Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte18j07
         (436 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY534997-1|AAT07395.1|  352|Drosophila melanogaster XK-related p...    29   3.6  
AE014298-2366|AAN09393.1|  352|Drosophila melanogaster CG32579-P...    29   3.6  
AE013599-2659|AAF57718.2|  188|Drosophila melanogaster CG18537-P...    27   8.3  

>AY534997-1|AAT07395.1|  352|Drosophila melanogaster XK-related
           protein.
          Length = 352

 Score = 28.7 bits (61), Expect = 3.6
 Identities = 16/61 (26%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
 Frame = -1

Query: 298 CYDFLIAFFCEVVDAVMSVTETPKTFN--VAFHITIVFVFSSIRPKSTNYRFKVVITLRF 125
           C+   I FF   VD+ M     P  ++  + F +  +F+F+ ++   T Y++   +T  F
Sbjct: 250 CFYGTIVFF---VDSPMIAKSRPMNYSYCLCFGVVYLFIFTPVKDAPTKYKYAFYLT--F 304

Query: 124 C 122
           C
Sbjct: 305 C 305


>AE014298-2366|AAN09393.1|  352|Drosophila melanogaster CG32579-PA
           protein.
          Length = 352

 Score = 28.7 bits (61), Expect = 3.6
 Identities = 16/61 (26%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
 Frame = -1

Query: 298 CYDFLIAFFCEVVDAVMSVTETPKTFN--VAFHITIVFVFSSIRPKSTNYRFKVVITLRF 125
           C+   I FF   VD+ M     P  ++  + F +  +F+F+ ++   T Y++   +T  F
Sbjct: 250 CFYGTIVFF---VDSPMIAKSRPMNYSYCLCFGVVYLFIFTPVKDAPTKYKYAFYLT--F 304

Query: 124 C 122
           C
Sbjct: 305 C 305


>AE013599-2659|AAF57718.2|  188|Drosophila melanogaster CG18537-PA
           protein.
          Length = 188

 Score = 27.5 bits (58), Expect = 8.3
 Identities = 11/33 (33%), Positives = 18/33 (54%)
 Frame = -2

Query: 396 KTVFYSVVHSYSKNIILKSLCVLQGHSCFRGSF 298
           K  FY  ++SY K++I+K+         F+G F
Sbjct: 99  KQTFYDYLNSYYKDVIMKNFAPCSNVPQFKGKF 131


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,934,989
Number of Sequences: 53049
Number of extensions: 315708
Number of successful extensions: 800
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 785
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 800
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1376136036
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)