Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte18h04
(585 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U97189-1|AAC48164.1| 623|Caenorhabditis elegans Hypothetical pr... 31 0.80
U49829-6|AAA93387.1| 498|Caenorhabditis elegans Hypothetical pr... 28 5.6
Z73103-14|CAL22701.1| 387|Caenorhabditis elegans Hypothetical p... 27 7.4
Z73103-13|CAA97430.1| 340|Caenorhabditis elegans Hypothetical p... 27 7.4
Z68341-7|CAL22703.1| 387|Caenorhabditis elegans Hypothetical pr... 27 7.4
Z68341-6|CAA92769.1| 340|Caenorhabditis elegans Hypothetical pr... 27 7.4
X76113-1|CAA53719.1| 340|Caenorhabditis elegans phosphate carri... 27 7.4
Z73105-4|CAA97443.2| 1406|Caenorhabditis elegans Hypothetical pr... 27 9.8
Z69384-10|CAA93420.2| 1406|Caenorhabditis elegans Hypothetical p... 27 9.8
U58761-6|AAB00716.1| 312|Caenorhabditis elegans Hypothetical pr... 27 9.8
>U97189-1|AAC48164.1| 623|Caenorhabditis elegans Hypothetical
protein C48B6.4 protein.
Length = 623
Score = 30.7 bits (66), Expect = 0.80
Identities = 10/28 (35%), Positives = 20/28 (71%)
Frame = +2
Query: 407 LIECKLNGNGLDIYVIDPNITRTNEFFS 490
++E +NG+GL+ + P+ TRT +F++
Sbjct: 236 MVESSINGHGLEFECLGPDATRTQDFWT 263
>U49829-6|AAA93387.1| 498|Caenorhabditis elegans Hypothetical
protein F27D9.2 protein.
Length = 498
Score = 27.9 bits (59), Expect = 5.6
Identities = 11/25 (44%), Positives = 18/25 (72%)
Frame = -1
Query: 513 RVPQKRSPLKNSFVLVIFGSMTYMS 439
R+ Q R PL F+++ FG++TY+S
Sbjct: 103 RIGQVRFPLIVGFIVMAFGNITYLS 127
>Z73103-14|CAL22701.1| 387|Caenorhabditis elegans Hypothetical
protein F01G4.6b protein.
Length = 387
Score = 27.5 bits (58), Expect = 7.4
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = -1
Query: 249 WAHNLLDGYLLKGLGSVGDEGLFKNTTASL 160
WA LL GY +GLG G +FKN A +
Sbjct: 148 WAPTLL-GYSAQGLGKFGFYEIFKNVYADM 176
>Z73103-13|CAA97430.1| 340|Caenorhabditis elegans Hypothetical
protein F01G4.6a protein.
Length = 340
Score = 27.5 bits (58), Expect = 7.4
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = -1
Query: 249 WAHNLLDGYLLKGLGSVGDEGLFKNTTASL 160
WA LL GY +GLG G +FKN A +
Sbjct: 101 WAPTLL-GYSAQGLGKFGFYEIFKNVYADM 129
>Z68341-7|CAL22703.1| 387|Caenorhabditis elegans Hypothetical
protein F01G4.6b protein.
Length = 387
Score = 27.5 bits (58), Expect = 7.4
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = -1
Query: 249 WAHNLLDGYLLKGLGSVGDEGLFKNTTASL 160
WA LL GY +GLG G +FKN A +
Sbjct: 148 WAPTLL-GYSAQGLGKFGFYEIFKNVYADM 176
>Z68341-6|CAA92769.1| 340|Caenorhabditis elegans Hypothetical
protein F01G4.6a protein.
Length = 340
Score = 27.5 bits (58), Expect = 7.4
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = -1
Query: 249 WAHNLLDGYLLKGLGSVGDEGLFKNTTASL 160
WA LL GY +GLG G +FKN A +
Sbjct: 101 WAPTLL-GYSAQGLGKFGFYEIFKNVYADM 129
>X76113-1|CAA53719.1| 340|Caenorhabditis elegans phosphate carrier
protein protein.
Length = 340
Score = 27.5 bits (58), Expect = 7.4
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = -1
Query: 249 WAHNLLDGYLLKGLGSVGDEGLFKNTTASL 160
WA LL GY +GLG G +FKN A +
Sbjct: 101 WAPTLL-GYSAQGLGKFGFYEIFKNVYADM 129
>Z73105-4|CAA97443.2| 1406|Caenorhabditis elegans Hypothetical
protein T11G6.5 protein.
Length = 1406
Score = 27.1 bits (57), Expect = 9.8
Identities = 16/48 (33%), Positives = 23/48 (47%), Gaps = 3/48 (6%)
Frame = +2
Query: 161 NEAVVFLNSPSSPTE---PNPFKR*PSNRLWAQNKFKSDRPVLHWNRP 295
+ A + N P SPT+ P P P + L + F S +PV +N P
Sbjct: 614 HSASISTNIPGSPTQFNRPPPVLHSPRSALPSAGPFSSPQPVPRFNGP 661
>Z69384-10|CAA93420.2| 1406|Caenorhabditis elegans Hypothetical
protein T11G6.5 protein.
Length = 1406
Score = 27.1 bits (57), Expect = 9.8
Identities = 16/48 (33%), Positives = 23/48 (47%), Gaps = 3/48 (6%)
Frame = +2
Query: 161 NEAVVFLNSPSSPTE---PNPFKR*PSNRLWAQNKFKSDRPVLHWNRP 295
+ A + N P SPT+ P P P + L + F S +PV +N P
Sbjct: 614 HSASISTNIPGSPTQFNRPPPVLHSPRSALPSAGPFSSPQPVPRFNGP 661
>U58761-6|AAB00716.1| 312|Caenorhabditis elegans Hypothetical
protein C01F1.2 protein.
Length = 312
Score = 27.1 bits (57), Expect = 9.8
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +1
Query: 286 EPTVDYYKVEFRRPIRQIRHDTLSLTRYKSVLGTY 390
EP VD + FR+ Q S+ +K+VLGT+
Sbjct: 69 EPPVDKNFMNFRKQAEQEAFQRSSIFNWKTVLGTF 103
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,407,325
Number of Sequences: 27780
Number of extensions: 285751
Number of successful extensions: 677
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 667
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 677
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1226509528
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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