Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte18j01
(688 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L23648-8|AAA28030.1| 503|Caenorhabditis elegans Hypothetical pr... 30 1.8
Z69902-10|CAI59119.1| 4053|Caenorhabditis elegans Hypothetical p... 29 3.1
Z69902-9|CAH10779.1| 4061|Caenorhabditis elegans Hypothetical pr... 29 3.1
Z69902-8|CAA93765.2| 4064|Caenorhabditis elegans Hypothetical pr... 29 3.1
AY551966-1|AAS65430.1| 4064|Caenorhabditis elegans TRR-1 protein. 29 3.1
U58732-6|AAB00596.3| 333|Caenorhabditis elegans Serpentine rece... 29 4.1
U58732-5|AAW88398.1| 337|Caenorhabditis elegans Serpentine rece... 29 4.1
Z83216-4|CAB62781.1| 314|Caenorhabditis elegans Hypothetical pr... 28 5.4
Z92780-8|CAI46553.1| 587|Caenorhabditis elegans Hypothetical pr... 28 7.2
Z92780-7|CAI46552.1| 624|Caenorhabditis elegans Hypothetical pr... 28 7.2
Z92780-6|CAI46551.1| 691|Caenorhabditis elegans Hypothetical pr... 28 7.2
Z92780-5|CAI46550.1| 532|Caenorhabditis elegans Hypothetical pr... 28 7.2
Z81068-16|CAJ30230.1| 587|Caenorhabditis elegans Hypothetical p... 28 7.2
Z81068-15|CAB02980.2| 624|Caenorhabditis elegans Hypothetical p... 28 7.2
Z81068-14|CAJ30229.1| 691|Caenorhabditis elegans Hypothetical p... 28 7.2
Z81068-13|CAJ30228.1| 532|Caenorhabditis elegans Hypothetical p... 28 7.2
Z81068-11|CAB02981.1| 454|Caenorhabditis elegans Hypothetical p... 28 7.2
EF443133-1|ABO31113.1| 656|Caenorhabditis elegans LIM-9 isoform... 28 7.2
>L23648-8|AAA28030.1| 503|Caenorhabditis elegans Hypothetical
protein F44B9.2 protein.
Length = 503
Score = 29.9 bits (64), Expect = 1.8
Identities = 15/58 (25%), Positives = 28/58 (48%)
Frame = +2
Query: 488 LGYLICGFPAHIISKITPAVFKKIDVEIFKKLSLCSVNQTKVTRNYSIR*MPKLICNL 661
+G L+ +++KI PA F+K+ ++ K + + K N+ R + K C L
Sbjct: 266 VGILLFNLEGDVLAKINPADFRKLWSPVYHKEHILVLADAKNAENHWSRHVIKFTCQL 323
>Z69902-10|CAI59119.1| 4053|Caenorhabditis elegans Hypothetical
protein C47D12.1c protein.
Length = 4053
Score = 29.1 bits (62), Expect = 3.1
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = +2
Query: 434 YRRYYGDMWYEDSDYINELGYLICGFPAHII 526
++ +G WY S IN +GY+I FP +
Sbjct: 1181 FKLCHGPAWYARSGGINAIGYMIESFPRKFV 1211
>Z69902-9|CAH10779.1| 4061|Caenorhabditis elegans Hypothetical protein
C47D12.1b protein.
Length = 4061
Score = 29.1 bits (62), Expect = 3.1
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = +2
Query: 434 YRRYYGDMWYEDSDYINELGYLICGFPAHII 526
++ +G WY S IN +GY+I FP +
Sbjct: 1187 FKLCHGPAWYARSGGINAIGYMIESFPRKFV 1217
>Z69902-8|CAA93765.2| 4064|Caenorhabditis elegans Hypothetical protein
C47D12.1a protein.
Length = 4064
Score = 29.1 bits (62), Expect = 3.1
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = +2
Query: 434 YRRYYGDMWYEDSDYINELGYLICGFPAHII 526
++ +G WY S IN +GY+I FP +
Sbjct: 1187 FKLCHGPAWYARSGGINAIGYMIESFPRKFV 1217
>AY551966-1|AAS65430.1| 4064|Caenorhabditis elegans TRR-1 protein.
Length = 4064
Score = 29.1 bits (62), Expect = 3.1
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = +2
Query: 434 YRRYYGDMWYEDSDYINELGYLICGFPAHII 526
++ +G WY S IN +GY+I FP +
Sbjct: 1187 FKLCHGPAWYARSGGINAIGYMIESFPRKFV 1217
>U58732-6|AAB00596.3| 333|Caenorhabditis elegans Serpentine
receptor, class v protein5, isoform a protein.
Length = 333
Score = 28.7 bits (61), Expect = 4.1
Identities = 14/52 (26%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
Frame = -2
Query: 378 YRNQMFFSESQNVQQTFSIYSHERAYGSKENHIHGIL-HFDSTVHFIVKVVI 226
Y ++FF ++ F YS A+ + HGI+ S H+ +K+V+
Sbjct: 47 YYAELFFFVEFSITMRFRKYSSLYAFFEPDTEFHGIIPRIVSGFHYYIKIVV 98
>U58732-5|AAW88398.1| 337|Caenorhabditis elegans Serpentine
receptor, class v protein5, isoform b protein.
Length = 337
Score = 28.7 bits (61), Expect = 4.1
Identities = 14/52 (26%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
Frame = -2
Query: 378 YRNQMFFSESQNVQQTFSIYSHERAYGSKENHIHGIL-HFDSTVHFIVKVVI 226
Y ++FF ++ F YS A+ + HGI+ S H+ +K+V+
Sbjct: 47 YYAELFFFVEFSITMRFRKYSSLYAFFEPDTEFHGIIPRIVSGFHYYIKIVV 98
>Z83216-4|CAB62781.1| 314|Caenorhabditis elegans Hypothetical
protein C08F11.5 protein.
Length = 314
Score = 28.3 bits (60), Expect = 5.4
Identities = 20/55 (36%), Positives = 25/55 (45%), Gaps = 4/55 (7%)
Frame = +1
Query: 202 AEQ-ENIHFYDDFYDEMDSR--IKMENSMNMIFFGPVSSF-MRIDAESLLHILTF 354
AEQ ENI FY D YDE + + +K+E F + E LH TF
Sbjct: 177 AEQIENITFYSDEYDEENPKELVKLEQWKKAKFIEIYGGYTFPFKVEDFLHFTTF 231
>Z92780-8|CAI46553.1| 587|Caenorhabditis elegans Hypothetical
protein F25H5.1b protein.
Length = 587
Score = 27.9 bits (59), Expect = 7.2
Identities = 15/52 (28%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
Frame = -3
Query: 455 CRHSNVCMKPQVYRTVIKSHIKIVRDIG-IKCFLVKVKMCNKLSASILMNEL 303
CRH + +VY + + +I DIG + + K C+K S + NE+
Sbjct: 210 CRHLTSQTERKVYEEFVNARNEIALDIGYVSSNINKAMECHKCSGILETNEM 261
>Z92780-7|CAI46552.1| 624|Caenorhabditis elegans Hypothetical
protein F25H5.1a protein.
Length = 624
Score = 27.9 bits (59), Expect = 7.2
Identities = 15/52 (28%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
Frame = -3
Query: 455 CRHSNVCMKPQVYRTVIKSHIKIVRDIG-IKCFLVKVKMCNKLSASILMNEL 303
CRH + +VY + + +I DIG + + K C+K S + NE+
Sbjct: 247 CRHLTSQTERKVYEEFVNARNEIALDIGYVSSNINKAMECHKCSGILETNEM 298
>Z92780-6|CAI46551.1| 691|Caenorhabditis elegans Hypothetical
protein F25H5.1f protein.
Length = 691
Score = 27.9 bits (59), Expect = 7.2
Identities = 15/52 (28%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
Frame = -3
Query: 455 CRHSNVCMKPQVYRTVIKSHIKIVRDIG-IKCFLVKVKMCNKLSASILMNEL 303
CRH + +VY + + +I DIG + + K C+K S + NE+
Sbjct: 247 CRHLTSQTERKVYEEFVNARNEIALDIGYVSSNINKAMECHKCSGILETNEM 298
>Z92780-5|CAI46550.1| 532|Caenorhabditis elegans Hypothetical
protein F25H5.1c protein.
Length = 532
Score = 27.9 bits (59), Expect = 7.2
Identities = 15/52 (28%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
Frame = -3
Query: 455 CRHSNVCMKPQVYRTVIKSHIKIVRDIG-IKCFLVKVKMCNKLSASILMNEL 303
CRH + +VY + + +I DIG + + K C+K S + NE+
Sbjct: 155 CRHLTSQTERKVYEEFVNARNEIALDIGYVSSNINKAMECHKCSGILETNEM 206
>Z81068-16|CAJ30230.1| 587|Caenorhabditis elegans Hypothetical
protein F25H5.1b protein.
Length = 587
Score = 27.9 bits (59), Expect = 7.2
Identities = 15/52 (28%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
Frame = -3
Query: 455 CRHSNVCMKPQVYRTVIKSHIKIVRDIG-IKCFLVKVKMCNKLSASILMNEL 303
CRH + +VY + + +I DIG + + K C+K S + NE+
Sbjct: 210 CRHLTSQTERKVYEEFVNARNEIALDIGYVSSNINKAMECHKCSGILETNEM 261
>Z81068-15|CAB02980.2| 624|Caenorhabditis elegans Hypothetical
protein F25H5.1a protein.
Length = 624
Score = 27.9 bits (59), Expect = 7.2
Identities = 15/52 (28%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
Frame = -3
Query: 455 CRHSNVCMKPQVYRTVIKSHIKIVRDIG-IKCFLVKVKMCNKLSASILMNEL 303
CRH + +VY + + +I DIG + + K C+K S + NE+
Sbjct: 247 CRHLTSQTERKVYEEFVNARNEIALDIGYVSSNINKAMECHKCSGILETNEM 298
>Z81068-14|CAJ30229.1| 691|Caenorhabditis elegans Hypothetical
protein F25H5.1f protein.
Length = 691
Score = 27.9 bits (59), Expect = 7.2
Identities = 15/52 (28%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
Frame = -3
Query: 455 CRHSNVCMKPQVYRTVIKSHIKIVRDIG-IKCFLVKVKMCNKLSASILMNEL 303
CRH + +VY + + +I DIG + + K C+K S + NE+
Sbjct: 247 CRHLTSQTERKVYEEFVNARNEIALDIGYVSSNINKAMECHKCSGILETNEM 298
>Z81068-13|CAJ30228.1| 532|Caenorhabditis elegans Hypothetical
protein F25H5.1c protein.
Length = 532
Score = 27.9 bits (59), Expect = 7.2
Identities = 15/52 (28%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
Frame = -3
Query: 455 CRHSNVCMKPQVYRTVIKSHIKIVRDIG-IKCFLVKVKMCNKLSASILMNEL 303
CRH + +VY + + +I DIG + + K C+K S + NE+
Sbjct: 155 CRHLTSQTERKVYEEFVNARNEIALDIGYVSSNINKAMECHKCSGILETNEM 206
>Z81068-11|CAB02981.1| 454|Caenorhabditis elegans Hypothetical
protein F25H5.1e protein.
Length = 454
Score = 27.9 bits (59), Expect = 7.2
Identities = 15/52 (28%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
Frame = -3
Query: 455 CRHSNVCMKPQVYRTVIKSHIKIVRDIG-IKCFLVKVKMCNKLSASILMNEL 303
CRH + +VY + + +I DIG + + K C+K S + NE+
Sbjct: 77 CRHLTSQTERKVYEEFVNARNEIALDIGYVSSNINKAMECHKCSGILETNEM 128
>EF443133-1|ABO31113.1| 656|Caenorhabditis elegans LIM-9 isoform
protein.
Length = 656
Score = 27.9 bits (59), Expect = 7.2
Identities = 15/52 (28%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
Frame = -3
Query: 455 CRHSNVCMKPQVYRTVIKSHIKIVRDIG-IKCFLVKVKMCNKLSASILMNEL 303
CRH + +VY + + +I DIG + + K C+K S + NE+
Sbjct: 247 CRHLTSQTERKVYEEFVNARNEIALDIGYVSSNINKAMECHKCSGILETNEM 298
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,813,713
Number of Sequences: 27780
Number of extensions: 346556
Number of successful extensions: 903
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 878
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 903
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1571291122
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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