Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte18h09
         (528 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT016059-1|AAV36944.1| 1691|Drosophila melanogaster LP14319p pro...    31   1.3  
AY853687-1|AAX12107.1| 1706|Drosophila melanogaster cadherin 99C...    31   1.3  
AY853686-1|AAX12106.1| 1706|Drosophila melanogaster cadherin 99C...    31   1.3  
AE014297-4457|AAF56955.2| 1706|Drosophila melanogaster CG31009-P...    31   1.3  
BT003453-1|AAO39456.1|  490|Drosophila melanogaster RH40480p pro...    28   9.0  
AE014296-1068|AAF50697.2|  490|Drosophila melanogaster CG7018-PA...    28   9.0  

>BT016059-1|AAV36944.1| 1691|Drosophila melanogaster LP14319p
           protein.
          Length = 1691

 Score = 30.7 bits (66), Expect = 1.3
 Identities = 16/59 (27%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
 Frame = +1

Query: 220 DSSPYNILNRITS-DCESSPSASITFSSRMISLLSQQSDLYNSIRGSVQNQSRDLGGQE 393
           D S   ++ ++T+ D +  P+A +T+S   +S    Q    N+  G ++ Q R L G++
Sbjct: 497 DQSESRLVTQVTATDNDEGPNAVVTYSIYHVSNNGIQKFTINATTGEIRTQGRLLAGEQ 555


>AY853687-1|AAX12107.1| 1706|Drosophila melanogaster cadherin 99C
           protein.
          Length = 1706

 Score = 30.7 bits (66), Expect = 1.3
 Identities = 16/59 (27%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
 Frame = +1

Query: 220 DSSPYNILNRITS-DCESSPSASITFSSRMISLLSQQSDLYNSIRGSVQNQSRDLGGQE 393
           D S   ++ ++T+ D +  P+A +T+S   +S    Q    N+  G ++ Q R L G++
Sbjct: 512 DQSESRLVTQVTATDNDEGPNAVVTYSIYHVSNNGIQKFTINATTGEIRTQGRLLAGEQ 570


>AY853686-1|AAX12106.1| 1706|Drosophila melanogaster cadherin 99C
           protein.
          Length = 1706

 Score = 30.7 bits (66), Expect = 1.3
 Identities = 16/59 (27%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
 Frame = +1

Query: 220 DSSPYNILNRITS-DCESSPSASITFSSRMISLLSQQSDLYNSIRGSVQNQSRDLGGQE 393
           D S   ++ ++T+ D +  P+A +T+S   +S    Q    N+  G ++ Q R L G++
Sbjct: 512 DQSESRLVTQVTATDNDEGPNAVVTYSIYHVSNNGIQKFTINATTGEIRTQGRLLAGEQ 570


>AE014297-4457|AAF56955.2| 1706|Drosophila melanogaster CG31009-PA
           protein.
          Length = 1706

 Score = 30.7 bits (66), Expect = 1.3
 Identities = 16/59 (27%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
 Frame = +1

Query: 220 DSSPYNILNRITS-DCESSPSASITFSSRMISLLSQQSDLYNSIRGSVQNQSRDLGGQE 393
           D S   ++ ++T+ D +  P+A +T+S   +S    Q    N+  G ++ Q R L G++
Sbjct: 512 DQSESRLVTQVTATDNDEGPNAVVTYSIYHVSNNGIQKFTINATTGEIRTQGRLLAGEQ 570


>BT003453-1|AAO39456.1|  490|Drosophila melanogaster RH40480p
           protein.
          Length = 490

 Score = 27.9 bits (59), Expect = 9.0
 Identities = 22/80 (27%), Positives = 34/80 (42%)
 Frame = +1

Query: 94  LMQKVETSWRKDGDWKGRYSSLYSARRVSLPKEEPHRISFLTDSSPYNILNRITSDCESS 273
           L    ++SW   G      S  YS+  + + K +PH  S L    PY +    +S   SS
Sbjct: 259 LYSSYKSSW---GSHSSTQSQGYSSNALGI-KHDPH--SQLRQPDPYQMFGPTSSRLASS 312

Query: 274 PSASITFSSRMISLLSQQSD 333
            S  I     ++ LLS  ++
Sbjct: 313 GSGQIQLWQFLLELLSDSNN 332


>AE014296-1068|AAF50697.2|  490|Drosophila melanogaster CG7018-PA,
           isoform A protein.
          Length = 490

 Score = 27.9 bits (59), Expect = 9.0
 Identities = 22/80 (27%), Positives = 34/80 (42%)
 Frame = +1

Query: 94  LMQKVETSWRKDGDWKGRYSSLYSARRVSLPKEEPHRISFLTDSSPYNILNRITSDCESS 273
           L    ++SW   G      S  YS+  + + K +PH  S L    PY +    +S   SS
Sbjct: 259 LYSSYKSSW---GSHSSTQSQGYSSNALGI-KHDPH--SQLRQPDPYQMFGPTSSRLASS 312

Query: 274 PSASITFSSRMISLLSQQSD 333
            S  I     ++ LLS  ++
Sbjct: 313 GSGQIQLWQFLLELLSDSNN 332


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,155,291
Number of Sequences: 53049
Number of extensions: 376656
Number of successful extensions: 869
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 852
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 869
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1970722560
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)