Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte18g22
         (592 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          25   0.73 
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      23   1.7  
EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          22   3.9  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      22   3.9  
AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    22   5.2  
DQ667193-1|ABG75745.1|  510|Apis mellifera cys-loop ligand-gated...    21   6.8  

>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 24.6 bits (51), Expect = 0.73
 Identities = 11/27 (40%), Positives = 17/27 (62%)
 Frame = +3

Query: 42  LKYFIKYLILNTFIFY*IELYI*W*PS 122
           L YFI+ + LNT+ F+  + +  W PS
Sbjct: 220 LNYFIEDIGLNTYYFFLRQAFPFWLPS 246


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 11/27 (40%), Positives = 17/27 (62%)
 Frame = +3

Query: 42  LKYFIKYLILNTFIFY*IELYI*W*PS 122
           L YFI+ + LNT+ F+  + +  W PS
Sbjct: 220 LIYFIEDIGLNTYYFFLRQAFPFWLPS 246


>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 22.2 bits (45), Expect = 3.9
 Identities = 10/22 (45%), Positives = 15/22 (68%), Gaps = 1/22 (4%)
 Frame = -3

Query: 164 ILINTHLMKVLLHRRRL-PLNV 102
           +L N H+ +VL+H R +  LNV
Sbjct: 660 VLSNIHVKEVLVHHREMEELNV 681


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 22.2 bits (45), Expect = 3.9
 Identities = 10/22 (45%), Positives = 15/22 (68%), Gaps = 1/22 (4%)
 Frame = -3

Query: 164 ILINTHLMKVLLHRRRL-PLNV 102
           +L N H+ +VL+H R +  LNV
Sbjct: 660 VLSNIHVKEVLVHHREMEELNV 681


>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 21.8 bits (44), Expect = 5.2
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = +3

Query: 279 VKHMQTKHTTNFGSK 323
           +KH+ T+H T  G K
Sbjct: 221 IKHINTRHNTKNGMK 235


>DQ667193-1|ABG75745.1|  510|Apis mellifera cys-loop ligand-gated
           ion channel subunit protein.
          Length = 510

 Score = 21.4 bits (43), Expect = 6.8
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = +1

Query: 313 LEARNRILTKFSAPVINGSC 372
           +E RN  + + S P+I GSC
Sbjct: 164 MELRNFPMDRQSCPLILGSC 183


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 146,554
Number of Sequences: 438
Number of extensions: 2914
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17237673
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)