Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte18h16
         (404 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein...    23   1.7  
AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein...    23   1.7  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    21   4.0  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    21   4.0  
S76957-1|AAB33932.1|  169|Apis mellifera olfactory receptor prot...    21   5.3  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    21   7.0  
S76956-1|AAB33931.1|  168|Apis mellifera olfactory receptor prot...    20   9.3  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             20   9.3  

>AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 22.6 bits (46), Expect = 1.7
 Identities = 6/16 (37%), Positives = 13/16 (81%)
 Frame = +3

Query: 72  VINSKARIRCKVEKQG 119
           ++ ++ R+ CK+E+QG
Sbjct: 210 ILEAEKRVECKMEQQG 225


>AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 22.6 bits (46), Expect = 1.7
 Identities = 6/16 (37%), Positives = 13/16 (81%)
 Frame = +3

Query: 72  VINSKARIRCKVEKQG 119
           ++ ++ R+ CK+E+QG
Sbjct: 210 ILEAEKRVECKMEQQG 225


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
            AbsCAM-Ig7B protein.
          Length = 1923

 Score = 21.4 bits (43), Expect = 4.0
 Identities = 12/53 (22%), Positives = 24/53 (45%)
 Frame = -1

Query: 290  SPDSLEARLPASARPKITGASTASAKTLPSSDVTPSTTRTHSTISFCSTLQNV 132
            S D +E R  ++    +TG    +  T+     T       +T+++C T ++V
Sbjct: 1161 SVDEMEVRKTSALTTVLTGLRKYTNYTIQVLAFTRVGDGVPTTVTYCQTEEDV 1213


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
            AbsCAM-Ig7A protein.
          Length = 1919

 Score = 21.4 bits (43), Expect = 4.0
 Identities = 12/53 (22%), Positives = 24/53 (45%)
 Frame = -1

Query: 290  SPDSLEARLPASARPKITGASTASAKTLPSSDVTPSTTRTHSTISFCSTLQNV 132
            S D +E R  ++    +TG    +  T+     T       +T+++C T ++V
Sbjct: 1157 SVDEMEVRKTSALTTVLTGLRKYTNYTIQVLAFTRVGDGVPTTVTYCQTEEDV 1209


>S76957-1|AAB33932.1|  169|Apis mellifera olfactory receptor
           protein.
          Length = 169

 Score = 21.0 bits (42), Expect = 5.3
 Identities = 9/31 (29%), Positives = 15/31 (48%)
 Frame = -1

Query: 179 TRTHSTISFCSTLQNVHSVLSLLFDLAPDSS 87
           T TH+T +FC      + +     D++P  S
Sbjct: 36  TMTHTTNAFCLPFCGPNVINPFFCDMSPSLS 66


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
           protein.
          Length = 1770

 Score = 20.6 bits (41), Expect = 7.0
 Identities = 9/28 (32%), Positives = 16/28 (57%)
 Frame = -1

Query: 158 SFCSTLQNVHSVLSLLFDLAPDSSFTVN 75
           SF +   +V     +L+D+AP S F ++
Sbjct: 166 SFKAMEDSVGGKCEVLYDIAPLSDFVIH 193


>S76956-1|AAB33931.1|  168|Apis mellifera olfactory receptor
           protein.
          Length = 168

 Score = 20.2 bits (40), Expect = 9.3
 Identities = 8/28 (28%), Positives = 14/28 (50%)
 Frame = -1

Query: 179 TRTHSTISFCSTLQNVHSVLSLLFDLAP 96
           T TH+T +FC      + +     D++P
Sbjct: 35  TMTHTTNAFCLPFCGPNVINPFFCDMSP 62


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 20.2 bits (40), Expect = 9.3
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = -1

Query: 347 AGGDSLRVRLRGGR 306
           +GGDSLR  L+ G+
Sbjct: 733 SGGDSLRTLLQRGQ 746



 Score = 20.2 bits (40), Expect = 9.3
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = -2

Query: 178  PALTQPSPFVR 146
            P +T PSPF R
Sbjct: 984  PIMTDPSPFKR 994


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 99,607
Number of Sequences: 438
Number of extensions: 1615
Number of successful extensions: 9
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 10132494
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)