Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte18g12
         (614 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC039317-1|AAH39317.2|  484|Homo sapiens coiled-coil domain cont...    56   1e-07
AF382188-1|AAK60542.1|  484|Homo sapiens NYD-SP28 protein.             56   1e-07
AK093051-1|BAC04035.1|  484|Homo sapiens protein ( Homo sapiens ...    53   7e-07

>BC039317-1|AAH39317.2|  484|Homo sapiens coiled-coil domain
           containing 65 protein.
          Length = 484

 Score = 56.0 bits (129), Expect = 1e-07
 Identities = 31/117 (26%), Positives = 57/117 (48%)
 Frame = +1

Query: 259 REMAAQAMKKGEIDKTWKEMMLKIKEPVFKQDIEIMWHTFERAYDKKDHLIKYIIKLMNI 438
           +E    A+   +I+  W+ ++ ++K     +DIEI+  TFER  D KD++IK + K ++ 
Sbjct: 49  KEEHNSALNLNKINTQWRTVLREVKTRELHKDIEILSQTFERVVDCKDNVIKSLAKDLSE 108

Query: 439 ADDQFQRTVASFCDTIDTMIIKFLADLDGMSMENNSRTGALLKSGEVDAAKISTDHD 609
           A++Q+   + S    +D ++      L  +    N    AL K  E +   I   H+
Sbjct: 109 AEEQYAHALRSHLHNVDQLLALQRHRLSLLEESYNMELEALTKEFETERKTIIDQHE 165


>AF382188-1|AAK60542.1|  484|Homo sapiens NYD-SP28 protein.
          Length = 484

 Score = 56.0 bits (129), Expect = 1e-07
 Identities = 31/117 (26%), Positives = 57/117 (48%)
 Frame = +1

Query: 259 REMAAQAMKKGEIDKTWKEMMLKIKEPVFKQDIEIMWHTFERAYDKKDHLIKYIIKLMNI 438
           +E    A+   +I+  W+ ++ ++K     +DIEI+  TFER  D KD++IK + K ++ 
Sbjct: 49  KEEHNSALNLNKINTQWRTVLREVKTRELHKDIEILSQTFERVVDCKDNVIKSLAKDLSE 108

Query: 439 ADDQFQRTVASFCDTIDTMIIKFLADLDGMSMENNSRTGALLKSGEVDAAKISTDHD 609
           A++Q+   + S    +D ++      L  +    N    AL K  E +   I   H+
Sbjct: 109 AEEQYAHALRSHLHNVDQLLALQRHRLSLLEESYNMELEALTKEFETERKTIIDQHE 165


>AK093051-1|BAC04035.1|  484|Homo sapiens protein ( Homo sapiens
           cDNA FLJ35732 fis, clone TESTI2003141. ).
          Length = 484

 Score = 53.2 bits (122), Expect = 7e-07
 Identities = 30/112 (26%), Positives = 55/112 (49%)
 Frame = +1

Query: 259 REMAAQAMKKGEIDKTWKEMMLKIKEPVFKQDIEIMWHTFERAYDKKDHLIKYIIKLMNI 438
           +E    A+   +I+  W+ ++ ++K     +DIEI+  TFER  D KD++IK + K ++ 
Sbjct: 49  KEEHNSALNLNKINTQWRTVLREVKTRELHKDIEILSQTFERVVDCKDNVIKSLAKDLSE 108

Query: 439 ADDQFQRTVASFCDTIDTMIIKFLADLDGMSMENNSRTGALLKSGEVDAAKI 594
           A++Q+   + S    +D ++      L  +    N    AL K  E +   I
Sbjct: 109 AEEQYAHALRSHLHNVDQLLALQRHRLSLLEESYNMELEALTKEFETERKTI 160


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 69,462,588
Number of Sequences: 237096
Number of extensions: 1177265
Number of successful extensions: 2180
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2075
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2180
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6579110070
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)