Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte18j05
         (309 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK002015-1|BAA92036.1|  267|Homo sapiens protein ( Homo sapiens ...    28   6.4  

>AK002015-1|BAA92036.1|  267|Homo sapiens protein ( Homo sapiens
           cDNA FLJ11153 fis, clone PLACE1006917, weakly similar to
           HSH49 PROTEIN. ).
          Length = 267

 Score = 27.9 bits (59), Expect = 6.4
 Identities = 11/28 (39%), Positives = 17/28 (60%)
 Frame = +1

Query: 19  RFKFRELSTHFPRTVSIKYYSYHSFNQN 102
           + +FR  S+H P+ VS+ Y  YH  N +
Sbjct: 81  KIQFRSGSSHAPQDVSLSYPQYHVGNSS 108


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,579,389
Number of Sequences: 237096
Number of extensions: 484378
Number of successful extensions: 1569
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 1535
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1569
length of database: 76,859,062
effective HSP length: 78
effective length of database: 58,365,574
effective search space used: 1400773776
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)