Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte18j14
         (343 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC103950-1|AAI03951.1| 1111|Homo sapiens KCNT2 protein protein.        33   0.23 
BC103949-1|AAI03950.1| 1068|Homo sapiens KCNT2 protein protein.        33   0.23 
BC103948-1|AAI03949.1| 1111|Homo sapiens KCNT2 protein protein.        33   0.23 
AY359444-1|AAR06170.1| 1135|Homo sapiens sodium- and chloride-ac...    33   0.23 
AL591604-2|CAH72932.1| 1111|Homo sapiens potassium channel, subf...    33   0.23 
AL591604-1|CAH72933.1| 1135|Homo sapiens potassium channel, subf...    33   0.23 
AL358853-2|CAH71958.1| 1111|Homo sapiens potassium channel, subf...    33   0.23 
AL358853-1|CAH71957.1| 1135|Homo sapiens potassium channel, subf...    33   0.23 
AL139137-2|CAI16092.1| 1111|Homo sapiens potassium channel, subf...    33   0.23 
AL139137-1|CAI16091.1| 1135|Homo sapiens potassium channel, subf...    33   0.23 
AL138931-2|CAI15624.1| 1111|Homo sapiens potassium channel, subf...    33   0.23 
AL138931-1|CAI15623.1| 1135|Homo sapiens potassium channel, subf...    33   0.23 
AL158822-4|CAI39240.1| 1315|Homo sapiens potassium channel, subf...    29   2.9  
AB037843-1|BAA92660.1| 1151|Homo sapiens KIAA1422 protein protein.     29   2.9  
BC067105-1|AAH67105.1|  329|Homo sapiens tetraspanin 17 protein.       29   3.8  
BC010405-1|AAH10405.1|  263|Homo sapiens TSPAN17 protein protein.      29   3.8  
AF174603-1|AAF04524.1|  123|Homo sapiens F-box protein Fbx23 pro...    29   3.8  
AF269286-1|AAG23169.1|  134|Homo sapiens HC6 protein.                  29   5.0  

>BC103950-1|AAI03951.1| 1111|Homo sapiens KCNT2 protein protein.
          Length = 1111

 Score = 33.1 bits (72), Expect = 0.23
 Identities = 18/51 (35%), Positives = 27/51 (52%)
 Frame = -2

Query: 330 PSILHFINYVPFLHFIKIKWYFKKRCFTHVYVSSWKTWKSSENVLLTYNRA 178
           P IL  IN VPF+  I I W   +  F  V+++ W    + EN++   +RA
Sbjct: 139 PFILEIINAVPFI--ISIFWPSLRNLFVPVFLNCWLAKHALENMINDLHRA 187


>BC103949-1|AAI03950.1| 1068|Homo sapiens KCNT2 protein protein.
          Length = 1068

 Score = 33.1 bits (72), Expect = 0.23
 Identities = 18/51 (35%), Positives = 27/51 (52%)
 Frame = -2

Query: 330 PSILHFINYVPFLHFIKIKWYFKKRCFTHVYVSSWKTWKSSENVLLTYNRA 178
           P IL  IN VPF+  I I W   +  F  V+++ W    + EN++   +RA
Sbjct: 139 PFILEIINAVPFI--ISIFWPSLRNLFVPVFLNCWLAKHALENMINDLHRA 187


>BC103948-1|AAI03949.1| 1111|Homo sapiens KCNT2 protein protein.
          Length = 1111

 Score = 33.1 bits (72), Expect = 0.23
 Identities = 18/51 (35%), Positives = 27/51 (52%)
 Frame = -2

Query: 330 PSILHFINYVPFLHFIKIKWYFKKRCFTHVYVSSWKTWKSSENVLLTYNRA 178
           P IL  IN VPF+  I I W   +  F  V+++ W    + EN++   +RA
Sbjct: 139 PFILEIINAVPFI--ISIFWPSLRNLFVPVFLNCWLAKHALENMINDLHRA 187


>AY359444-1|AAR06170.1| 1135|Homo sapiens sodium- and
           chloride-activated ATP-sensitive potassium channel
           protein.
          Length = 1135

 Score = 33.1 bits (72), Expect = 0.23
 Identities = 18/51 (35%), Positives = 27/51 (52%)
 Frame = -2

Query: 330 PSILHFINYVPFLHFIKIKWYFKKRCFTHVYVSSWKTWKSSENVLLTYNRA 178
           P IL  IN VPF+  I I W   +  F  V+++ W    + EN++   +RA
Sbjct: 139 PFILEIINAVPFI--ISIFWPSLRNLFVPVFLNCWLAKHALENMINDLHRA 187


>AL591604-2|CAH72932.1| 1111|Homo sapiens potassium channel,
           subfamily T, member 2 protein.
          Length = 1111

 Score = 33.1 bits (72), Expect = 0.23
 Identities = 18/51 (35%), Positives = 27/51 (52%)
 Frame = -2

Query: 330 PSILHFINYVPFLHFIKIKWYFKKRCFTHVYVSSWKTWKSSENVLLTYNRA 178
           P IL  IN VPF+  I I W   +  F  V+++ W    + EN++   +RA
Sbjct: 139 PFILEIINAVPFI--ISIFWPSLRNLFVPVFLNCWLAKHALENMINDLHRA 187


>AL591604-1|CAH72933.1| 1135|Homo sapiens potassium channel,
           subfamily T, member 2 protein.
          Length = 1135

 Score = 33.1 bits (72), Expect = 0.23
 Identities = 18/51 (35%), Positives = 27/51 (52%)
 Frame = -2

Query: 330 PSILHFINYVPFLHFIKIKWYFKKRCFTHVYVSSWKTWKSSENVLLTYNRA 178
           P IL  IN VPF+  I I W   +  F  V+++ W    + EN++   +RA
Sbjct: 139 PFILEIINAVPFI--ISIFWPSLRNLFVPVFLNCWLAKHALENMINDLHRA 187


>AL358853-2|CAH71958.1| 1111|Homo sapiens potassium channel,
           subfamily T, member 2 protein.
          Length = 1111

 Score = 33.1 bits (72), Expect = 0.23
 Identities = 18/51 (35%), Positives = 27/51 (52%)
 Frame = -2

Query: 330 PSILHFINYVPFLHFIKIKWYFKKRCFTHVYVSSWKTWKSSENVLLTYNRA 178
           P IL  IN VPF+  I I W   +  F  V+++ W    + EN++   +RA
Sbjct: 139 PFILEIINAVPFI--ISIFWPSLRNLFVPVFLNCWLAKHALENMINDLHRA 187


>AL358853-1|CAH71957.1| 1135|Homo sapiens potassium channel,
           subfamily T, member 2 protein.
          Length = 1135

 Score = 33.1 bits (72), Expect = 0.23
 Identities = 18/51 (35%), Positives = 27/51 (52%)
 Frame = -2

Query: 330 PSILHFINYVPFLHFIKIKWYFKKRCFTHVYVSSWKTWKSSENVLLTYNRA 178
           P IL  IN VPF+  I I W   +  F  V+++ W    + EN++   +RA
Sbjct: 139 PFILEIINAVPFI--ISIFWPSLRNLFVPVFLNCWLAKHALENMINDLHRA 187


>AL139137-2|CAI16092.1| 1111|Homo sapiens potassium channel,
           subfamily T, member 2 protein.
          Length = 1111

 Score = 33.1 bits (72), Expect = 0.23
 Identities = 18/51 (35%), Positives = 27/51 (52%)
 Frame = -2

Query: 330 PSILHFINYVPFLHFIKIKWYFKKRCFTHVYVSSWKTWKSSENVLLTYNRA 178
           P IL  IN VPF+  I I W   +  F  V+++ W    + EN++   +RA
Sbjct: 139 PFILEIINAVPFI--ISIFWPSLRNLFVPVFLNCWLAKHALENMINDLHRA 187


>AL139137-1|CAI16091.1| 1135|Homo sapiens potassium channel,
           subfamily T, member 2 protein.
          Length = 1135

 Score = 33.1 bits (72), Expect = 0.23
 Identities = 18/51 (35%), Positives = 27/51 (52%)
 Frame = -2

Query: 330 PSILHFINYVPFLHFIKIKWYFKKRCFTHVYVSSWKTWKSSENVLLTYNRA 178
           P IL  IN VPF+  I I W   +  F  V+++ W    + EN++   +RA
Sbjct: 139 PFILEIINAVPFI--ISIFWPSLRNLFVPVFLNCWLAKHALENMINDLHRA 187


>AL138931-2|CAI15624.1| 1111|Homo sapiens potassium channel,
           subfamily T, member 2 protein.
          Length = 1111

 Score = 33.1 bits (72), Expect = 0.23
 Identities = 18/51 (35%), Positives = 27/51 (52%)
 Frame = -2

Query: 330 PSILHFINYVPFLHFIKIKWYFKKRCFTHVYVSSWKTWKSSENVLLTYNRA 178
           P IL  IN VPF+  I I W   +  F  V+++ W    + EN++   +RA
Sbjct: 139 PFILEIINAVPFI--ISIFWPSLRNLFVPVFLNCWLAKHALENMINDLHRA 187


>AL138931-1|CAI15623.1| 1135|Homo sapiens potassium channel,
           subfamily T, member 2 protein.
          Length = 1135

 Score = 33.1 bits (72), Expect = 0.23
 Identities = 18/51 (35%), Positives = 27/51 (52%)
 Frame = -2

Query: 330 PSILHFINYVPFLHFIKIKWYFKKRCFTHVYVSSWKTWKSSENVLLTYNRA 178
           P IL  IN VPF+  I I W   +  F  V+++ W    + EN++   +RA
Sbjct: 139 PFILEIINAVPFI--ISIFWPSLRNLFVPVFLNCWLAKHALENMINDLHRA 187


>AL158822-4|CAI39240.1| 1315|Homo sapiens potassium channel,
           subfamily T, member 1 protein.
          Length = 1315

 Score = 29.5 bits (63), Expect = 2.9
 Identities = 15/49 (30%), Positives = 27/49 (55%)
 Frame = -2

Query: 324 ILHFINYVPFLHFIKIKWYFKKRCFTHVYVSSWKTWKSSENVLLTYNRA 178
           +L  IN +PF+  I I W   +  F  V+++ W    + EN++  ++RA
Sbjct: 279 VLEMINTLPFI--ITIFWPPLRNLFIPVFLNCWLAKHALENMINDFHRA 325


>AB037843-1|BAA92660.1| 1151|Homo sapiens KIAA1422 protein protein.
          Length = 1151

 Score = 29.5 bits (63), Expect = 2.9
 Identities = 15/49 (30%), Positives = 27/49 (55%)
 Frame = -2

Query: 324 ILHFINYVPFLHFIKIKWYFKKRCFTHVYVSSWKTWKSSENVLLTYNRA 178
           +L  IN +PF+  I I W   +  F  V+++ W    + EN++  ++RA
Sbjct: 235 VLEMINTLPFI--ITIFWPPLRNLFIPVFLNCWLAKHALENMINDFHRA 281


>BC067105-1|AAH67105.1|  329|Homo sapiens tetraspanin 17 protein.
          Length = 329

 Score = 29.1 bits (62), Expect = 3.8
 Identities = 12/31 (38%), Positives = 18/31 (58%)
 Frame = -1

Query: 100 FEIGYSITFWVIFLFFCKRGMWLKLEFGLLT 8
           F  G++I FWV+   F   G+W   E G+L+
Sbjct: 20  FLFGFNIVFWVLGALFLAIGLWAWGEKGVLS 50


>BC010405-1|AAH10405.1|  263|Homo sapiens TSPAN17 protein protein.
          Length = 263

 Score = 29.1 bits (62), Expect = 3.8
 Identities = 12/31 (38%), Positives = 18/31 (58%)
 Frame = -1

Query: 100 FEIGYSITFWVIFLFFCKRGMWLKLEFGLLT 8
           F  G++I FWV+   F   G+W   E G+L+
Sbjct: 20  FLFGFNIVFWVLGALFLAIGLWAWGEKGVLS 50


>AF174603-1|AAF04524.1|  123|Homo sapiens F-box protein Fbx23
           protein.
          Length = 123

 Score = 29.1 bits (62), Expect = 3.8
 Identities = 12/31 (38%), Positives = 18/31 (58%)
 Frame = -1

Query: 100 FEIGYSITFWVIFLFFCKRGMWLKLEFGLLT 8
           F  G++I FWV+   F   G+W   E G+L+
Sbjct: 32  FLFGFNIVFWVLGALFLAIGLWAWGEKGVLS 62


>AF269286-1|AAG23169.1|  134|Homo sapiens HC6 protein.
          Length = 134

 Score = 28.7 bits (61), Expect = 5.0
 Identities = 21/81 (25%), Positives = 38/81 (46%)
 Frame = -3

Query: 341 FFLNRPFYILLITCLFYILLK*SGILRSVVLLMYMFRLGRLGSHPRMCS*HTTGLRQNRS 162
           +FL+   ++LL+T  F++      + RS+ L   +   G + +H   C     G R + +
Sbjct: 38  YFLSFCAWLLLLTMAFFVFCFLFFLRRSLALSPRLECSGTISAH---CKLRLPGSRHSPA 94

Query: 161 ISVRIATCTELLGL*KCSFCI 99
            + R+A  T    L +  FCI
Sbjct: 95  SAYRVAGTTGTCHLARLIFCI 115


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 47,592,675
Number of Sequences: 237096
Number of extensions: 944047
Number of successful extensions: 2013
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1972
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2002
length of database: 76,859,062
effective HSP length: 80
effective length of database: 57,891,382
effective search space used: 1910415606
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)