Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte18g10
         (583 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF400226-1|AAL62061.1| 5171|Homo sapiens bullous pemphigoid anti...    30   5.2  
AK000295-1|BAA91063.1|  686|Homo sapiens protein ( Homo sapiens ...    29   9.1  

>AF400226-1|AAL62061.1| 5171|Homo sapiens bullous pemphigoid antigen 1
            eA protein.
          Length = 5171

 Score = 30.3 bits (65), Expect = 5.2
 Identities = 20/72 (27%), Positives = 39/72 (54%)
 Frame = +1

Query: 106  SVPLEKPGFDALNMTAPFMVQMNPDGKWNSCKPENLDEERLKAVVQYLVKSKAVAAAHSY 285
            S+   KP  D +N T P +++++P G+  S + + +  + L + ++  VK +AVA   + 
Sbjct: 3574 SIAEHKPHIDKMNKTGPQLLELSP-GEGFSIQEKYVAADTLYSQIKEDVKKRAVALDEA- 3631

Query: 286  CTQCTSGNQKND 321
             +Q T  + K D
Sbjct: 3632 ISQSTQFHDKID 3643


>AK000295-1|BAA91063.1|  686|Homo sapiens protein ( Homo sapiens
           cDNA FLJ20288 fis, clone HEP04414. ).
          Length = 686

 Score = 29.5 bits (63), Expect = 9.1
 Identities = 25/108 (23%), Positives = 49/108 (45%), Gaps = 4/108 (3%)
 Frame = +1

Query: 100 LASVPLEKPGFDALNMTAPFMVQMNPDGKWNSCKPENLDEERLKAV--VQYLVKSKAVAA 273
           + S  L+ P  + L++    + Q+ P  +  S +P+   +E   A+  VQ  V ++    
Sbjct: 163 VVSYLLDYPN-NVLSVPTTDVSQLPPPSQDQSQEPDRTSQENSPALLGVQKAVSTRVPTG 221

Query: 274 AHS--YCTQCTSGNQKNDSKSNYVPVIMMPIYPADQCPFDMDCEIKKN 411
           ++S    T+C +    + + SN     M P+YP+     D+D   + N
Sbjct: 222 SNSSSQTTECLTPESCSQTTSNVASQSMPPVYPS----VDVDAHTESN 265


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 68,502,545
Number of Sequences: 237096
Number of extensions: 1134473
Number of successful extensions: 2441
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2395
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2441
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 6042162242
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)