R+  L+  SL+ L +
Sbjct: 327 VEAVDAGDCD---INYEGLDNLLRLKELQSLSLQRCCHVDDWCLSRLYPLA-DSLQELSL 382

Query: 223 RGCK-------ICIGCINALARMEVLKYLLVSDPG 306
            GC         C+  +  L R+++     VS+PG
Sbjct: 383 AGCPRISERGLACLHHLQNLRRLDISDLPAVSNPG 417


>AK001103-1|BAA91503.1|  257|Homo sapiens protein ( Homo sapiens
           cDNA FLJ10241 fis, clone HEMBB1000623. ).
          Length = 257

 Score = 36.7 bits (81), Expect = 0.037
 Identities = 28/95 (29%), Positives = 40/95 (42%), Gaps = 7/95 (7%)
 Frame = +1

Query: 43  VEAIDCSNFHHGGIRYEGXXXXXXXXXXXXXXXXXXXHVDVWCLDRVAGLSGQSLEYLDI 222
           VEA+D  +     I YEG                   HVD WCL R+  L+  SL+ L +
Sbjct: 126 VEAVDAGDCD---INYEGLDNLLRLKELQSLSLQRCSHVDDWCLSRLYPLA-DSLQELSL 181

Query: 223 RGCK-------ICIGCINALARMEVLKYLLVSDPG 306
            GC         C+  +  L R+++     VS+PG
Sbjct: 182 AGCPRISERGLACLHHLQNLRRLDISDLPAVSNPG 216


>BC036649-1|AAH36649.1|  765|Homo sapiens Sec23 homolog A (S.
           cerevisiae) protein.
          Length = 765

 Score = 29.5 bits (63), Expect = 5.5
 Identities = 15/60 (25%), Positives = 24/60 (40%)
 Frame = -2

Query: 296 ETSKYFKTSILANALIHPMQILQPLMSRYSKDWPDNPATLSKHQTSTCLLFLKDNHFNKL 117
           + S Y++   +   L   + ++QP+M  YS   P  P  L         + L D  F  L
Sbjct: 598 DESSYYRHHFMRQDLTQSLIMIQPIMYAYSFSGPPEPVLLDSSSILADRILLMDTFFQIL 657


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 54,434,861
Number of Sequences: 237096
Number of extensions: 905212
Number of successful extensions: 1650
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1617
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1650
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 3701294870
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)