Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte18h20
         (568 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC011047-1|AAH11047.1|  681|Homo sapiens growth arrest-specific ...    31   2.1  
BC007624-1|AAH07624.1|  681|Homo sapiens growth arrest-specific ...    31   2.1  
BC001782-1|AAH01782.1|  681|Homo sapiens growth arrest-specific ...    31   2.1  
AK223602-1|BAD97322.1|  681|Homo sapiens growth arrest-specific ...    31   2.1  
AK093386-1|BAC04150.1|  681|Homo sapiens protein ( Homo sapiens ...    31   2.1  
AB001343-1|BAA20386.1|  111|Homo sapiens DDX10-NUP98 fusion prot...    30   4.9  
U20158-1|AAC50135.1|  533|Homo sapiens SLP-76 protein.                 29   8.6  
BT007273-1|AAP35937.1|  533|Homo sapiens lymphocyte cytosolic pr...    29   8.6  
BC016618-1|AAH16618.1|  533|Homo sapiens lymphocyte cytosolic pr...    29   8.6  
AF182077-1|AAF62874.1| 1509|Homo sapiens glioma tumor suppressor...    29   8.6  

>BC011047-1|AAH11047.1|  681|Homo sapiens growth arrest-specific 2
           like 1 protein.
          Length = 681

 Score = 31.5 bits (68), Expect = 2.1
 Identities = 19/61 (31%), Positives = 30/61 (49%)
 Frame = +1

Query: 226 ELSCESARASVTGPTTTAAPHSTLQRLPRQRQVSYPSDSVQAAGRASLCGRRAIWIHSGA 405
           E++  S R++  GP T   P   L   PR R+ S  SDS  ++ ++   G R+    +G 
Sbjct: 319 EMTPVSLRSTKEGPETPPRPRDQLPPHPRSRRYSGDSDSSASSAQSGPLGTRSDDTGTGP 378

Query: 406 R 408
           R
Sbjct: 379 R 379


>BC007624-1|AAH07624.1|  681|Homo sapiens growth arrest-specific 2
           like 1 protein.
          Length = 681

 Score = 31.5 bits (68), Expect = 2.1
 Identities = 19/61 (31%), Positives = 30/61 (49%)
 Frame = +1

Query: 226 ELSCESARASVTGPTTTAAPHSTLQRLPRQRQVSYPSDSVQAAGRASLCGRRAIWIHSGA 405
           E++  S R++  GP T   P   L   PR R+ S  SDS  ++ ++   G R+    +G 
Sbjct: 319 EMTPVSLRSTKEGPETPPRPRDQLPPHPRSRRYSGDSDSSASSAQSGPLGTRSDDTGTGP 378

Query: 406 R 408
           R
Sbjct: 379 R 379


>BC001782-1|AAH01782.1|  681|Homo sapiens growth arrest-specific 2
           like 1 protein.
          Length = 681

 Score = 31.5 bits (68), Expect = 2.1
 Identities = 19/61 (31%), Positives = 30/61 (49%)
 Frame = +1

Query: 226 ELSCESARASVTGPTTTAAPHSTLQRLPRQRQVSYPSDSVQAAGRASLCGRRAIWIHSGA 405
           E++  S R++  GP T   P   L   PR R+ S  SDS  ++ ++   G R+    +G 
Sbjct: 319 EMTPVSLRSTKEGPETPPRPRDQLPPHPRSRRYSGDSDSSASSAQSGPLGTRSDDTGTGP 378

Query: 406 R 408
           R
Sbjct: 379 R 379


>AK223602-1|BAD97322.1|  681|Homo sapiens growth arrest-specific 2
           like 1 isoform a variant protein.
          Length = 681

 Score = 31.5 bits (68), Expect = 2.1
 Identities = 19/61 (31%), Positives = 30/61 (49%)
 Frame = +1

Query: 226 ELSCESARASVTGPTTTAAPHSTLQRLPRQRQVSYPSDSVQAAGRASLCGRRAIWIHSGA 405
           E++  S R++  GP T   P   L   PR R+ S  SDS  ++ ++   G R+    +G 
Sbjct: 319 EMTPVSLRSTKEGPETPPRPRDQLPPHPRSRRYSGDSDSSASSAQSGPLGTRSDDTGTGP 378

Query: 406 R 408
           R
Sbjct: 379 R 379


>AK093386-1|BAC04150.1|  681|Homo sapiens protein ( Homo sapiens
           cDNA FLJ36067 fis, clone TESTI2019308, highly similar to
           GAR22 PROTEIN. ).
          Length = 681

 Score = 31.5 bits (68), Expect = 2.1
 Identities = 19/61 (31%), Positives = 30/61 (49%)
 Frame = +1

Query: 226 ELSCESARASVTGPTTTAAPHSTLQRLPRQRQVSYPSDSVQAAGRASLCGRRAIWIHSGA 405
           E++  S R++  GP T   P   L   PR R+ S  SDS  ++ ++   G R+    +G 
Sbjct: 319 EMTPVSLRSTKEGPETPPRPRDQLPPHPRSRRYSGDSDSSASSAQSGPLGTRSDDTGTGP 378

Query: 406 R 408
           R
Sbjct: 379 R 379


>AB001343-1|BAA20386.1|  111|Homo sapiens DDX10-NUP98 fusion protein
           type 2 protein.
          Length = 111

 Score = 30.3 bits (65), Expect = 4.9
 Identities = 18/71 (25%), Positives = 37/71 (52%), Gaps = 4/71 (5%)
 Frame = +1

Query: 286 HSTLQRLPRQRQV----SYPSDSVQAAGRASLCGRRAIWIHSGARYKATVAYDSVRKLIR 453
           ++ ++ LP++RQ     +  + SV+   R SL     +W+H  A+Y+      S++KL+ 
Sbjct: 46  NAVIENLPKKRQTLLFSATQTKSVKDLARLSLKNPEYVWVHEKAKYR-----KSIKKLVL 100

Query: 454 RT*RSLVQFAP 486
           +   +   F+P
Sbjct: 101 KNLNNSNLFSP 111


>U20158-1|AAC50135.1|  533|Homo sapiens SLP-76 protein.
          Length = 533

 Score = 29.5 bits (63), Expect = 8.6
 Identities = 16/35 (45%), Positives = 18/35 (51%)
 Frame = -2

Query: 405 STGVDPYRSPPAERRPPSGLNAIGRITDLPLPRKP 301
           S  + PY S     RPP  + A GR   LPLP KP
Sbjct: 374 SASLPPYFSQGPSNRPP--IRAEGRNFPLPLPNKP 406


>BT007273-1|AAP35937.1|  533|Homo sapiens lymphocyte cytosolic
           protein 2 (SH2 domain containing leukocyte protein of
           76kD protein.
          Length = 533

 Score = 29.5 bits (63), Expect = 8.6
 Identities = 16/35 (45%), Positives = 18/35 (51%)
 Frame = -2

Query: 405 STGVDPYRSPPAERRPPSGLNAIGRITDLPLPRKP 301
           S  + PY S     RPP  + A GR   LPLP KP
Sbjct: 374 SASLPPYFSQGPSNRPP--IRAEGRNFPLPLPNKP 406


>BC016618-1|AAH16618.1|  533|Homo sapiens lymphocyte cytosolic
           protein 2 (SH2 domain containing leukocyte protein of
           76kD protein.
          Length = 533

 Score = 29.5 bits (63), Expect = 8.6
 Identities = 16/35 (45%), Positives = 18/35 (51%)
 Frame = -2

Query: 405 STGVDPYRSPPAERRPPSGLNAIGRITDLPLPRKP 301
           S  + PY S     RPP  + A GR   LPLP KP
Sbjct: 374 SASLPPYFSQGPSNRPP--IRAEGRNFPLPLPNKP 406


>AF182077-1|AAF62874.1| 1509|Homo sapiens glioma tumor suppressor
            candidate region protein 1 protein.
          Length = 1509

 Score = 29.5 bits (63), Expect = 8.6
 Identities = 14/42 (33%), Positives = 22/42 (52%)
 Frame = +2

Query: 305  FLGNGKSVIRPIAFKPLGGRLSAGGERYGSTPVLATRPPSHM 430
            ++ + +S+  PIA    G RL   G    S P  +T+PP H+
Sbjct: 1150 YVSSSRSLGLPIAASSEGHRLPGHGPLSSSAPGASTQPPPHL 1191


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 77,664,878
Number of Sequences: 237096
Number of extensions: 1539500
Number of successful extensions: 4767
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 4452
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4762
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5759818212
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)