Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte18h07
         (596 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M35617-1|AAA60655.1|  131|Homo sapiens protein ( Human T-cell re...    30   5.4  
BX538178-1|CAD98052.1| 1175|Homo sapiens hypothetical protein pr...    30   7.2  
BX538177-1|CAD98051.1| 1175|Homo sapiens hypothetical protein pr...    30   7.2  
BC146821-1|AAI46822.1| 1176|Homo sapiens Unknown (protein for IM...    30   7.2  
AK126804-1|BAC86701.1|  969|Homo sapiens protein ( Homo sapiens ...    30   7.2  
AJ640137-1|CAG26691.1| 2697|Homo sapiens delangin protein.             30   7.2  
AJ627032-1|CAF25290.1| 2804|Homo sapiens delangin protein.             30   7.2  
AB019602-1|BAA77349.1| 2158|Homo sapiens IDN3-B protein.               30   7.2  
AB019494-1|BAA77335.1| 2265|Homo sapiens IDN3 protein.                 30   7.2  

>M35617-1|AAA60655.1|  131|Homo sapiens protein ( Human T-cell
           receptor productively rearranged V-alpha-J-alpha DNA,
           exons 1 and 2. ).
          Length = 131

 Score = 30.3 bits (65), Expect = 5.4
 Identities = 15/46 (32%), Positives = 24/46 (52%)
 Frame = -3

Query: 225 DAIVDQIKGGKFQLKSTDQNFLERKPKDDQPEAVKEMLAILGTLRK 88
           D +V  IKG + + K +  +F  RKP     +A +   A++GT  K
Sbjct: 73  DTLVQGIKGFEAEFKRSQSSFNLRKPSVHWSDAAEYFCAVVGTASK 118


>BX538178-1|CAD98052.1| 1175|Homo sapiens hypothetical protein
           protein.
          Length = 1175

 Score = 29.9 bits (64), Expect = 7.2
 Identities = 12/36 (33%), Positives = 19/36 (52%)
 Frame = -2

Query: 178 NRPELPRAKTQRRPARSCQGNAGHPRNAEEETQREP 71
           +RPE P+ K + RP    Q + GHP   +++    P
Sbjct: 698 SRPETPKQKGESRPETPKQKSDGHPETPKQKGDGRP 733


>BX538177-1|CAD98051.1| 1175|Homo sapiens hypothetical protein
           protein.
          Length = 1175

 Score = 29.9 bits (64), Expect = 7.2
 Identities = 12/36 (33%), Positives = 19/36 (52%)
 Frame = -2

Query: 178 NRPELPRAKTQRRPARSCQGNAGHPRNAEEETQREP 71
           +RPE P+ K + RP    Q + GHP   +++    P
Sbjct: 698 SRPETPKQKGESRPETPKQKSDGHPETPKQKGDGRP 733


>BC146821-1|AAI46822.1| 1176|Homo sapiens Unknown (protein for
           IMAGE:8860431) protein.
          Length = 1176

 Score = 29.9 bits (64), Expect = 7.2
 Identities = 12/36 (33%), Positives = 19/36 (52%)
 Frame = -2

Query: 178 NRPELPRAKTQRRPARSCQGNAGHPRNAEEETQREP 71
           +RPE P+ K + RP    Q + GHP   +++    P
Sbjct: 698 SRPETPKQKGESRPETPKQKSDGHPETPKQKGDGRP 733


>AK126804-1|BAC86701.1|  969|Homo sapiens protein ( Homo sapiens
           cDNA FLJ44854 fis, clone BRACE3052410, highly  similar
           to Homo sapiens IDN3 protein (IDN3). ).
          Length = 969

 Score = 29.9 bits (64), Expect = 7.2
 Identities = 12/36 (33%), Positives = 19/36 (52%)
 Frame = -2

Query: 178 NRPELPRAKTQRRPARSCQGNAGHPRNAEEETQREP 71
           +RPE P+ K + RP    Q + GHP   +++    P
Sbjct: 566 SRPETPKQKGESRPETPKQKSDGHPETPKQKGDGRP 601


>AJ640137-1|CAG26691.1| 2697|Homo sapiens delangin protein.
          Length = 2697

 Score = 29.9 bits (64), Expect = 7.2
 Identities = 12/36 (33%), Positives = 19/36 (52%)
 Frame = -2

Query: 178 NRPELPRAKTQRRPARSCQGNAGHPRNAEEETQREP 71
           +RPE P+ K + RP    Q + GHP   +++    P
Sbjct: 698 SRPETPKQKGESRPETPKQKSDGHPETPKQKGDGRP 733


>AJ627032-1|CAF25290.1| 2804|Homo sapiens delangin protein.
          Length = 2804

 Score = 29.9 bits (64), Expect = 7.2
 Identities = 12/36 (33%), Positives = 19/36 (52%)
 Frame = -2

Query: 178 NRPELPRAKTQRRPARSCQGNAGHPRNAEEETQREP 71
           +RPE P+ K + RP    Q + GHP   +++    P
Sbjct: 698 SRPETPKQKGESRPETPKQKSDGHPETPKQKGDGRP 733


>AB019602-1|BAA77349.1| 2158|Homo sapiens IDN3-B protein.
          Length = 2158

 Score = 29.9 bits (64), Expect = 7.2
 Identities = 12/36 (33%), Positives = 19/36 (52%)
 Frame = -2

Query: 178 NRPELPRAKTQRRPARSCQGNAGHPRNAEEETQREP 71
           +RPE P+ K + RP    Q + GHP   +++    P
Sbjct: 159 SRPETPKQKGESRPETPKQKSDGHPETPKQKGDGRP 194


>AB019494-1|BAA77335.1| 2265|Homo sapiens IDN3 protein.
          Length = 2265

 Score = 29.9 bits (64), Expect = 7.2
 Identities = 12/36 (33%), Positives = 19/36 (52%)
 Frame = -2

Query: 178 NRPELPRAKTQRRPARSCQGNAGHPRNAEEETQREP 71
           +RPE P+ K + RP    Q + GHP   +++    P
Sbjct: 159 SRPETPKQKGESRPETPKQKSDGHPETPKQKGDGRP 194


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 82,831,215
Number of Sequences: 237096
Number of extensions: 1863882
Number of successful extensions: 4174
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 3967
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4169
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 6324506272
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)