Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte18g20
(484 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z84487-2|CAI42674.1| 2492|Homo sapiens alpha thalassemia/mental ... 33 0.70
Z84487-1|CAI42675.1| 2454|Homo sapiens alpha thalassemia/mental ... 33 0.70
U97103-1|AAC51657.1| 2375|Homo sapiens X-linked nuclear protein ... 33 0.70
U75653-1|AAC51655.1| 2492|Homo sapiens zinc finger helicase prot... 33 0.70
U72938-1|AAB49971.2| 2454|Homo sapiens putative DNA dependent AT... 33 0.70
U72937-1|AAB49970.2| 2492|Homo sapiens putative DNA dependent AT... 33 0.70
U72936-1|AAB49969.1| 2288|Homo sapiens putative DNA dependent AT... 33 0.70
U72935-3|AAB40700.1| 2288|Homo sapiens putative DNA dependent AT... 33 0.70
U72935-2|AAB40699.1| 2337|Homo sapiens putative DNA dependent AT... 33 0.70
U72935-1|AAB40698.1| 2375|Homo sapiens putative DNA dependent AT... 33 0.70
U09820-1|AAC50069.1| 1641|Homo sapiens helicase II protein. 33 0.70
L34363-1|AAA20872.1| 1298|Homo sapiens X-linked nuclear protein ... 33 0.70
EF467914-1|ABO43036.1| 2492|Homo sapiens alpha thalassemia/menta... 33 0.70
AL121874-2|CAI40710.1| 2492|Homo sapiens alpha thalassemia/menta... 33 0.70
AL121874-1|CAB90351.2| 2454|Homo sapiens alpha thalassemia/menta... 33 0.70
AL109753-2|CAI43115.1| 2492|Homo sapiens alpha thalassemia/menta... 33 0.70
AL109753-1|CAI43116.1| 2454|Homo sapiens alpha thalassemia/menta... 33 0.70
AB209545-1|BAD92782.1| 1224|Homo sapiens transcriptional regulat... 33 0.70
AB102641-1|BAC81110.1| 2492|Homo sapiens ATRX protein. 33 0.70
Z83689-1|CAB69660.1| 1211|Homo sapiens AF-4 protein. 32 0.92
L25050-1|AAA36642.1| 1206|Homo sapiens serine/proline-rich prote... 32 0.92
L22179-1|AAC37520.1| 2311|Homo sapiens MLL-AF4 der(11) fusion pr... 32 0.92
L13773-1|AAA58360.1| 1210|Homo sapiens AF-4 protein. 32 0.92
BC114930-1|AAI14931.1| 1211|Homo sapiens AF4/FMR2 family, member... 32 0.92
BC006104-1|AAH06104.2| 568|Homo sapiens RIO kinase 1 (yeast) pr... 32 0.92
AY094356-1|AAM15729.1| 95|Homo sapiens truncated hypothetical ... 32 0.92
AL139095-8|CAI16452.1| 561|Homo sapiens RIO kinase 1 (yeast) pr... 32 0.92
AL138878-4|CAH72013.1| 561|Homo sapiens RIO kinase 1 (yeast) pr... 32 0.92
AK054568-1|BAB70761.1| 530|Homo sapiens protein ( Homo sapiens ... 32 0.92
AF492832-1|AAM33379.1| 246|Homo sapiens MLL/AF4 fusion protein ... 32 0.92
AF177237-1|AAD56888.1| 149|Homo sapiens MLL/AF4 fusion protein ... 32 0.92
AF177236-1|AAD56887.1| 149|Homo sapiens MLL/AF4 fusion protein ... 32 0.92
AF031404-1|AAC14216.1| 246|Homo sapiens MLL-AF4 fusion protein ... 32 0.92
AF024541-1|AAC51815.1| 164|Homo sapiens MLL-AF4 fusion protein ... 32 0.92
AB208928-1|BAD92165.1| 1383|Homo sapiens transcriptional regulat... 32 0.92
BC110300-1|AAI10301.1| 335|Homo sapiens LARP2 protein protein. 29 8.6
AK092764-1|BAC03970.1| 575|Homo sapiens protein ( Homo sapiens ... 29 8.6
>Z84487-2|CAI42674.1| 2492|Homo sapiens alpha thalassemia/mental
retardation syndrome X-linked (RAD54 homolog, S. cerev
protein.
Length = 2492
Score = 32.7 bits (71), Expect = 0.70
Identities = 12/46 (26%), Positives = 25/46 (54%)
Frame = +1
Query: 334 SIPEPSSSQDENTKTKESVSPPIIIEELSDNMSRQHSGSMEDESEK 471
S+P D++ + ++ +++EE+ N+S GS +DE E+
Sbjct: 1253 SVPVTVDDDDDDNDPENRIAKKMLLEEIKANLSSDEDGSSDDEPEE 1298
>Z84487-1|CAI42675.1| 2454|Homo sapiens alpha thalassemia/mental
retardation syndrome X-linked (RAD54 homolog, S. cerev
protein.
Length = 2454
Score = 32.7 bits (71), Expect = 0.70
Identities = 12/46 (26%), Positives = 25/46 (54%)
Frame = +1
Query: 334 SIPEPSSSQDENTKTKESVSPPIIIEELSDNMSRQHSGSMEDESEK 471
S+P D++ + ++ +++EE+ N+S GS +DE E+
Sbjct: 1215 SVPVTVDDDDDDNDPENRIAKKMLLEEIKANLSSDEDGSSDDEPEE 1260
>U97103-1|AAC51657.1| 2375|Homo sapiens X-linked nuclear protein
protein.
Length = 2375
Score = 32.7 bits (71), Expect = 0.70
Identities = 12/46 (26%), Positives = 25/46 (54%)
Frame = +1
Query: 334 SIPEPSSSQDENTKTKESVSPPIIIEELSDNMSRQHSGSMEDESEK 471
S+P D++ + ++ +++EE+ N+S GS +DE E+
Sbjct: 1136 SVPVTVDDDDDDNDPENRIAKKMLLEEIKANLSSDEDGSSDDEPEE 1181
>U75653-1|AAC51655.1| 2492|Homo sapiens zinc finger helicase protein.
Length = 2492
Score = 32.7 bits (71), Expect = 0.70
Identities = 12/46 (26%), Positives = 25/46 (54%)
Frame = +1
Query: 334 SIPEPSSSQDENTKTKESVSPPIIIEELSDNMSRQHSGSMEDESEK 471
S+P D++ + ++ +++EE+ N+S GS +DE E+
Sbjct: 1253 SVPVTVDDDDDDNDPENRIAKKMLLEEIKANLSSDEDGSSDDEPEE 1298
>U72938-1|AAB49971.2| 2454|Homo sapiens putative DNA dependent ATPase
and helicase protein.
Length = 2454
Score = 32.7 bits (71), Expect = 0.70
Identities = 12/46 (26%), Positives = 25/46 (54%)
Frame = +1
Query: 334 SIPEPSSSQDENTKTKESVSPPIIIEELSDNMSRQHSGSMEDESEK 471
S+P D++ + ++ +++EE+ N+S GS +DE E+
Sbjct: 1215 SVPVTVDDDDDDNDPENRIAKKMLLEEIKANLSSDEDGSSDDEPEE 1260
>U72937-1|AAB49970.2| 2492|Homo sapiens putative DNA dependent ATPase
and helicase protein.
Length = 2492
Score = 32.7 bits (71), Expect = 0.70
Identities = 12/46 (26%), Positives = 25/46 (54%)
Frame = +1
Query: 334 SIPEPSSSQDENTKTKESVSPPIIIEELSDNMSRQHSGSMEDESEK 471
S+P D++ + ++ +++EE+ N+S GS +DE E+
Sbjct: 1253 SVPVTVDDDDDDNDPENRIAKKMLLEEIKANLSSDEDGSSDDEPEE 1298
>U72936-1|AAB49969.1| 2288|Homo sapiens putative DNA dependent ATPase
and helicase protein.
Length = 2288
Score = 32.7 bits (71), Expect = 0.70
Identities = 12/46 (26%), Positives = 25/46 (54%)
Frame = +1
Query: 334 SIPEPSSSQDENTKTKESVSPPIIIEELSDNMSRQHSGSMEDESEK 471
S+P D++ + ++ +++EE+ N+S GS +DE E+
Sbjct: 1049 SVPVTVDDDDDDNDPENRIAKKMLLEEIKANLSSDEDGSSDDEPEE 1094
>U72935-3|AAB40700.1| 2288|Homo sapiens putative DNA dependent ATPase
and helicase protein.
Length = 2288
Score = 32.7 bits (71), Expect = 0.70
Identities = 12/46 (26%), Positives = 25/46 (54%)
Frame = +1
Query: 334 SIPEPSSSQDENTKTKESVSPPIIIEELSDNMSRQHSGSMEDESEK 471
S+P D++ + ++ +++EE+ N+S GS +DE E+
Sbjct: 1049 SVPVTVDDDDDDNDPENRIAKKMLLEEIKANLSSDEDGSSDDEPEE 1094
>U72935-2|AAB40699.1| 2337|Homo sapiens putative DNA dependent ATPase
and helicase protein.
Length = 2337
Score = 32.7 bits (71), Expect = 0.70
Identities = 12/46 (26%), Positives = 25/46 (54%)
Frame = +1
Query: 334 SIPEPSSSQDENTKTKESVSPPIIIEELSDNMSRQHSGSMEDESEK 471
S+P D++ + ++ +++EE+ N+S GS +DE E+
Sbjct: 1098 SVPVTVDDDDDDNDPENRIAKKMLLEEIKANLSSDEDGSSDDEPEE 1143
>U72935-1|AAB40698.1| 2375|Homo sapiens putative DNA dependent ATPase
and helicase protein.
Length = 2375
Score = 32.7 bits (71), Expect = 0.70
Identities = 12/46 (26%), Positives = 25/46 (54%)
Frame = +1
Query: 334 SIPEPSSSQDENTKTKESVSPPIIIEELSDNMSRQHSGSMEDESEK 471
S+P D++ + ++ +++EE+ N+S GS +DE E+
Sbjct: 1136 SVPVTVDDDDDDNDPENRIAKKMLLEEIKANLSSDEDGSSDDEPEE 1181
>U09820-1|AAC50069.1| 1641|Homo sapiens helicase II protein.
Length = 1641
Score = 32.7 bits (71), Expect = 0.70
Identities = 12/46 (26%), Positives = 25/46 (54%)
Frame = +1
Query: 334 SIPEPSSSQDENTKTKESVSPPIIIEELSDNMSRQHSGSMEDESEK 471
S+P D++ + ++ +++EE+ N+S GS +DE E+
Sbjct: 394 SVPVTVDDDDDDNDPENRIAKKMLLEEIKANLSSDEDGSSDDEPEE 439
>L34363-1|AAA20872.1| 1298|Homo sapiens X-linked nuclear protein
protein.
Length = 1298
Score = 32.7 bits (71), Expect = 0.70
Identities = 12/46 (26%), Positives = 25/46 (54%)
Frame = +1
Query: 334 SIPEPSSSQDENTKTKESVSPPIIIEELSDNMSRQHSGSMEDESEK 471
S+P D++ + ++ +++EE+ N+S GS +DE E+
Sbjct: 134 SVPVTVDDDDDDNDPENRIAKKMLLEEIKANLSSDEDGSSDDEPEE 179
>EF467914-1|ABO43036.1| 2492|Homo sapiens alpha thalassemia/mental
retardation syndrome X-linked protein.
Length = 2492
Score = 32.7 bits (71), Expect = 0.70
Identities = 12/46 (26%), Positives = 25/46 (54%)
Frame = +1
Query: 334 SIPEPSSSQDENTKTKESVSPPIIIEELSDNMSRQHSGSMEDESEK 471
S+P D++ + ++ +++EE+ N+S GS +DE E+
Sbjct: 1253 SVPVTVDDDDDDNDPENRIAKKMLLEEIKANLSSDEDGSSDDEPEE 1298
>AL121874-2|CAI40710.1| 2492|Homo sapiens alpha thalassemia/mental
retardation syndrome X-linked (RAD54 homolog, S. cerev
protein.
Length = 2492
Score = 32.7 bits (71), Expect = 0.70
Identities = 12/46 (26%), Positives = 25/46 (54%)
Frame = +1
Query: 334 SIPEPSSSQDENTKTKESVSPPIIIEELSDNMSRQHSGSMEDESEK 471
S+P D++ + ++ +++EE+ N+S GS +DE E+
Sbjct: 1253 SVPVTVDDDDDDNDPENRIAKKMLLEEIKANLSSDEDGSSDDEPEE 1298
>AL121874-1|CAB90351.2| 2454|Homo sapiens alpha thalassemia/mental
retardation syndrome X-linked (RAD54 homolog, S. cerev
protein.
Length = 2454
Score = 32.7 bits (71), Expect = 0.70
Identities = 12/46 (26%), Positives = 25/46 (54%)
Frame = +1
Query: 334 SIPEPSSSQDENTKTKESVSPPIIIEELSDNMSRQHSGSMEDESEK 471
S+P D++ + ++ +++EE+ N+S GS +DE E+
Sbjct: 1215 SVPVTVDDDDDDNDPENRIAKKMLLEEIKANLSSDEDGSSDDEPEE 1260
>AL109753-2|CAI43115.1| 2492|Homo sapiens alpha thalassemia/mental
retardation syndrome X-linked (RAD54 homolog, S. cerev
protein.
Length = 2492
Score = 32.7 bits (71), Expect = 0.70
Identities = 12/46 (26%), Positives = 25/46 (54%)
Frame = +1
Query: 334 SIPEPSSSQDENTKTKESVSPPIIIEELSDNMSRQHSGSMEDESEK 471
S+P D++ + ++ +++EE+ N+S GS +DE E+
Sbjct: 1253 SVPVTVDDDDDDNDPENRIAKKMLLEEIKANLSSDEDGSSDDEPEE 1298
>AL109753-1|CAI43116.1| 2454|Homo sapiens alpha thalassemia/mental
retardation syndrome X-linked (RAD54 homolog, S. cerev
protein.
Length = 2454
Score = 32.7 bits (71), Expect = 0.70
Identities = 12/46 (26%), Positives = 25/46 (54%)
Frame = +1
Query: 334 SIPEPSSSQDENTKTKESVSPPIIIEELSDNMSRQHSGSMEDESEK 471
S+P D++ + ++ +++EE+ N+S GS +DE E+
Sbjct: 1215 SVPVTVDDDDDDNDPENRIAKKMLLEEIKANLSSDEDGSSDDEPEE 1260
>AB209545-1|BAD92782.1| 1224|Homo sapiens transcriptional regulator
ATRX isoform 1 variant protein.
Length = 1224
Score = 32.7 bits (71), Expect = 0.70
Identities = 12/46 (26%), Positives = 25/46 (54%)
Frame = +1
Query: 334 SIPEPSSSQDENTKTKESVSPPIIIEELSDNMSRQHSGSMEDESEK 471
S+P D++ + ++ +++EE+ N+S GS +DE E+
Sbjct: 550 SVPVTVDDDDDDNDPENRIAKKMLLEEIKANLSSDEDGSSDDEPEE 595
>AB102641-1|BAC81110.1| 2492|Homo sapiens ATRX protein.
Length = 2492
Score = 32.7 bits (71), Expect = 0.70
Identities = 12/46 (26%), Positives = 25/46 (54%)
Frame = +1
Query: 334 SIPEPSSSQDENTKTKESVSPPIIIEELSDNMSRQHSGSMEDESEK 471
S+P D++ + ++ +++EE+ N+S GS +DE E+
Sbjct: 1253 SVPVTVDDDDDDNDPENRIAKKMLLEEIKANLSSDEDGSSDDEPEE 1298
>Z83689-1|CAB69660.1| 1211|Homo sapiens AF-4 protein.
Length = 1211
Score = 32.3 bits (70), Expect = 0.92
Identities = 17/53 (32%), Positives = 25/53 (47%)
Frame = +1
Query: 325 IQCSIPEPSSSQDENTKTKESVSPPIIIEELSDNMSRQHSGSMEDESEKSDDN 483
+Q S E S S+ K S +PP + L + ++ HS S E ES D+
Sbjct: 427 LQLSDSEDSDSEQTPEKPPSSSAPPSAPQSLPEPVASAHSSSAESESTSDSDS 479
>L25050-1|AAA36642.1| 1206|Homo sapiens serine/proline-rich protein
protein.
Length = 1206
Score = 32.3 bits (70), Expect = 0.92
Identities = 17/53 (32%), Positives = 25/53 (47%)
Frame = +1
Query: 325 IQCSIPEPSSSQDENTKTKESVSPPIIIEELSDNMSRQHSGSMEDESEKSDDN 483
+Q S E S S+ K S +PP + L + ++ HS S E ES D+
Sbjct: 427 LQLSDSEDSDSEQTPEKPPSSSAPPSAPQSLPEPVASAHSSSAESESTSDSDS 479
>L22179-1|AAC37520.1| 2311|Homo sapiens MLL-AF4 der(11) fusion protein
protein.
Length = 2311
Score = 32.3 bits (70), Expect = 0.92
Identities = 17/53 (32%), Positives = 25/53 (47%)
Frame = +1
Query: 325 IQCSIPEPSSSQDENTKTKESVSPPIIIEELSDNMSRQHSGSMEDESEKSDDN 483
+Q S E S S+ K S +PP + L + ++ HS S E ES D+
Sbjct: 1528 LQLSDSEDSDSEQTPEKPPSSSAPPSAPQSLPEPVASAHSSSAESESTSDSDS 1580
>L13773-1|AAA58360.1| 1210|Homo sapiens AF-4 protein.
Length = 1210
Score = 32.3 bits (70), Expect = 0.92
Identities = 17/53 (32%), Positives = 25/53 (47%)
Frame = +1
Query: 325 IQCSIPEPSSSQDENTKTKESVSPPIIIEELSDNMSRQHSGSMEDESEKSDDN 483
+Q S E S S+ K S +PP + L + ++ HS S E ES D+
Sbjct: 427 LQLSDSEDSDSEQTPEKPPSSSAPPSAPQSLPEPVASAHSSSAESESTSDSDS 479
>BC114930-1|AAI14931.1| 1211|Homo sapiens AF4/FMR2 family, member 1
protein.
Length = 1211
Score = 32.3 bits (70), Expect = 0.92
Identities = 17/53 (32%), Positives = 25/53 (47%)
Frame = +1
Query: 325 IQCSIPEPSSSQDENTKTKESVSPPIIIEELSDNMSRQHSGSMEDESEKSDDN 483
+Q S E S S+ K S +PP + L + ++ HS S E ES D+
Sbjct: 427 LQLSDSEDSDSEQTPEKPPSSSAPPSAPQSLPEPVASAHSSSAESESTSDSDS 479
>BC006104-1|AAH06104.2| 568|Homo sapiens RIO kinase 1 (yeast)
protein.
Length = 568
Score = 32.3 bits (70), Expect = 0.92
Identities = 15/47 (31%), Positives = 27/47 (57%)
Frame = +1
Query: 343 EPSSSQDENTKTKESVSPPIIIEELSDNMSRQHSGSMEDESEKSDDN 483
+ S S++ + KT + I+ E+L DN++ G +EDE E+ D+
Sbjct: 20 DSSDSENRDLKTVKE-KDDILFEDLQDNVNENGEGEIEDEEEEGYDD 65
>AY094356-1|AAM15729.1| 95|Homo sapiens truncated hypothetical
protein AD034 protein.
Length = 95
Score = 32.3 bits (70), Expect = 0.92
Identities = 15/47 (31%), Positives = 27/47 (57%)
Frame = +1
Query: 343 EPSSSQDENTKTKESVSPPIIIEELSDNMSRQHSGSMEDESEKSDDN 483
+ S S++ + KT + I+ E+L DN++ G +EDE E+ D+
Sbjct: 20 DSSDSENRDLKTVKE-KDDILFEDLQDNVNENGEGEIEDEEEEGYDD 65
>AL139095-8|CAI16452.1| 561|Homo sapiens RIO kinase 1 (yeast)
protein.
Length = 561
Score = 32.3 bits (70), Expect = 0.92
Identities = 15/47 (31%), Positives = 27/47 (57%)
Frame = +1
Query: 343 EPSSSQDENTKTKESVSPPIIIEELSDNMSRQHSGSMEDESEKSDDN 483
+ S S++ + KT + I+ E+L DN++ G +EDE E+ D+
Sbjct: 13 DSSDSENRDLKTVKE-KDDILFEDLQDNVNENGEGEIEDEEEEGYDD 58
>AL138878-4|CAH72013.1| 561|Homo sapiens RIO kinase 1 (yeast)
protein.
Length = 561
Score = 32.3 bits (70), Expect = 0.92
Identities = 15/47 (31%), Positives = 27/47 (57%)
Frame = +1
Query: 343 EPSSSQDENTKTKESVSPPIIIEELSDNMSRQHSGSMEDESEKSDDN 483
+ S S++ + KT + I+ E+L DN++ G +EDE E+ D+
Sbjct: 13 DSSDSENRDLKTVKE-KDDILFEDLQDNVNENGEGEIEDEEEEGYDD 58
>AK054568-1|BAB70761.1| 530|Homo sapiens protein ( Homo sapiens
cDNA FLJ30006 fis, clone 3NB691000173. ).
Length = 530
Score = 32.3 bits (70), Expect = 0.92
Identities = 15/47 (31%), Positives = 27/47 (57%)
Frame = +1
Query: 343 EPSSSQDENTKTKESVSPPIIIEELSDNMSRQHSGSMEDESEKSDDN 483
+ S S++ + KT + I+ E+L DN++ G +EDE E+ D+
Sbjct: 20 DSSDSENRDLKTVKE-KDDILFEDLQDNVNENGEGEIEDEEEEGYDD 65
>AF492832-1|AAM33379.1| 246|Homo sapiens MLL/AF4 fusion protein
protein.
Length = 246
Score = 32.3 bits (70), Expect = 0.92
Identities = 17/53 (32%), Positives = 25/53 (47%)
Frame = +1
Query: 325 IQCSIPEPSSSQDENTKTKESVSPPIIIEELSDNMSRQHSGSMEDESEKSDDN 483
+Q S E S S+ K S +PP + L + ++ HS S E ES D+
Sbjct: 183 LQLSDSEDSDSEQTPEKPPSSSAPPSAPQSLPEPVASAHSSSAESESTSDSDS 235
>AF177237-1|AAD56888.1| 149|Homo sapiens MLL/AF4 fusion protein
protein.
Length = 149
Score = 32.3 bits (70), Expect = 0.92
Identities = 17/53 (32%), Positives = 25/53 (47%)
Frame = +1
Query: 325 IQCSIPEPSSSQDENTKTKESVSPPIIIEELSDNMSRQHSGSMEDESEKSDDN 483
+Q S E S S+ K S +PP + L + ++ HS S E ES D+
Sbjct: 86 LQLSDSEDSDSEQTPEKPPSSSAPPSAPQSLPEPVASAHSSSAESESTSDSDS 138
>AF177236-1|AAD56887.1| 149|Homo sapiens MLL/AF4 fusion protein
protein.
Length = 149
Score = 32.3 bits (70), Expect = 0.92
Identities = 17/53 (32%), Positives = 25/53 (47%)
Frame = +1
Query: 325 IQCSIPEPSSSQDENTKTKESVSPPIIIEELSDNMSRQHSGSMEDESEKSDDN 483
+Q S E S S+ K S +PP + L + ++ HS S E ES D+
Sbjct: 86 LQLSDSEDSDSEQTPEKPPSSSAPPSAPQSLPEPVASAHSSSAESESTSDSDS 138
>AF031404-1|AAC14216.1| 246|Homo sapiens MLL-AF4 fusion protein
protein.
Length = 246
Score = 32.3 bits (70), Expect = 0.92
Identities = 17/53 (32%), Positives = 25/53 (47%)
Frame = +1
Query: 325 IQCSIPEPSSSQDENTKTKESVSPPIIIEELSDNMSRQHSGSMEDESEKSDDN 483
+Q S E S S+ K S +PP + L + ++ HS S E ES D+
Sbjct: 183 LQLSDSEDSDSEQTPEKPPSSSAPPSAPQSLPEPVASAHSSSAESESTSDSDS 235
>AF024541-1|AAC51815.1| 164|Homo sapiens MLL-AF4 fusion protein
protein.
Length = 164
Score = 32.3 bits (70), Expect = 0.92
Identities = 17/53 (32%), Positives = 25/53 (47%)
Frame = +1
Query: 325 IQCSIPEPSSSQDENTKTKESVSPPIIIEELSDNMSRQHSGSMEDESEKSDDN 483
+Q S E S S+ K S +PP + L + ++ HS S E ES D+
Sbjct: 101 LQLSDSEDSDSEQTPEKPPSSSAPPSAPQSLPEPVASAHSSSAESESTSDSDS 153
>AB208928-1|BAD92165.1| 1383|Homo sapiens transcriptional regulator
ATRX isoform 2 variant protein.
Length = 1383
Score = 32.3 bits (70), Expect = 0.92
Identities = 12/46 (26%), Positives = 25/46 (54%)
Frame = +1
Query: 334 SIPEPSSSQDENTKTKESVSPPIIIEELSDNMSRQHSGSMEDESEK 471
S+P D++ + ++ +++EE+ N+S GS +DE E+
Sbjct: 1218 SVPVTVDDDDDDNDPENRIAKKMLLEEIKANLSPDEDGSSDDEPEE 1263
>BC110300-1|AAI10301.1| 335|Homo sapiens LARP2 protein protein.
Length = 335
Score = 29.1 bits (62), Expect = 8.6
Identities = 17/49 (34%), Positives = 25/49 (51%)
Frame = +1
Query: 70 LNTYINMDDDDGSGVNLSALNPTILNYYKKFGKKRDLEQYFSLSTAQGD 216
LNT + DDG+GV + + +L Y KR +E YFS+ + D
Sbjct: 191 LNTSMMYYYDDGTGVQVYPVEEALLKEY----IKRQIEYYFSVENLERD 235
>AK092764-1|BAC03970.1| 575|Homo sapiens protein ( Homo sapiens
cDNA FLJ35445 fis, clone SMINT2003551, weakly similar to
Drosophila melanogaster La related protein (larp) mRNA.
).
Length = 575
Score = 29.1 bits (62), Expect = 8.6
Identities = 17/49 (34%), Positives = 25/49 (51%)
Frame = +1
Query: 70 LNTYINMDDDDGSGVNLSALNPTILNYYKKFGKKRDLEQYFSLSTAQGD 216
LNT + DDG+GV + + +L Y KR +E YFS+ + D
Sbjct: 144 LNTSMMYYYDDGTGVQVYPVEEALLKEY----IKRQIEYYFSVENLERD 188
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 66,791,929
Number of Sequences: 237096
Number of extensions: 1252354
Number of successful extensions: 3054
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 2974
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3054
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 4327667848
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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