Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte18h07
(596 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF039720-1|AAB96694.1| 437|Caenorhabditis elegans Hypothetical ... 30 1.1
Z83230-10|CAL22704.2| 714|Caenorhabditis elegans Hypothetical p... 29 1.9
AL021481-9|CAA16332.3| 714|Caenorhabditis elegans Hypothetical ... 29 1.9
U56963-2|AAB38119.2| 326|Caenorhabditis elegans Neuropeptide-li... 29 3.3
Z79696-1|CAB01972.1| 1584|Caenorhabditis elegans Hypothetical pr... 28 5.8
Z81017-3|CAB54257.1| 629|Caenorhabditis elegans Hypothetical pr... 27 7.7
Z81017-2|CAB02672.1| 578|Caenorhabditis elegans Hypothetical pr... 27 7.7
Z81017-1|CAB02669.1| 592|Caenorhabditis elegans Hypothetical pr... 27 7.7
U80221-1|AAB38367.1| 579|Caenorhabditis elegans F58A3.1b protein. 27 7.7
U80220-1|AAB38366.1| 592|Caenorhabditis elegans F58A3.1a protein. 27 7.7
>AF039720-1|AAB96694.1| 437|Caenorhabditis elegans Hypothetical
protein F33D11.5 protein.
Length = 437
Score = 30.3 bits (65), Expect = 1.1
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = -3
Query: 168 NFLERKPKDDQPEAVKEMLAILGTLRKR 85
NF R+PK+ VKE+L I+ +RKR
Sbjct: 293 NFKRRQPKEQMDVQVKELLKIIEEIRKR 320
>Z83230-10|CAL22704.2| 714|Caenorhabditis elegans Hypothetical
protein Y43F4B.3 protein.
Length = 714
Score = 29.5 bits (63), Expect = 1.9
Identities = 14/46 (30%), Positives = 24/46 (52%)
Frame = -2
Query: 280 NDVSEIINPCTFSARWRNRRYSGPNQRREIPIKVNRPELPRAKTQR 143
++ E I P + ++ N Y G +RR ++ +PE P +TQR
Sbjct: 33 DEKKENIPPISLTSVSTNGAYPGQKRRRSESVRTLKPECPPEETQR 78
>AL021481-9|CAA16332.3| 714|Caenorhabditis elegans Hypothetical
protein Y43F4B.3 protein.
Length = 714
Score = 29.5 bits (63), Expect = 1.9
Identities = 14/46 (30%), Positives = 24/46 (52%)
Frame = -2
Query: 280 NDVSEIINPCTFSARWRNRRYSGPNQRREIPIKVNRPELPRAKTQR 143
++ E I P + ++ N Y G +RR ++ +PE P +TQR
Sbjct: 33 DEKKENIPPISLTSVSTNGAYPGQKRRRSESVRTLKPECPPEETQR 78
>U56963-2|AAB38119.2| 326|Caenorhabditis elegans Neuropeptide-like
protein protein16 protein.
Length = 326
Score = 28.7 bits (61), Expect = 3.3
Identities = 18/47 (38%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Frame = -3
Query: 204 KGGKFQLKSTDQNFLERKPKDD-QPEAVKEMLAILGTLRKRRNVNRP 67
+GG +STDQ E +P+D+ Q + E+ G+ RKRRN + P
Sbjct: 218 EGGHRHHRSTDQGLDEDEPEDEIQTDENDEVTEEPGS-RKRRNTDTP 263
>Z79696-1|CAB01972.1| 1584|Caenorhabditis elegans Hypothetical
protein F54F3.1 protein.
Length = 1584
Score = 27.9 bits (59), Expect = 5.8
Identities = 14/66 (21%), Positives = 29/66 (43%)
Frame = -2
Query: 310 TVSDIHNIRHNDVSEIINPCTFSARWRNRRYSGPNQRREIPIKVNRPELPRAKTQRRPAR 131
TV D + D + P + ++++ P+Q ++ P + LP+ +R +
Sbjct: 307 TVEDDEDDEQVDGTRYEEPARQAQEQHHQQHHQPDQPQQQPQRSQEGSLPKMSCSQRDDK 366
Query: 130 SCQGNA 113
SC N+
Sbjct: 367 SCHANS 372
>Z81017-3|CAB54257.1| 629|Caenorhabditis elegans Hypothetical
protein F58A3.1c protein.
Length = 629
Score = 27.5 bits (58), Expect = 7.7
Identities = 24/92 (26%), Positives = 41/92 (44%), Gaps = 11/92 (11%)
Frame = -2
Query: 358 PSLGY-RAAFSLATKLMTVSDIHNIRHNDVS-------EIINPCTFS---ARWRNRRYSG 212
P +G+ ++ F+L T L + + +I + S E++ F R +N R
Sbjct: 275 PRMGFFKSTFNLMTMLKILDPMQSIMSSAKSAPAITPREVMKRTLFQHHQVRQQNMRQQQ 334
Query: 211 PNQRREIPIKVNRPELPRAKTQRRPARSCQGN 116
NQ+ IP P K QR+PA + +G+
Sbjct: 335 LNQQMMIPAPEPEKPKPARKRQRKPAANPRGS 366
>Z81017-2|CAB02672.1| 578|Caenorhabditis elegans Hypothetical
protein F58A3.1b protein.
Length = 578
Score = 27.5 bits (58), Expect = 7.7
Identities = 24/92 (26%), Positives = 41/92 (44%), Gaps = 11/92 (11%)
Frame = -2
Query: 358 PSLGY-RAAFSLATKLMTVSDIHNIRHNDVS-------EIINPCTFS---ARWRNRRYSG 212
P +G+ ++ F+L T L + + +I + S E++ F R +N R
Sbjct: 224 PRMGFFKSTFNLMTMLKILDPMQSIMSSAKSAPAITPREVMKRTLFQHHQVRQQNMRQQQ 283
Query: 211 PNQRREIPIKVNRPELPRAKTQRRPARSCQGN 116
NQ+ IP P K QR+PA + +G+
Sbjct: 284 LNQQMMIPAPEPEKPKPARKRQRKPAANPRGS 315
>Z81017-1|CAB02669.1| 592|Caenorhabditis elegans Hypothetical
protein F58A3.1a protein.
Length = 592
Score = 27.5 bits (58), Expect = 7.7
Identities = 24/92 (26%), Positives = 41/92 (44%), Gaps = 11/92 (11%)
Frame = -2
Query: 358 PSLGY-RAAFSLATKLMTVSDIHNIRHNDVS-------EIINPCTFS---ARWRNRRYSG 212
P +G+ ++ F+L T L + + +I + S E++ F R +N R
Sbjct: 238 PRMGFFKSTFNLMTMLKILDPMQSIMSSAKSAPAITPREVMKRTLFQHHQVRQQNMRQQQ 297
Query: 211 PNQRREIPIKVNRPELPRAKTQRRPARSCQGN 116
NQ+ IP P K QR+PA + +G+
Sbjct: 298 LNQQMMIPAPEPEKPKPARKRQRKPAANPRGS 329
>U80221-1|AAB38367.1| 579|Caenorhabditis elegans F58A3.1b protein.
Length = 579
Score = 27.5 bits (58), Expect = 7.7
Identities = 24/92 (26%), Positives = 41/92 (44%), Gaps = 11/92 (11%)
Frame = -2
Query: 358 PSLGY-RAAFSLATKLMTVSDIHNIRHNDVS-------EIINPCTFS---ARWRNRRYSG 212
P +G+ ++ F+L T L + + +I + S E++ F R +N R
Sbjct: 225 PRMGFFKSTFNLMTMLKILDPMQSIMSSAKSAPAITPREVMKRTLFQHHQVRQQNMRQQQ 284
Query: 211 PNQRREIPIKVNRPELPRAKTQRRPARSCQGN 116
NQ+ IP P K QR+PA + +G+
Sbjct: 285 LNQQMMIPAPEPEKPKPARKRQRKPAANPRGS 316
>U80220-1|AAB38366.1| 592|Caenorhabditis elegans F58A3.1a protein.
Length = 592
Score = 27.5 bits (58), Expect = 7.7
Identities = 24/92 (26%), Positives = 41/92 (44%), Gaps = 11/92 (11%)
Frame = -2
Query: 358 PSLGY-RAAFSLATKLMTVSDIHNIRHNDVS-------EIINPCTFS---ARWRNRRYSG 212
P +G+ ++ F+L T L + + +I + S E++ F R +N R
Sbjct: 238 PRMGFFKSTFNLMTMLKILDPMQSIMSSAKSAPAITPREVMKRTLFQHHQVRQQNMRQQQ 297
Query: 211 PNQRREIPIKVNRPELPRAKTQRRPARSCQGN 116
NQ+ IP P K QR+PA + +G+
Sbjct: 298 LNQQMMIPAPEPEKPKPARKRQRKPAANPRGS 329
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,204,511
Number of Sequences: 27780
Number of extensions: 272031
Number of successful extensions: 779
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 700
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 779
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1268802960
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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