Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte18g22
(592 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Y15572-1|CAA75681.1| 328|Homo sapiens R51H3 protein. 94 3e-19
BC014422-1|AAH14422.1| 328|Homo sapiens RAD51-like 3 (S. cerevi... 94 3e-19
AY623116-1|AAT38112.1| 328|Homo sapiens RAD51-like 3 (S. cerevi... 94 3e-19
AB013341-1|BAA25914.1| 328|Homo sapiens Trad protein. 94 3e-19
AB018360-1|BAA33779.1| 95|Homo sapiens TRAD-d4 protein. 59 1e-08
AF034956-1|AAC39719.1| 289|Homo sapiens RAD51D protein. 50 5e-06
BC107753-1|AAI07754.1| 376|Homo sapiens RAD51 homolog C (S. cer... 48 3e-05
AY623112-1|AAT38108.1| 376|Homo sapiens RAD51 homolog C (S. cer... 48 3e-05
AF029669-1|AAC39604.1| 376|Homo sapiens Rad51C protein. 48 3e-05
BT019705-1|AAV38511.1| 339|Homo sapiens RAD51 homolog (RecA hom... 47 6e-05
D14134-1|BAA03189.1| 339|Homo sapiens RAD51 protein. 46 1e-04
D13804-1|BAA02962.1| 339|Homo sapiens HsRad51 protein. 46 1e-04
CR536559-1|CAG38796.1| 339|Homo sapiens RAD51 protein. 46 1e-04
AY196785-1|AAN87149.1| 339|Homo sapiens RAD51 homolog (RecA hom... 46 1e-04
AF233744-1|AAF69145.1| 339|Homo sapiens RAD51 protein. 46 1e-04
AF165094-1|AAD49705.1| 339|Homo sapiens Rad51 protein. 46 1e-04
Y15571-1|CAA75680.1| 350|Homo sapiens R51H2 protein. 44 3e-04
U92074-1|AAB63358.1| 350|Homo sapiens RecA-like protein protein. 44 3e-04
U84138-1|AAC39723.1| 350|Homo sapiens DNA repair protein RAD51B... 44 3e-04
DQ160197-1|AAZ85144.1| 350|Homo sapiens RAD51-like 1 (S. cerevi... 44 3e-04
CR536560-1|CAG38797.1| 350|Homo sapiens RAD51L1 protein. 44 3e-04
BC030219-1|AAH30219.1| 384|Homo sapiens RAD51-like 1 (S. cerevi... 44 3e-04
BT007417-1|AAP36085.1| 346|Homo sapiens X-ray repair complement... 40 0.007
BC011725-1|AAH11725.1| 346|Homo sapiens X-ray repair complement... 40 0.007
BC001036-1|AAH01036.1| 346|Homo sapiens X-ray repair complement... 40 0.007
AF508041-1|AAM23015.1| 346|Homo sapiens X-ray repair complement... 40 0.007
AF037222-1|AAC04805.1| 346|Homo sapiens XRCC3 protein. 40 0.007
AF035586-1|AAC05368.1| 346|Homo sapiens X-ray repair cross-comp... 40 0.007
BT007339-1|AAP36003.1| 134|Homo sapiens RAD51 homolog C (S. cer... 36 0.081
BC101485-1|AAI01486.1| 134|Homo sapiens RAD51C protein protein. 36 0.081
BC093930-1|AAH93930.1| 134|Homo sapiens RAD51C protein protein. 36 0.081
BC000667-1|AAH00667.1| 134|Homo sapiens RAD51C protein protein. 36 0.081
AF029670-1|AAC39605.1| 135|Homo sapiens Rad51C truncated protei... 36 0.081
D63882-1|BAA09932.1| 340|Homo sapiens HsLim15 protein. 35 0.19
CR456486-1|CAG30372.1| 340|Homo sapiens DMC1 protein. 35 0.19
BC125164-1|AAI25165.1| 340|Homo sapiens DMC1 dosage suppressor ... 35 0.19
BC125163-1|AAI25164.1| 340|Homo sapiens DMC1 dosage suppressor ... 35 0.19
BC035658-1|AAH35658.1| 165|Homo sapiens DMC1 protein protein. 35 0.19
AY520538-1|AAR89915.1| 340|Homo sapiens DMC1 dosage suppressor ... 35 0.19
AL022320-2|CAB45656.1| 340|Homo sapiens DMC1 dosage suppressor ... 35 0.19
AB018363-1|BAA33782.1| 85|Homo sapiens TRAD-d7 protein. 34 0.43
AB018362-1|BAA33781.1| 85|Homo sapiens TRAD-d6 protein. 34 0.43
AB018361-1|BAA33780.1| 68|Homo sapiens TRAD-d5 protein. 34 0.43
D64108-1|BAA10970.1| 340|Homo sapiens DMC1 homologue protein. 33 0.57
AK131299-1|BAD18467.1| 340|Homo sapiens protein ( Homo sapiens ... 33 1.00
BC035829-1|AAH35829.1| 649|Homo sapiens RHBDF2 protein protein. 30 7.0
BC016034-1|AAH16034.2| 856|Homo sapiens rhomboid 5 homolog 2 (D... 30 7.0
AY500247-1|AAS77567.1| 827|Homo sapiens rhomboid veinlet-like 5... 30 7.0
AK025994-1|BAB15310.1| 619|Homo sapiens protein ( Homo sapiens ... 30 7.0
>Y15572-1|CAA75681.1| 328|Homo sapiens R51H3 protein.
Length = 328
Score = 94.3 bits (224), Expect = 3e-19
Identities = 45/132 (34%), Positives = 81/132 (61%)
Frame = +1
Query: 196 LTDHVIKMLFQSRIITILDFLQEDVEKLSNICKLSIPQILEARNRILTKFSAPVINGSCF 375
LT+ +I++L RI T++D + D+E+++ C LS ++ R +L +FSA +NG+
Sbjct: 12 LTEEMIQLLRSHRIKTVVDLVSADLEEVAQKCGLSYKALVALRRVLLAQFSAFPVNGADL 71
Query: 376 IDKIRKGTISIKSGVKNLDNMLNRGIPAKTITELCGIAGSGKTQLALQIAINCAKETHKT 555
++++ T + +G+ +LD +L+ G+ +TE+ G GSGKTQ+ L +A N A +
Sbjct: 72 YEELKTSTAILSTGIGSLDKLLDAGLYTGEVTEIVGGPGSGKTQVCLCMAANVAHGLQQN 131
Query: 556 VLYIDTKGDFSA 591
VLY+D+ G +A
Sbjct: 132 VLYVDSNGGLTA 143
>BC014422-1|AAH14422.1| 328|Homo sapiens RAD51-like 3 (S.
cerevisiae) protein.
Length = 328
Score = 94.3 bits (224), Expect = 3e-19
Identities = 45/132 (34%), Positives = 81/132 (61%)
Frame = +1
Query: 196 LTDHVIKMLFQSRIITILDFLQEDVEKLSNICKLSIPQILEARNRILTKFSAPVINGSCF 375
LT+ +I++L RI T++D + D+E+++ C LS ++ R +L +FSA +NG+
Sbjct: 12 LTEEMIQLLRSHRIKTVVDLVSADLEEVAQKCGLSYKALVALRRVLLAQFSAFPVNGADL 71
Query: 376 IDKIRKGTISIKSGVKNLDNMLNRGIPAKTITELCGIAGSGKTQLALQIAINCAKETHKT 555
++++ T + +G+ +LD +L+ G+ +TE+ G GSGKTQ+ L +A N A +
Sbjct: 72 YEELKTSTAILSTGIGSLDKLLDAGLYTGEVTEIVGGPGSGKTQVCLCMAANVAHGLQQN 131
Query: 556 VLYIDTKGDFSA 591
VLY+D+ G +A
Sbjct: 132 VLYVDSNGGLTA 143
>AY623116-1|AAT38112.1| 328|Homo sapiens RAD51-like 3 (S.
cerevisiae) protein.
Length = 328
Score = 94.3 bits (224), Expect = 3e-19
Identities = 45/132 (34%), Positives = 81/132 (61%)
Frame = +1
Query: 196 LTDHVIKMLFQSRIITILDFLQEDVEKLSNICKLSIPQILEARNRILTKFSAPVINGSCF 375
LT+ +I++L RI T++D + D+E+++ C LS ++ R +L +FSA +NG+
Sbjct: 12 LTEEMIQLLRSHRIKTVVDLVSADLEEVAQKCGLSYKALVALRRVLLAQFSAFPVNGADL 71
Query: 376 IDKIRKGTISIKSGVKNLDNMLNRGIPAKTITELCGIAGSGKTQLALQIAINCAKETHKT 555
++++ T + +G+ +LD +L+ G+ +TE+ G GSGKTQ+ L +A N A +
Sbjct: 72 YEELKTSTAILSTGIGSLDKLLDAGLYTGEVTEIVGGPGSGKTQVCLCMAANVAHGLQQN 131
Query: 556 VLYIDTKGDFSA 591
VLY+D+ G +A
Sbjct: 132 VLYVDSNGGLTA 143
>AB013341-1|BAA25914.1| 328|Homo sapiens Trad protein.
Length = 328
Score = 94.3 bits (224), Expect = 3e-19
Identities = 45/132 (34%), Positives = 81/132 (61%)
Frame = +1
Query: 196 LTDHVIKMLFQSRIITILDFLQEDVEKLSNICKLSIPQILEARNRILTKFSAPVINGSCF 375
LT+ +I++L RI T++D + D+E+++ C LS ++ R +L +FSA +NG+
Sbjct: 12 LTEEMIQLLRSHRIKTVVDLVSADLEEVAQKCGLSYKALVALRRVLLAQFSAFPVNGADL 71
Query: 376 IDKIRKGTISIKSGVKNLDNMLNRGIPAKTITELCGIAGSGKTQLALQIAINCAKETHKT 555
++++ T + +G+ +LD +L+ G+ +TE+ G GSGKTQ+ L +A N A +
Sbjct: 72 YEELKTSTAILSTGIGSLDKLLDAGLYTGEVTEIVGGPGSGKTQVCLCMAANVAHGLQQN 131
Query: 556 VLYIDTKGDFSA 591
VLY+D+ G +A
Sbjct: 132 VLYVDSNGGLTA 143
>AB018360-1|BAA33779.1| 95|Homo sapiens TRAD-d4 protein.
Length = 95
Score = 59.3 bits (137), Expect = 1e-08
Identities = 27/81 (33%), Positives = 50/81 (61%)
Frame = +1
Query: 265 DVEKLSNICKLSIPQILEARNRILTKFSAPVINGSCFIDKIRKGTISIKSGVKNLDNMLN 444
D+E+++ C LS ++ R +L +FSA +NG+ ++++ T + +G+ +LD +L+
Sbjct: 2 DLEEVAQKCGLSYKALVALRRVLLAQFSAFPVNGADLYEELKTSTAILSTGIGSLDKLLD 61
Query: 445 RGIPAKTITELCGIAGSGKTQ 507
G+ +TE+ G GSGKTQ
Sbjct: 62 AGLYTGEVTEIVGGPGSGKTQ 82
>AF034956-1|AAC39719.1| 289|Homo sapiens RAD51D protein.
Length = 289
Score = 50.4 bits (115), Expect = 5e-06
Identities = 24/57 (42%), Positives = 35/57 (61%)
Frame = +1
Query: 421 KNLDNMLNRGIPAKTITELCGIAGSGKTQLALQIAINCAKETHKTVLYIDTKGDFSA 591
K LD +L+ G+ +TE+ G GSGKTQ+ L +A N A + VLY+D+ G +A
Sbjct: 48 KXLDKLLDAGLYTGEVTEIVGGPGSGKTQVCLCMAANVAHGLQQNVLYVDSNGGLTA 104
>BC107753-1|AAI07754.1| 376|Homo sapiens RAD51 homolog C (S.
cerevisiae) protein.
Length = 376
Score = 47.6 bits (108), Expect = 3e-05
Identities = 23/58 (39%), Positives = 34/58 (58%), Gaps = 5/58 (8%)
Frame = +1
Query: 427 LDNMLNRGIPAKTITELCGIAGSGKTQLALQIAIN-----CAKETHKTVLYIDTKGDF 585
LD++L G+P TE+CG G GKTQL +Q+A++ C ++IDT+G F
Sbjct: 107 LDDILGGGVPLMKTTEICGAPGVGKTQLCMQLAVDVQIPECFGGVAGEAVFIDTEGSF 164
>AY623112-1|AAT38108.1| 376|Homo sapiens RAD51 homolog C (S.
cerevisiae) protein.
Length = 376
Score = 47.6 bits (108), Expect = 3e-05
Identities = 23/58 (39%), Positives = 34/58 (58%), Gaps = 5/58 (8%)
Frame = +1
Query: 427 LDNMLNRGIPAKTITELCGIAGSGKTQLALQIAIN-----CAKETHKTVLYIDTKGDF 585
LD++L G+P TE+CG G GKTQL +Q+A++ C ++IDT+G F
Sbjct: 107 LDDILGGGVPLMKTTEICGAPGVGKTQLCMQLAVDVQIPECFGGVAGEAVFIDTEGSF 164
>AF029669-1|AAC39604.1| 376|Homo sapiens Rad51C protein.
Length = 376
Score = 47.6 bits (108), Expect = 3e-05
Identities = 23/58 (39%), Positives = 34/58 (58%), Gaps = 5/58 (8%)
Frame = +1
Query: 427 LDNMLNRGIPAKTITELCGIAGSGKTQLALQIAIN-----CAKETHKTVLYIDTKGDF 585
LD++L G+P TE+CG G GKTQL +Q+A++ C ++IDT+G F
Sbjct: 107 LDDILGGGVPLMKTTEICGAPGVGKTQLCMQLAVDVQIPECFGGVAGEAVFIDTEGSF 164
>BT019705-1|AAV38511.1| 339|Homo sapiens RAD51 homolog (RecA
homolog, E. coli) (S. cerevisiae) protein.
Length = 339
Score = 46.8 bits (106), Expect = 6e-05
Identities = 27/71 (38%), Positives = 37/71 (52%), Gaps = 5/71 (7%)
Frame = +1
Query: 388 RKGTISIKSGVKNLDNMLNRGIPAKTITELCGIAGSGKTQLALQIAINC-----AKETHK 552
R I I +G K LD +L GI +ITE+ G +GKTQ+ +A+ C E
Sbjct: 96 RSEIIQITTGSKELDKLLQGGIETGSITEMFGEFRTGKTQICHTLAVTCQLPIDRGEGEG 155
Query: 553 TVLYIDTKGDF 585
+YIDT+G F
Sbjct: 156 KAMYIDTEGTF 166
>D14134-1|BAA03189.1| 339|Homo sapiens RAD51 protein.
Length = 339
Score = 46.0 bits (104), Expect = 1e-04
Identities = 26/71 (36%), Positives = 37/71 (52%), Gaps = 5/71 (7%)
Frame = +1
Query: 388 RKGTISIKSGVKNLDNMLNRGIPAKTITELCGIAGSGKTQLALQIAINCAKETHK----- 552
R I I +G K LD +L GI +ITE+ G +GKTQ+ +A+ C +
Sbjct: 96 RSEIIQITTGSKELDKLLQGGIETGSITEMFGEFRTGKTQICHTLAVTCQLPIDRGGGEG 155
Query: 553 TVLYIDTKGDF 585
+YIDT+G F
Sbjct: 156 KAMYIDTEGTF 166
>D13804-1|BAA02962.1| 339|Homo sapiens HsRad51 protein.
Length = 339
Score = 46.0 bits (104), Expect = 1e-04
Identities = 26/71 (36%), Positives = 37/71 (52%), Gaps = 5/71 (7%)
Frame = +1
Query: 388 RKGTISIKSGVKNLDNMLNRGIPAKTITELCGIAGSGKTQLALQIAINCAKETHK----- 552
R I I +G K LD +L GI +ITE+ G +GKTQ+ +A+ C +
Sbjct: 96 RSEIIQITTGSKELDKLLQGGIETGSITEMFGEFRTGKTQICHTLAVTCQLPIDRGGGEG 155
Query: 553 TVLYIDTKGDF 585
+YIDT+G F
Sbjct: 156 KAMYIDTEGTF 166
>CR536559-1|CAG38796.1| 339|Homo sapiens RAD51 protein.
Length = 339
Score = 46.0 bits (104), Expect = 1e-04
Identities = 26/71 (36%), Positives = 37/71 (52%), Gaps = 5/71 (7%)
Frame = +1
Query: 388 RKGTISIKSGVKNLDNMLNRGIPAKTITELCGIAGSGKTQLALQIAINCAKETHK----- 552
R I I +G K LD +L GI +ITE+ G +GKTQ+ +A+ C +
Sbjct: 96 RSEIIQITTGSKELDKLLQGGIETGSITEMFGEFRTGKTQICHTLAVTCQLPIDRGGGEG 155
Query: 553 TVLYIDTKGDF 585
+YIDT+G F
Sbjct: 156 KAMYIDTEGTF 166
>AY196785-1|AAN87149.1| 339|Homo sapiens RAD51 homolog (RecA
homolog, E. coli) (S. cerevisiae) protein.
Length = 339
Score = 46.0 bits (104), Expect = 1e-04
Identities = 26/71 (36%), Positives = 37/71 (52%), Gaps = 5/71 (7%)
Frame = +1
Query: 388 RKGTISIKSGVKNLDNMLNRGIPAKTITELCGIAGSGKTQLALQIAINCAKETHK----- 552
R I I +G K LD +L GI +ITE+ G +GKTQ+ +A+ C +
Sbjct: 96 RSEIIQITTGSKELDKLLQGGIETGSITEMFGEFRTGKTQICHTLAVTCQLPIDRGGGEG 155
Query: 553 TVLYIDTKGDF 585
+YIDT+G F
Sbjct: 156 KAMYIDTEGTF 166
>AF233744-1|AAF69145.1| 339|Homo sapiens RAD51 protein.
Length = 339
Score = 46.0 bits (104), Expect = 1e-04
Identities = 26/71 (36%), Positives = 37/71 (52%), Gaps = 5/71 (7%)
Frame = +1
Query: 388 RKGTISIKSGVKNLDNMLNRGIPAKTITELCGIAGSGKTQLALQIAINCAKETHK----- 552
R I I +G K LD +L GI +ITE+ G +GKTQ+ +A+ C +
Sbjct: 96 RSEIIQITTGSKELDKLLQGGIETGSITEMFGEFRTGKTQICHTLAVTCQLPIDRGGGEG 155
Query: 553 TVLYIDTKGDF 585
+YIDT+G F
Sbjct: 156 KAMYIDTEGTF 166
>AF165094-1|AAD49705.1| 339|Homo sapiens Rad51 protein.
Length = 339
Score = 46.0 bits (104), Expect = 1e-04
Identities = 26/71 (36%), Positives = 37/71 (52%), Gaps = 5/71 (7%)
Frame = +1
Query: 388 RKGTISIKSGVKNLDNMLNRGIPAKTITELCGIAGSGKTQLALQIAINCAKETHK----- 552
R I I +G K LD +L GI +ITE+ G +GKTQ+ +A+ C +
Sbjct: 96 RSEIIQITTGSKELDKLLQGGIETGSITEMFGEFRTGKTQICHTLAVTCQLPIDRGGGEG 155
Query: 553 TVLYIDTKGDF 585
+YIDT+G F
Sbjct: 156 KAMYIDTEGTF 166
>Y15571-1|CAA75680.1| 350|Homo sapiens R51H2 protein.
Length = 350
Score = 44.4 bits (100), Expect = 3e-04
Identities = 38/140 (27%), Positives = 65/140 (46%), Gaps = 8/140 (5%)
Frame = +1
Query: 196 LTDHVIKMLFQSRIITILDFLQEDVEKLSNICKLSIPQILEARNRILTKFSAPVINGSCF 375
L+ + L + +I+T DFL +L + LS + E + ++ AP + +
Sbjct: 11 LSQELCDRLSRHQILTCQDFLCLSPLELMKVTGLSYRGVHELLCMV-SRACAPKMQTAYG 69
Query: 376 IDKIRKGTIS---IKSGVKNLDNMLNRGIPAKTITELCGIAGSGKTQLALQIAINCAKET 546
I R S + + + LD L+ G+ ++TE+ G G GKTQ + ++I T
Sbjct: 70 IKAQRSADFSPAFLSTTLSALDEALHGGVACGSLTEITGPPGCGKTQFCIMMSILATLPT 129
Query: 547 HK-----TVLYIDTKGDFSA 591
+ V+YIDT+ FSA
Sbjct: 130 NMGGLEGAVVYIDTESAFSA 149
>U92074-1|AAB63358.1| 350|Homo sapiens RecA-like protein protein.
Length = 350
Score = 44.4 bits (100), Expect = 3e-04
Identities = 38/140 (27%), Positives = 65/140 (46%), Gaps = 8/140 (5%)
Frame = +1
Query: 196 LTDHVIKMLFQSRIITILDFLQEDVEKLSNICKLSIPQILEARNRILTKFSAPVINGSCF 375
L+ + L + +I+T DFL +L + LS + E + ++ AP + +
Sbjct: 11 LSQELCDRLSRHQILTCQDFLCLSPLELMKVTGLSYRGVHELLCMV-SRACAPKMQTAYG 69
Query: 376 IDKIRKGTIS---IKSGVKNLDNMLNRGIPAKTITELCGIAGSGKTQLALQIAINCAKET 546
I R S + + + LD L+ G+ ++TE+ G G GKTQ + ++I T
Sbjct: 70 IKAQRSADFSPAFLSTTLSALDEALHGGVACGSLTEITGPPGCGKTQFCIMMSILATLPT 129
Query: 547 HK-----TVLYIDTKGDFSA 591
+ V+YIDT+ FSA
Sbjct: 130 NMGGLEGAVVYIDTESAFSA 149
>U84138-1|AAC39723.1| 350|Homo sapiens DNA repair protein RAD51B
protein.
Length = 350
Score = 44.4 bits (100), Expect = 3e-04
Identities = 38/140 (27%), Positives = 65/140 (46%), Gaps = 8/140 (5%)
Frame = +1
Query: 196 LTDHVIKMLFQSRIITILDFLQEDVEKLSNICKLSIPQILEARNRILTKFSAPVINGSCF 375
L+ + L + +I+T DFL +L + LS + E + ++ AP + +
Sbjct: 11 LSQELCDRLSRHQILTCQDFLCLSPLELMKVTGLSYRGVHELLCMV-SRACAPKMQTAYG 69
Query: 376 IDKIRKGTIS---IKSGVKNLDNMLNRGIPAKTITELCGIAGSGKTQLALQIAINCAKET 546
I R S + + + LD L+ G+ ++TE+ G G GKTQ + ++I T
Sbjct: 70 IKAQRSADFSPAFLSTTLSALDEALHGGVACGSLTEITGPPGCGKTQFCIMMSILATLPT 129
Query: 547 HK-----TVLYIDTKGDFSA 591
+ V+YIDT+ FSA
Sbjct: 130 NMGGLEGAVVYIDTESAFSA 149
>DQ160197-1|AAZ85144.1| 350|Homo sapiens RAD51-like 1 (S.
cerevisiae) protein.
Length = 350
Score = 44.4 bits (100), Expect = 3e-04
Identities = 38/140 (27%), Positives = 65/140 (46%), Gaps = 8/140 (5%)
Frame = +1
Query: 196 LTDHVIKMLFQSRIITILDFLQEDVEKLSNICKLSIPQILEARNRILTKFSAPVINGSCF 375
L+ + L + +I+T DFL +L + LS + E + ++ AP + +
Sbjct: 11 LSQELCDRLSRHQILTCQDFLCLSPLELMKVTGLSYRGVHELLCMV-SRACAPKMQTAYG 69
Query: 376 IDKIRKGTIS---IKSGVKNLDNMLNRGIPAKTITELCGIAGSGKTQLALQIAINCAKET 546
I R S + + + LD L+ G+ ++TE+ G G GKTQ + ++I T
Sbjct: 70 IKAQRSADFSPAFLSTTLSALDEALHGGVACGSLTEITGPPGCGKTQFCIMMSILATLPT 129
Query: 547 HK-----TVLYIDTKGDFSA 591
+ V+YIDT+ FSA
Sbjct: 130 NMGGLEGAVVYIDTESAFSA 149
>CR536560-1|CAG38797.1| 350|Homo sapiens RAD51L1 protein.
Length = 350
Score = 44.4 bits (100), Expect = 3e-04
Identities = 38/140 (27%), Positives = 65/140 (46%), Gaps = 8/140 (5%)
Frame = +1
Query: 196 LTDHVIKMLFQSRIITILDFLQEDVEKLSNICKLSIPQILEARNRILTKFSAPVINGSCF 375
L+ + L + +I+T DFL +L + LS + E + ++ AP + +
Sbjct: 11 LSQELCDRLSRHQILTCQDFLCLSPLELMKVTGLSYRGVHELLCMV-SRACAPKMQTAYG 69
Query: 376 IDKIRKGTIS---IKSGVKNLDNMLNRGIPAKTITELCGIAGSGKTQLALQIAINCAKET 546
I R S + + + LD L+ G+ ++TE+ G G GKTQ + ++I T
Sbjct: 70 IKAQRSADFSPAFLSTTLSALDEALHGGVACGSLTEITGPPGCGKTQFCIMMSILATLPT 129
Query: 547 HK-----TVLYIDTKGDFSA 591
+ V+YIDT+ FSA
Sbjct: 130 NMGGLEGAVVYIDTESAFSA 149
>BC030219-1|AAH30219.1| 384|Homo sapiens RAD51-like 1 (S.
cerevisiae) protein.
Length = 384
Score = 44.4 bits (100), Expect = 3e-04
Identities = 38/140 (27%), Positives = 65/140 (46%), Gaps = 8/140 (5%)
Frame = +1
Query: 196 LTDHVIKMLFQSRIITILDFLQEDVEKLSNICKLSIPQILEARNRILTKFSAPVINGSCF 375
L+ + L + +I+T DFL +L + LS + E + ++ AP + +
Sbjct: 11 LSQELCDRLSRHQILTCQDFLCLSPLELMKVTGLSYRGVHELLCMV-SRACAPKMQTAYG 69
Query: 376 IDKIRKGTIS---IKSGVKNLDNMLNRGIPAKTITELCGIAGSGKTQLALQIAINCAKET 546
I R S + + + LD L+ G+ ++TE+ G G GKTQ + ++I T
Sbjct: 70 IKAQRSADFSPAFLSTTLSALDEALHGGVACGSLTEITGPPGCGKTQFCIMMSILATLPT 129
Query: 547 HK-----TVLYIDTKGDFSA 591
+ V+YIDT+ FSA
Sbjct: 130 NMGGLEGAVVYIDTESAFSA 149
>BT007417-1|AAP36085.1| 346|Homo sapiens X-ray repair complementing
defective repair in Chinese hamster cells 3 protein.
Length = 346
Score = 39.9 bits (89), Expect = 0.007
Identities = 19/38 (50%), Positives = 25/38 (65%)
Frame = +1
Query: 415 GVKNLDNMLNRGIPAKTITELCGIAGSGKTQLALQIAI 528
G LD +L G+P ITEL G + +GKTQLALQ+ +
Sbjct: 85 GCPVLDALLRGGLPLDGITELAGRSSAGKTQLALQLCL 122
>BC011725-1|AAH11725.1| 346|Homo sapiens X-ray repair complementing
defective repair in Chinese hamster cells 3 protein.
Length = 346
Score = 39.9 bits (89), Expect = 0.007
Identities = 19/38 (50%), Positives = 25/38 (65%)
Frame = +1
Query: 415 GVKNLDNMLNRGIPAKTITELCGIAGSGKTQLALQIAI 528
G LD +L G+P ITEL G + +GKTQLALQ+ +
Sbjct: 85 GCPVLDALLRGGLPLDGITELAGRSSAGKTQLALQLCL 122
>BC001036-1|AAH01036.1| 346|Homo sapiens X-ray repair complementing
defective repair in Chinese hamster cells 3 protein.
Length = 346
Score = 39.9 bits (89), Expect = 0.007
Identities = 19/38 (50%), Positives = 25/38 (65%)
Frame = +1
Query: 415 GVKNLDNMLNRGIPAKTITELCGIAGSGKTQLALQIAI 528
G LD +L G+P ITEL G + +GKTQLALQ+ +
Sbjct: 85 GCPVLDALLRGGLPLDGITELAGRSSAGKTQLALQLCL 122
>AF508041-1|AAM23015.1| 346|Homo sapiens X-ray repair complementing
defective repair in Chinese hamster cells 3 protein.
Length = 346
Score = 39.9 bits (89), Expect = 0.007
Identities = 19/38 (50%), Positives = 25/38 (65%)
Frame = +1
Query: 415 GVKNLDNMLNRGIPAKTITELCGIAGSGKTQLALQIAI 528
G LD +L G+P ITEL G + +GKTQLALQ+ +
Sbjct: 85 GCPVLDALLRGGLPLDGITELAGRSSAGKTQLALQLCL 122
>AF037222-1|AAC04805.1| 346|Homo sapiens XRCC3 protein.
Length = 346
Score = 39.9 bits (89), Expect = 0.007
Identities = 19/38 (50%), Positives = 25/38 (65%)
Frame = +1
Query: 415 GVKNLDNMLNRGIPAKTITELCGIAGSGKTQLALQIAI 528
G LD +L G+P ITEL G + +GKTQLALQ+ +
Sbjct: 85 GCPVLDALLRGGLPLDGITELAGRSSAGKTQLALQLCL 122
>AF035586-1|AAC05368.1| 346|Homo sapiens X-ray repair
cross-complementing protein 3 protein.
Length = 346
Score = 39.9 bits (89), Expect = 0.007
Identities = 19/38 (50%), Positives = 25/38 (65%)
Frame = +1
Query: 415 GVKNLDNMLNRGIPAKTITELCGIAGSGKTQLALQIAI 528
G LD +L G+P ITEL G + +GKTQLALQ+ +
Sbjct: 85 GCPVLDALLRGGLPLDGITELAGRSSAGKTQLALQLCL 122
>BT007339-1|AAP36003.1| 134|Homo sapiens RAD51 homolog C (S.
cerevisiae) protein.
Length = 134
Score = 36.3 bits (80), Expect = 0.081
Identities = 15/28 (53%), Positives = 19/28 (67%)
Frame = +1
Query: 427 LDNMLNRGIPAKTITELCGIAGSGKTQL 510
LD++L G+P TE+CG G GKTQL
Sbjct: 107 LDDILGGGVPLMKTTEICGAPGVGKTQL 134
>BC101485-1|AAI01486.1| 134|Homo sapiens RAD51C protein protein.
Length = 134
Score = 36.3 bits (80), Expect = 0.081
Identities = 15/28 (53%), Positives = 19/28 (67%)
Frame = +1
Query: 427 LDNMLNRGIPAKTITELCGIAGSGKTQL 510
LD++L G+P TE+CG G GKTQL
Sbjct: 107 LDDILGGGVPLMKTTEICGAPGVGKTQL 134
>BC093930-1|AAH93930.1| 134|Homo sapiens RAD51C protein protein.
Length = 134
Score = 36.3 bits (80), Expect = 0.081
Identities = 15/28 (53%), Positives = 19/28 (67%)
Frame = +1
Query: 427 LDNMLNRGIPAKTITELCGIAGSGKTQL 510
LD++L G+P TE+CG G GKTQL
Sbjct: 107 LDDILGGGVPLMKTTEICGAPGVGKTQL 134
>BC000667-1|AAH00667.1| 134|Homo sapiens RAD51C protein protein.
Length = 134
Score = 36.3 bits (80), Expect = 0.081
Identities = 15/28 (53%), Positives = 19/28 (67%)
Frame = +1
Query: 427 LDNMLNRGIPAKTITELCGIAGSGKTQL 510
LD++L G+P TE+CG G GKTQL
Sbjct: 107 LDDILGGGVPLMKTTEICGAPGVGKTQL 134
>AF029670-1|AAC39605.1| 135|Homo sapiens Rad51C truncated protein
protein.
Length = 135
Score = 36.3 bits (80), Expect = 0.081
Identities = 15/28 (53%), Positives = 19/28 (67%)
Frame = +1
Query: 427 LDNMLNRGIPAKTITELCGIAGSGKTQL 510
LD++L G+P TE+CG G GKTQL
Sbjct: 107 LDDILGGGVPLMKTTEICGAPGVGKTQL 134
>D63882-1|BAA09932.1| 340|Homo sapiens HsLim15 protein.
Length = 340
Score = 35.1 bits (77), Expect = 0.19
Identities = 32/109 (29%), Positives = 48/109 (44%), Gaps = 3/109 (2%)
Frame = +1
Query: 211 IKMLFQSRIITILDFLQEDVEKLSNICKLS---IPQILEARNRILTKFSAPVINGSCFID 381
IK L I TI L N+ LS + +I EA N+++ P +
Sbjct: 37 IKKLKSVGICTIKGIQMTTRRALCNVKGLSEAKVDKIKEAANKLIE----PGFLTAFEYS 92
Query: 382 KIRKGTISIKSGVKNLDNMLNRGIPAKTITELCGIAGSGKTQLALQIAI 528
+ RK I +G + D +L GI + ITE G +GKTQL+ + +
Sbjct: 93 EKRKMVFHITTGSQEFDKLLGGGIESMAITEAFGEFRTGKTQLSHTLCV 141
>CR456486-1|CAG30372.1| 340|Homo sapiens DMC1 protein.
Length = 340
Score = 35.1 bits (77), Expect = 0.19
Identities = 32/109 (29%), Positives = 48/109 (44%), Gaps = 3/109 (2%)
Frame = +1
Query: 211 IKMLFQSRIITILDFLQEDVEKLSNICKLS---IPQILEARNRILTKFSAPVINGSCFID 381
IK L I TI L N+ LS + +I EA N+++ P +
Sbjct: 37 IKKLKSVGICTIKGIQMTTRRALCNVKGLSEAKVDKIKEAANKLIE----PGFLTAFEYS 92
Query: 382 KIRKGTISIKSGVKNLDNMLNRGIPAKTITELCGIAGSGKTQLALQIAI 528
+ RK I +G + D +L GI + ITE G +GKTQL+ + +
Sbjct: 93 EKRKMVFHITTGSQEFDKLLGGGIESMAITEAFGEFRTGKTQLSHTLCV 141
>BC125164-1|AAI25165.1| 340|Homo sapiens DMC1 dosage suppressor of
mck1 homolog, meiosis-specific homologous recombinati
protein.
Length = 340
Score = 35.1 bits (77), Expect = 0.19
Identities = 32/109 (29%), Positives = 48/109 (44%), Gaps = 3/109 (2%)
Frame = +1
Query: 211 IKMLFQSRIITILDFLQEDVEKLSNICKLS---IPQILEARNRILTKFSAPVINGSCFID 381
IK L I TI L N+ LS + +I EA N+++ P +
Sbjct: 37 IKKLKSVGICTIKGIQMTTRRALCNVKGLSEAKVDKIKEAANKLIE----PGFLTAFEYS 92
Query: 382 KIRKGTISIKSGVKNLDNMLNRGIPAKTITELCGIAGSGKTQLALQIAI 528
+ RK I +G + D +L GI + ITE G +GKTQL+ + +
Sbjct: 93 EKRKMVFHITTGSQEFDKLLGGGIESMAITEAFGEFRTGKTQLSHTLCV 141
>BC125163-1|AAI25164.1| 340|Homo sapiens DMC1 dosage suppressor of
mck1 homolog, meiosis-specific homologous recombinati
protein.
Length = 340
Score = 35.1 bits (77), Expect = 0.19
Identities = 32/109 (29%), Positives = 48/109 (44%), Gaps = 3/109 (2%)
Frame = +1
Query: 211 IKMLFQSRIITILDFLQEDVEKLSNICKLS---IPQILEARNRILTKFSAPVINGSCFID 381
IK L I TI L N+ LS + +I EA N+++ P +
Sbjct: 37 IKKLKSVGICTIKGIQMTTRRALCNVKGLSEAKVDKIKEAANKLIE----PGFLTAFEYS 92
Query: 382 KIRKGTISIKSGVKNLDNMLNRGIPAKTITELCGIAGSGKTQLALQIAI 528
+ RK I +G + D +L GI + ITE G +GKTQL+ + +
Sbjct: 93 EKRKMVFHITTGSQEFDKLLGGGIESMAITEAFGEFRTGKTQLSHTLCV 141
>BC035658-1|AAH35658.1| 165|Homo sapiens DMC1 protein protein.
Length = 165
Score = 35.1 bits (77), Expect = 0.19
Identities = 32/109 (29%), Positives = 48/109 (44%), Gaps = 3/109 (2%)
Frame = +1
Query: 211 IKMLFQSRIITILDFLQEDVEKLSNICKLS---IPQILEARNRILTKFSAPVINGSCFID 381
IK L I TI L N+ LS + +I EA N+++ P +
Sbjct: 37 IKKLKSVGICTIKGIQMTTRRALCNVKGLSEAKVDKIKEAANKLIE----PGFLTAFEYS 92
Query: 382 KIRKGTISIKSGVKNLDNMLNRGIPAKTITELCGIAGSGKTQLALQIAI 528
+ RK I +G + D +L GI + ITE G +GKTQL+ + +
Sbjct: 93 EKRKMVFHITTGSQEFDKLLGGGIESMAITEAFGEFRTGKTQLSHTLCV 141
>AY520538-1|AAR89915.1| 340|Homo sapiens DMC1 dosage suppressor of
mck1 homolog, meiosis-specific homologous recombinati
protein.
Length = 340
Score = 35.1 bits (77), Expect = 0.19
Identities = 32/109 (29%), Positives = 48/109 (44%), Gaps = 3/109 (2%)
Frame = +1
Query: 211 IKMLFQSRIITILDFLQEDVEKLSNICKLS---IPQILEARNRILTKFSAPVINGSCFID 381
IK L I TI L N+ LS + +I EA N+++ P +
Sbjct: 37 IKKLKSVGICTIKGIQMTTRRALCNVKGLSEAKVDKIKEAANKLIE----PGFLTAFEYS 92
Query: 382 KIRKGTISIKSGVKNLDNMLNRGIPAKTITELCGIAGSGKTQLALQIAI 528
+ RK I +G + D +L GI + ITE G +GKTQL+ + +
Sbjct: 93 EKRKMVFHITTGSQEFDKLLGGGIESMAITEAFGEFRTGKTQLSHTLCV 141
>AL022320-2|CAB45656.1| 340|Homo sapiens DMC1 dosage suppressor of
mck1 homolog, meiosis-specific homologous recombinati
protein.
Length = 340
Score = 35.1 bits (77), Expect = 0.19
Identities = 32/109 (29%), Positives = 48/109 (44%), Gaps = 3/109 (2%)
Frame = +1
Query: 211 IKMLFQSRIITILDFLQEDVEKLSNICKLS---IPQILEARNRILTKFSAPVINGSCFID 381
IK L I TI L N+ LS + +I EA N+++ P +
Sbjct: 37 IKKLKSVGICTIKGIQMTTRRALCNVKGLSEAKVDKIKEAANKLIE----PGFLTAFEYS 92
Query: 382 KIRKGTISIKSGVKNLDNMLNRGIPAKTITELCGIAGSGKTQLALQIAI 528
+ RK I +G + D +L GI + ITE G +GKTQL+ + +
Sbjct: 93 EKRKMVFHITTGSQEFDKLLGGGIESMAITEAFGEFRTGKTQLSHTLCV 141
>AB018363-1|BAA33782.1| 85|Homo sapiens TRAD-d7 protein.
Length = 85
Score = 33.9 bits (74), Expect = 0.43
Identities = 14/52 (26%), Positives = 31/52 (59%)
Frame = +1
Query: 265 DVEKLSNICKLSIPQILEARNRILTKFSAPVINGSCFIDKIRKGTISIKSGV 420
D+E+++ C LS ++ R +L +FSA +NG+ ++++ T + +G+
Sbjct: 2 DLEEVAQKCGLSYKALVALRRVLLAQFSAFPVNGADLYEELKTSTAILSTGI 53
>AB018362-1|BAA33781.1| 85|Homo sapiens TRAD-d6 protein.
Length = 85
Score = 33.9 bits (74), Expect = 0.43
Identities = 14/52 (26%), Positives = 31/52 (59%)
Frame = +1
Query: 265 DVEKLSNICKLSIPQILEARNRILTKFSAPVINGSCFIDKIRKGTISIKSGV 420
D+E+++ C LS ++ R +L +FSA +NG+ ++++ T + +G+
Sbjct: 2 DLEEVAQKCGLSYKALVALRRVLLAQFSAFPVNGADLYEELKTSTAILSTGI 53
>AB018361-1|BAA33780.1| 68|Homo sapiens TRAD-d5 protein.
Length = 68
Score = 33.9 bits (74), Expect = 0.43
Identities = 14/52 (26%), Positives = 31/52 (59%)
Frame = +1
Query: 265 DVEKLSNICKLSIPQILEARNRILTKFSAPVINGSCFIDKIRKGTISIKSGV 420
D+E+++ C LS ++ R +L +FSA +NG+ ++++ T + +G+
Sbjct: 2 DLEEVAQKCGLSYKALVALRRVLLAQFSAFPVNGADLYEELKTSTAILSTGI 53
>D64108-1|BAA10970.1| 340|Homo sapiens DMC1 homologue protein.
Length = 340
Score = 33.5 bits (73), Expect = 0.57
Identities = 22/84 (26%), Positives = 40/84 (47%)
Frame = +1
Query: 277 LSNICKLSIPQILEARNRILTKFSAPVINGSCFIDKIRKGTISIKSGVKNLDNMLNRGIP 456
+ + + + +I EA N+++ P + + RK I +G + D +L GI
Sbjct: 62 VKGLSEAKVDKIKEAANKLIE----PGFLTAFEYSEKRKMVFHITTGSQEFDKLLGGGIE 117
Query: 457 AKTITELCGIAGSGKTQLALQIAI 528
+ ITE G +GKTQL+ + +
Sbjct: 118 SMAITEAFGEFRTGKTQLSHTLCV 141
>AK131299-1|BAD18467.1| 340|Homo sapiens protein ( Homo sapiens
cDNA FLJ16262 fis, clone IMR322008651, highly similar
to DNA REPAIR PROTEIN RAD51. ).
Length = 340
Score = 32.7 bits (71), Expect = 1.00
Identities = 18/51 (35%), Positives = 27/51 (52%), Gaps = 5/51 (9%)
Frame = +1
Query: 448 GIPAKTITELCGIAGSGKTQLALQIAINCAKETHK-----TVLYIDTKGDF 585
GI +ITE+ G +GKTQ+ +A+ C + +YIDT+G F
Sbjct: 117 GIETGSITEMFGEFRTGKTQICHTLAVTCQLPIDRGGGEGKAMYIDTEGTF 167
>BC035829-1|AAH35829.1| 649|Homo sapiens RHBDF2 protein protein.
Length = 649
Score = 29.9 bits (64), Expect = 7.0
Identities = 21/58 (36%), Positives = 28/58 (48%)
Frame = -2
Query: 471 CNRLSWDSSIEHII*ILYSGLNTNCAFSDFIDKTTTVNHRRRKLR*YSIPCFQNLWYA 298
C L W +I HI L SGL AF +I T+ +R+R L S+ F L+ A
Sbjct: 555 CGLLPWIDNIAHIFGFL-SGLLLAFAFLPYITFGTSDKYRKRALILVSLLAFAGLFAA 611
>BC016034-1|AAH16034.2| 856|Homo sapiens rhomboid 5 homolog 2
(Drosophila) protein.
Length = 856
Score = 29.9 bits (64), Expect = 7.0
Identities = 21/58 (36%), Positives = 28/58 (48%)
Frame = -2
Query: 471 CNRLSWDSSIEHII*ILYSGLNTNCAFSDFIDKTTTVNHRRRKLR*YSIPCFQNLWYA 298
C L W +I HI L SGL AF +I T+ +R+R L S+ F L+ A
Sbjct: 762 CGLLPWIDNIAHIFGFL-SGLLLAFAFLPYITFGTSDKYRKRALILVSLLAFAGLFAA 818
>AY500247-1|AAS77567.1| 827|Homo sapiens rhomboid veinlet-like 5
protein.
Length = 827
Score = 29.9 bits (64), Expect = 7.0
Identities = 21/58 (36%), Positives = 28/58 (48%)
Frame = -2
Query: 471 CNRLSWDSSIEHII*ILYSGLNTNCAFSDFIDKTTTVNHRRRKLR*YSIPCFQNLWYA 298
C L W +I HI L SGL AF +I T+ +R+R L S+ F L+ A
Sbjct: 733 CGLLPWIDNIAHIFGFL-SGLLLAFAFLPYITFGTSDKYRKRALILVSLLAFAGLFAA 789
>AK025994-1|BAB15310.1| 619|Homo sapiens protein ( Homo sapiens
cDNA: FLJ22341 fis, clone HRC06032. ).
Length = 619
Score = 29.9 bits (64), Expect = 7.0
Identities = 21/58 (36%), Positives = 28/58 (48%)
Frame = -2
Query: 471 CNRLSWDSSIEHII*ILYSGLNTNCAFSDFIDKTTTVNHRRRKLR*YSIPCFQNLWYA 298
C L W +I HI L SGL AF +I T+ +R+R L S+ F L+ A
Sbjct: 525 CGLLPWIDNIAHIFGFL-SGLLLAFAFLPYITFGTSDKYRKRALILVSLLAFAGLFAA 581
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 73,918,987
Number of Sequences: 237096
Number of extensions: 1475165
Number of successful extensions: 9994
Number of sequences better than 10.0: 49
Number of HSP's better than 10.0 without gapping: 9948
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9994
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 6211568660
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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