Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte18g09
(509 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF098505-2|AAC67416.2| 814|Caenorhabditis elegans Hypothetical ... 177 5e-45
Z70750-2|CAA94737.1| 756|Caenorhabditis elegans Hypothetical pr... 126 1e-29
AF098505-3|AAL27269.2| 578|Caenorhabditis elegans Hypothetical ... 64 6e-11
U55365-8|AAA98573.2| 383|Caenorhabditis elegans Hypothetical pr... 28 3.4
Z84574-5|CAB06541.1| 846|Caenorhabditis elegans Hypothetical pr... 27 6.0
U49941-1|AAB53872.1| 609|Caenorhabditis elegans Hypothetical pr... 27 6.0
AC024759-4|AAK68434.1| 356|Caenorhabditis elegans Hypothetical ... 27 7.9
AC006714-9|AAK29714.5| 430|Caenorhabditis elegans Patterned exp... 27 7.9
>AF098505-2|AAC67416.2| 814|Caenorhabditis elegans Hypothetical
protein Y71H10A.1a protein.
Length = 814
Score = 177 bits (430), Expect = 5e-45
Identities = 82/116 (70%), Positives = 97/116 (83%)
Frame = +3
Query: 162 KGKGLAVFTSGGDSQGMNAAVRSVVRMGIYLGCKVYFIREGYQGMVDGGDNIEEANWSSV 341
KG+ LA++TSGGDSQGMN+AVRS+ RM IY GCKVY I EGY+GM++GGD I+EA W++V
Sbjct: 44 KGRTLAIYTSGGDSQGMNSAVRSITRMAIYCGCKVYLIYEGYEGMIEGGDFIKEATWNTV 103
Query: 342 SSIIHKGGTIIGSARCMEFIKKEGRLKAAYNLVSRGITNLVVIGGDGSLTGANLFR 509
S II +GGTIIGSAR EF +EGRLKAA NL++RGI LV IGGDGSLTGAN FR
Sbjct: 104 SDIIQQGGTIIGSARSSEFRTREGRLKAATNLINRGIGRLVCIGGDGSLTGANTFR 159
Score = 64.1 bits (149), Expect = 6e-11
Identities = 35/101 (34%), Positives = 57/101 (56%)
Frame = +3
Query: 174 LAVFTSGGDSQGMNAAVRSVVRMGIYLGCKVYFIREGYQGMVDGGDNIEEANWSSVSSII 353
+AV G + GMNAAVRS VRM +Y C VY I + ++G+ +G + ++ WS V++
Sbjct: 437 VAVINVGAPAGGMNAAVRSYVRMALYHQCTVYGIEDSFEGLANG--SFKQFKWSDVTNWA 494
Query: 354 HKGGTIIGSARCMEFIKKEGRLKAAYNLVSRGITNLVVIGG 476
GG+ +G+ + + K +L A L I L+++GG
Sbjct: 495 MNGGSFLGTQKSLPTEKTMPQLAA--QLKKHNIQALLLVGG 533
>Z70750-2|CAA94737.1| 756|Caenorhabditis elegans Hypothetical
protein C50F4.2 protein.
Length = 756
Score = 126 bits (303), Expect = 1e-29
Identities = 63/112 (56%), Positives = 81/112 (72%)
Frame = +3
Query: 162 KGKGLAVFTSGGDSQGMNAAVRSVVRMGIYLGCKVYFIREGYQGMVDGGDNIEEANWSSV 341
K G+ V TSGGDSQGMNAAVRSVVR I G + Y IREGY G+++G NIE A W+ V
Sbjct: 9 KDHGVGVLTSGGDSQGMNAAVRSVVRETIRQGHRCYLIREGYNGLING--NIELAKWAHV 66
Query: 342 SSIIHKGGTIIGSARCMEFIKKEGRLKAAYNLVSRGITNLVVIGGDGSLTGA 497
+++ H GG++IG++RC EF +GR KAA + + I +L+VIGGDGSL GA
Sbjct: 67 ANVTHLGGSMIGTSRCDEFRTTDGRKKAAAIMFDKRIFHLIVIGGDGSLMGA 118
>AF098505-3|AAL27269.2| 578|Caenorhabditis elegans Hypothetical
protein Y71H10A.1b protein.
Length = 578
Score = 64.1 bits (149), Expect = 6e-11
Identities = 35/101 (34%), Positives = 57/101 (56%)
Frame = +3
Query: 174 LAVFTSGGDSQGMNAAVRSVVRMGIYLGCKVYFIREGYQGMVDGGDNIEEANWSSVSSII 353
+AV G + GMNAAVRS VRM +Y C VY I + ++G+ +G + ++ WS V++
Sbjct: 234 VAVINVGAPAGGMNAAVRSYVRMALYHQCTVYGIEDSFEGLANG--SFKQFKWSDVTNWA 291
Query: 354 HKGGTIIGSARCMEFIKKEGRLKAAYNLVSRGITNLVVIGG 476
GG+ +G+ + + K +L A L I L+++GG
Sbjct: 292 MNGGSFLGTQKSLPTEKTMPQLAA--QLKKHNIQALLLVGG 330
>U55365-8|AAA98573.2| 383|Caenorhabditis elegans Hypothetical
protein C12D5.2 protein.
Length = 383
Score = 28.3 bits (60), Expect = 3.4
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = -1
Query: 377 SNYSASFVNYRANRRPVRFFNVITSI 300
SN +F Y +R+ RFFN++TSI
Sbjct: 179 SNLDYNFKTYSPHRKQWRFFNLLTSI 204
>Z84574-5|CAB06541.1| 846|Caenorhabditis elegans Hypothetical
protein F33E2.6 protein.
Length = 846
Score = 27.5 bits (58), Expect = 6.0
Identities = 16/47 (34%), Positives = 19/47 (40%)
Frame = -2
Query: 307 PPSTMPWYPSRIKYTLHPKYMPIRTTDRTAAFIP*ESPPLVNTASPL 167
PP T P P T P +P ++ F P PP VN PL
Sbjct: 412 PPKTTP--PKTEPPTTEPPNIPYCWQQQSRLFAPSPPPPRVNNTMPL 456
>U49941-1|AAB53872.1| 609|Caenorhabditis elegans Hypothetical
protein K10B3.5 protein.
Length = 609
Score = 27.5 bits (58), Expect = 6.0
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +3
Query: 330 WSSVSSIIHKGGTIIGSARCMEFIKKEGRL 419
WS VSS + + G + G+ + E IKKE ++
Sbjct: 409 WSFVSSHLAQSGKLTGTTKDNETIKKEAKV 438
>AC024759-4|AAK68434.1| 356|Caenorhabditis elegans Hypothetical
protein Y37E11AR.4 protein.
Length = 356
Score = 27.1 bits (57), Expect = 7.9
Identities = 13/46 (28%), Positives = 21/46 (45%)
Frame = +3
Query: 234 VRMGIYLGCKVYFIREGYQGMVDGGDNIEEANWSSVSSIIHKGGTI 371
++ + LG K + +G DG + + E NW S + G TI
Sbjct: 165 IKWFVPLGLKKWMKNQGIGA--DGSNTVTELNWGESSEFVKNGKTI 208
>AC006714-9|AAK29714.5| 430|Caenorhabditis elegans Patterned
expression site protein 4 protein.
Length = 430
Score = 27.1 bits (57), Expect = 7.9
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = -2
Query: 499 LAPVSEPSPPITTRLVIP 446
L P S P PPIT R+++P
Sbjct: 143 LLPNSVPKPPITMRVIVP 160
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,248,023
Number of Sequences: 27780
Number of extensions: 224092
Number of successful extensions: 555
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 535
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 552
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 988489374
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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