Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte18j08
         (647 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC064404-1|AAH64404.1|  719|Homo sapiens nucleolar protein 11 pr...    44   6e-04
AY598333-1|AAT06744.1|  719|Homo sapiens L14 protein.                  44   6e-04
AK023702-1|BAB14647.1|  719|Homo sapiens protein ( Homo sapiens ...    44   6e-04

>BC064404-1|AAH64404.1|  719|Homo sapiens nucleolar protein 11
           protein.
          Length = 719

 Score = 43.6 bits (98), Expect = 6e-04
 Identities = 21/67 (31%), Positives = 34/67 (50%), Gaps = 2/67 (2%)
 Frame = -1

Query: 374 LSDQKQVGGWTSKDH--ITSAVIYDDTNGNYIGVFNNNIIKTWQEDSANLDKSKKFKVRL 201
           +SDQK +G W+ K    IT   + +   G Y+ V +N +++ W  +  NLDK  K  +  
Sbjct: 48  VSDQKPLGSWSVKQGQIITCPAVCNFQTGEYVVVHDNKVLRIWNNEDVNLDKVFKATLSA 107

Query: 200 NNFTIFS 180
             + I S
Sbjct: 108 EVYRILS 114


>AY598333-1|AAT06744.1|  719|Homo sapiens L14 protein.
          Length = 719

 Score = 43.6 bits (98), Expect = 6e-04
 Identities = 21/67 (31%), Positives = 34/67 (50%), Gaps = 2/67 (2%)
 Frame = -1

Query: 374 LSDQKQVGGWTSKDH--ITSAVIYDDTNGNYIGVFNNNIIKTWQEDSANLDKSKKFKVRL 201
           +SDQK +G W+ K    IT   + +   G Y+ V +N +++ W  +  NLDK  K  +  
Sbjct: 48  VSDQKPLGSWSVKQGQIITCPAVCNFQTGEYVVVHDNKVLRIWNNEDVNLDKVFKATLSA 107

Query: 200 NNFTIFS 180
             + I S
Sbjct: 108 EVYRILS 114


>AK023702-1|BAB14647.1|  719|Homo sapiens protein ( Homo sapiens
           cDNA FLJ13640 fis, clone PLACE1011221. ).
          Length = 719

 Score = 43.6 bits (98), Expect = 6e-04
 Identities = 21/67 (31%), Positives = 34/67 (50%), Gaps = 2/67 (2%)
 Frame = -1

Query: 374 LSDQKQVGGWTSKDH--ITSAVIYDDTNGNYIGVFNNNIIKTWQEDSANLDKSKKFKVRL 201
           +SDQK +G W+ K    IT   + +   G Y+ V +N +++ W  +  NLDK  K  +  
Sbjct: 48  VSDQKPLGSWSVKQGQIITCPAVCNFQTGEYVVVHDNKVLRIWNNEDVNLDKVFKATLSA 107

Query: 200 NNFTIFS 180
             + I S
Sbjct: 108 EVYRILS 114


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 79,751,427
Number of Sequences: 237096
Number of extensions: 1396401
Number of successful extensions: 2770
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2707
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2767
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7197658880
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)