Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte18i22
(572 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC14C8.15 |||triglyceride lipase-cholesterol esterase |Schizos... 42 6e-05
SPBC16A3.12c |||triglyceride lipase-cholesterol esterase |Schizo... 42 8e-05
SPCC1672.09 |||triglyceride lipase-cholesterol esterase |Schizos... 35 0.010
SPAC17H9.10c |ddb1||damaged DNA binding protein Ddb1 |Schizosacc... 27 2.6
SPAC167.01 |ppk4||serine/threonine protein kinase Ppk4 |Schizosa... 26 3.4
SPBC1685.14c |||Vid27 family protein|Schizosaccharomyces pombe|c... 26 4.5
SPBC12C2.10c |pst1|SPBC21D10.01c|Clr6 histone deacetylase comple... 26 4.5
SPAPB2B4.03 |cig2|cyc17|cyclin Cig2|Schizosaccharomyces pombe|ch... 25 6.0
SPAC12B10.01c ||SPAC31F12.02c, SPAC637.15c|ubiquitin-protein lig... 25 7.9
SPAC29E6.07 ||SPAC30.11|sequence orphan|Schizosaccharomyces pomb... 25 7.9
>SPBC14C8.15 |||triglyceride lipase-cholesterol esterase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 460
Score = 41.9 bits (94), Expect = 6e-05
Identities = 20/35 (57%), Positives = 23/35 (65%)
Frame = +1
Query: 418 TPQLIALHGYSAESHTVVTDDGYILTVHRIPYPKK 522
T L ALHGY E H V T DGY+L +HR+ Y KK
Sbjct: 75 TIDLCALHGYDLEEHFVRTTDGYLLGLHRV-YKKK 108
>SPBC16A3.12c |||triglyceride lipase-cholesterol esterase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 443
Score = 41.5 bits (93), Expect = 8e-05
Identities = 19/43 (44%), Positives = 26/43 (60%)
Frame = +1
Query: 442 GYSAESHTVVTDDGYILTVHRIPYPKKITNRIIPRKTVLLHHG 570
GY E H V T D +IL +HRI +PK+ ++ R+ V HHG
Sbjct: 83 GYRVEEHLVRTQDNFILCLHRITHPKQSQHK---REVVYCHHG 122
>SPCC1672.09 |||triglyceride lipase-cholesterol esterase
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 467
Score = 34.7 bits (76), Expect = 0.010
Identities = 21/53 (39%), Positives = 29/53 (54%), Gaps = 4/53 (7%)
Frame = +1
Query: 424 QLIALHGYSAESHTVVTDDGYILTVHRI--PYPKKITNRIIPRK--TVLLHHG 570
++ + GY E H V T+D YIL +HRI P +I + P+K V HHG
Sbjct: 83 EMCKISGYYVEDHLVRTEDDYILCIHRISKDSPGRIGSP-HPKKLPVVYCHHG 134
>SPAC17H9.10c |ddb1||damaged DNA binding protein Ddb1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1072
Score = 26.6 bits (56), Expect = 2.6
Identities = 9/26 (34%), Positives = 19/26 (73%)
Frame = +1
Query: 205 ENVRNKITSYFGINNKDESEYSGDDK 282
+N+R I S+ G+++K+ EY G+++
Sbjct: 992 DNIRKVIPSFGGLSHKEWKEYRGENE 1017
>SPAC167.01 |ppk4||serine/threonine protein kinase Ppk4
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1072
Score = 26.2 bits (55), Expect = 3.4
Identities = 17/76 (22%), Positives = 33/76 (43%)
Frame = +1
Query: 298 NKFNEYISEAQQNDNKLFDVIASHQLEYKCSDDDPSILMTTPQLIALHGYSAESHTVVTD 477
+ FNE S+A N+ D+++ + +E + DP + +L + E+ +
Sbjct: 588 SNFNEIESQASFEQNQTLDILSENIVEIQDKSTDP---LQKSLDSSLKSHLPEATVIQNT 644
Query: 478 DGYILTVHRIPYPKKI 525
DG + YP+ I
Sbjct: 645 DGSVTVNSLTVYPEVI 660
>SPBC1685.14c |||Vid27 family protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 801
Score = 25.8 bits (54), Expect = 4.5
Identities = 11/36 (30%), Positives = 23/36 (63%)
Frame = -2
Query: 451 LSIHEELSVVEWSSKSMDRRPNICTPTDERRSRQII 344
+++ +++++V+ SS R +ICTP + RS+ I
Sbjct: 761 VALPDDVAMVDKSSLRRPTRESICTPVKKLRSKHDI 796
>SPBC12C2.10c |pst1|SPBC21D10.01c|Clr6 histone deacetylase complex
subunit Pst1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1522
Score = 25.8 bits (54), Expect = 4.5
Identities = 12/40 (30%), Positives = 26/40 (65%), Gaps = 2/40 (5%)
Frame = +1
Query: 298 NKFNEYISEAQQNDNKLFDVIASHQLEYKC--SDDDPSIL 411
++ +E+ISE ++ND++ V ++ ++ C +D D S+L
Sbjct: 951 SEIDEHISEHEENDDESSSVFSTGEVWVNCKFTDTDGSLL 990
>SPAPB2B4.03 |cig2|cyc17|cyclin Cig2|Schizosaccharomyces pombe|chr
1|||Manual
Length = 411
Score = 25.4 bits (53), Expect = 6.0
Identities = 17/53 (32%), Positives = 27/53 (50%)
Frame = -1
Query: 377 SN**EAITSNNLLSFCWASEMYSLNLFFILTCLSSPEYSDSSLLLIPKYDVIL 219
SN + ++SN L++ +A E++ L CL +P+Y D L K IL
Sbjct: 120 SNVDDHLSSNPLMAEEYAPEIFEYIRKLDLKCLPNPKYMDQQKELTWKMREIL 172
>SPAC12B10.01c ||SPAC31F12.02c, SPAC637.15c|ubiquitin-protein ligase
E3 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1647
Score = 25.0 bits (52), Expect = 7.9
Identities = 13/40 (32%), Positives = 21/40 (52%), Gaps = 2/40 (5%)
Frame = +1
Query: 355 VIASHQLE--YKCSDDDPSILMTTPQLIALHGYSAESHTV 468
V+ H+L + D+D S ++A HGY+ ES T+
Sbjct: 1512 VLTEHELVTLFGTVDEDWSYATLMKSIVADHGYTMESPTI 1551
>SPAC29E6.07 ||SPAC30.11|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 116
Score = 25.0 bits (52), Expect = 7.9
Identities = 10/39 (25%), Positives = 19/39 (48%)
Frame = -2
Query: 322 PKCIH*IYFLFLLAYHPQNTPIHLYC*FRSTTLSYFVHF 206
P+C+ +YF +LL +P+ + R T L + +
Sbjct: 37 PQCLFIVYFFYLLHVRINTSPLFIKTTTRPTALIHITKY 75
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,358,598
Number of Sequences: 5004
Number of extensions: 48847
Number of successful extensions: 172
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 166
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 172
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 244081442
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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